EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000020586 (Gene tree)
Gene ID: 113025317
Gene Symbol: usb1
Alias: zgc:91896
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 4726 bases
Position: chr7:9369386-9374111
Accession: 113025317
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000030386	HVSL	PF09749.9	1.6e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000031095	-	846	-	ENSACLP00000030386	281 (aa)	XP_026028722	UPI000E3FEE28

Gene Model

Click here to download ENSACLG00000020586's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000020586's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000020586	usb1	80	53.540	ENSG00000103005	USB1	100	54.206	Homo_sapiens
ENSACLG00000020586	usb1	100	74.912	ENSAPOG00000011942	usb1	92	77.043	Acanthochromis_polyacanthus
ENSACLG00000020586	usb1	99	48.929	ENSAMEG00000017205	USB1	83	54.464	Ailuropoda_melanoleuca
ENSACLG00000020586	usb1	100	75.618	ENSACIG00000012234	usb1	83	86.161	Amphilophus_citrinellus
ENSACLG00000020586	usb1	99	78.169	ENSAOCG00000014831	usb1	99	76.868	Amphiprion_ocellaris
ENSACLG00000020586	usb1	99	77.465	ENSAPEG00000000296	usb1	99	76.157	Amphiprion_percula
ENSACLG00000020586	usb1	99	76.678	ENSATEG00000009348	usb1	99	74.558	Anabas_testudineus
ENSACLG00000020586	usb1	79	55.556	ENSAPLG00000002756	USB1	99	56.000	Anas_platyrhynchos
ENSACLG00000020586	usb1	79	51.542	ENSACAG00000015481	USB1	98	51.542	Anolis_carolinensis
ENSACLG00000020586	usb1	80	52.212	ENSANAG00000035640	USB1	94	49.398	Aotus_nancymaae
ENSACLG00000020586	usb1	99	54.167	ENSAMXG00000040146	usb1	83	57.371	Astyanax_mexicanus
ENSACLG00000020586	usb1	99	47.902	ENSBTAG00000015758	USB1	92	51.230	Bos_taurus
ENSACLG00000020586	usb1	80	53.097	ENSCJAG00000011733	USB1	94	50.201	Callithrix_jacchus
ENSACLG00000020586	usb1	99	48.746	ENSCAFG00000008556	USB1	71	48.746	Canis_familiaris
ENSACLG00000020586	usb1	99	48.387	ENSCAFG00020009263	USB1	84	53.363	Canis_lupus_dingo
ENSACLG00000020586	usb1	99	48.252	ENSCHIG00000024290	USB1	92	51.852	Capra_hircus
ENSACLG00000020586	usb1	79	52.679	ENSTSYG00000006997	USB1	85	52.679	Carlito_syrichta
ENSACLG00000020586	usb1	79	43.750	ENSCAPG00000009057	USB1	96	43.750	Cavia_aperea
ENSACLG00000020586	usb1	99	47.857	ENSCPOG00000014325	USB1	83	54.018	Cavia_porcellus
ENSACLG00000020586	usb1	80	52.655	ENSCCAG00000022132	USB1	94	49.799	Cebus_capucinus
ENSACLG00000020586	usb1	80	53.097	ENSCATG00000032174	USB1	94	50.201	Cercocebus_atys
ENSACLG00000020586	usb1	61	53.757	ENSCLAG00000007363	USB1	98	53.757	Chinchilla_lanigera
ENSACLG00000020586	usb1	80	53.097	ENSCSAG00000004783	USB1	94	50.201	Chlorocebus_sabaeus
ENSACLG00000020586	usb1	79	55.157	ENSCPBG00000026943	USB1	80	55.157	Chrysemys_picta_bellii
ENSACLG00000020586	usb1	80	30.043	ENSCSAVG00000000894	-	84	30.043	Ciona_savignyi
ENSACLG00000020586	usb1	80	52.655	ENSCANG00000037135	USB1	94	49.799	Colobus_angolensis_palliatus
ENSACLG00000020586	usb1	99	49.286	ENSCGRG00001011243	USB1	84	54.018	Cricetulus_griseus_chok1gshd
ENSACLG00000020586	usb1	99	49.286	ENSCGRG00000013252	USB1	84	54.018	Cricetulus_griseus_crigri
ENSACLG00000020586	usb1	99	65.836	ENSCSEG00000013881	usb1	88	69.835	Cynoglossus_semilaevis
ENSACLG00000020586	usb1	79	69.604	ENSCVAG00000009252	usb1	97	69.604	Cyprinodon_variegatus
ENSACLG00000020586	usb1	79	63.393	ENSDARG00000003841	usb1	81	63.393	Danio_rerio
ENSACLG00000020586	usb1	99	47.183	ENSDORG00000001888	Usb1	85	53.571	Dipodomys_ordii
ENSACLG00000020586	usb1	75	40.278	FBgn0037713	CG16790	81	40.278	Drosophila_melanogaster
ENSACLG00000020586	usb1	99	41.489	ENSETEG00000019682	USB1	94	42.629	Echinops_telfairi
ENSACLG00000020586	usb1	93	39.007	ENSEBUG00000005889	usb1	86	40.299	Eptatretus_burgeri
ENSACLG00000020586	usb1	99	47.857	ENSEASG00005005484	USB1	85	53.571	Equus_asinus_asinus
ENSACLG00000020586	usb1	99	47.670	ENSECAG00000019493	USB1	77	53.363	Equus_caballus
ENSACLG00000020586	usb1	61	49.711	ENSEEUG00000000154	USB1	65	49.711	Erinaceus_europaeus
ENSACLG00000020586	usb1	89	65.079	ENSELUG00000010974	usb1	92	65.079	Esox_lucius
ENSACLG00000020586	usb1	83	51.282	ENSFCAG00000002693	USB1	88	51.282	Felis_catus
ENSACLG00000020586	usb1	81	51.739	ENSFALG00000006876	USB1	92	49.796	Ficedula_albicollis
ENSACLG00000020586	usb1	99	48.214	ENSFDAG00000010052	USB1	84	53.571	Fukomys_damarensis
ENSACLG00000020586	usb1	88	63.492	ENSFHEG00000012334	usb1	88	66.818	Fundulus_heteroclitus
ENSACLG00000020586	usb1	79	71.749	ENSGMOG00000004228	usb1	100	71.749	Gadus_morhua
ENSACLG00000020586	usb1	79	54.709	ENSGALG00000035604	USB1	93	53.814	Gallus_gallus
ENSACLG00000020586	usb1	100	69.825	ENSGAFG00000021890	usb1	94	70.498	Gambusia_affinis
ENSACLG00000020586	usb1	88	74.000	ENSGACG00000003257	usb1	90	74.000	Gasterosteus_aculeatus
ENSACLG00000020586	usb1	99	50.000	ENSGAGG00000022572	USB1	82	54.709	Gopherus_agassizii
ENSACLG00000020586	usb1	80	53.540	ENSGGOG00000017147	USB1	94	50.602	Gorilla_gorilla
ENSACLG00000020586	usb1	100	97.865	ENSHBUG00000009823	usb1	100	97.865	Haplochromis_burtoni
ENSACLG00000020586	usb1	99	48.029	ENSHGLG00000016078	USB1	82	53.363	Heterocephalus_glaber_female
ENSACLG00000020586	usb1	99	48.029	ENSHGLG00100005562	USB1	82	53.363	Heterocephalus_glaber_male
ENSACLG00000020586	usb1	78	73.516	ENSHCOG00000015633	usb1	87	74.107	Hippocampus_comes
ENSACLG00000020586	usb1	99	53.793	ENSIPUG00000008601	usb1	78	63.111	Ictalurus_punctatus
ENSACLG00000020586	usb1	99	47.703	ENSSTOG00000007548	USB1	82	53.571	Ictidomys_tridecemlineatus
ENSACLG00000020586	usb1	99	49.286	ENSJJAG00000021859	Usb1	84	54.018	Jaculus_jaculus
ENSACLG00000020586	usb1	99	70.819	ENSKMAG00000007200	usb1	99	70.819	Kryptolebias_marmoratus
ENSACLG00000020586	usb1	90	69.261	ENSLBEG00000008452	usb1	79	70.518	Labrus_bergylta
ENSACLG00000020586	usb1	84	49.580	ENSLACG00000000105	USB1	66	57.812	Latimeria_chalumnae
ENSACLG00000020586	usb1	99	53.169	ENSLOCG00000000465	usb1	92	54.054	Lepisosteus_oculatus
ENSACLG00000020586	usb1	99	39.721	ENSLAFG00000002267	USB1	83	43.290	Loxodonta_africana
ENSACLG00000020586	usb1	80	53.097	ENSMFAG00000003926	USB1	94	50.201	Macaca_fascicularis
ENSACLG00000020586	usb1	80	53.097	ENSMMUG00000022669	USB1	94	50.201	Macaca_mulatta
ENSACLG00000020586	usb1	80	52.655	ENSMNEG00000042487	USB1	94	49.799	Macaca_nemestrina
ENSACLG00000020586	usb1	80	53.097	ENSMLEG00000028756	USB1	94	50.201	Mandrillus_leucophaeus
ENSACLG00000020586	usb1	99	72.143	ENSMAMG00000015092	usb1	99	70.714	Mastacembelus_armatus
ENSACLG00000020586	usb1	100	99.644	ENSMZEG00005010008	usb1	100	99.644	Maylandia_zebra
ENSACLG00000020586	usb1	99	48.399	ENSMAUG00000007832	Usb1	84	53.571	Mesocricetus_auratus
ENSACLG00000020586	usb1	79	53.571	ENSMICG00000004900	USB1	85	53.571	Microcebus_murinus
ENSACLG00000020586	usb1	99	50.357	ENSMOCG00000022647	Usb1	84	54.911	Microtus_ochrogaster
ENSACLG00000020586	usb1	80	75.893	ENSMMOG00000000490	usb1	87	75.893	Mola_mola
ENSACLG00000020586	usb1	86	48.606	ENSMODG00000014067	USB1	94	48.606	Monodelphis_domestica
ENSACLG00000020586	usb1	100	71.831	ENSMALG00000005930	usb1	100	72.183	Monopterus_albus
ENSACLG00000020586	usb1	99	48.571	MGP_CAROLIEiJ_G0031421	Usb1	99	50.000	Mus_caroli
ENSACLG00000020586	usb1	99	48.929	ENSMUSG00000031792	Usb1	99	50.000	Mus_musculus
ENSACLG00000020586	usb1	99	47.857	MGP_PahariEiJ_G0023019	Usb1	100	52.137	Mus_pahari
ENSACLG00000020586	usb1	99	48.929	MGP_SPRETEiJ_G0032540	Usb1	84	54.911	Mus_spretus
ENSACLG00000020586	usb1	99	48.214	ENSMPUG00000004684	USB1	80	53.125	Mustela_putorius_furo
ENSACLG00000020586	usb1	79	54.464	ENSMLUG00000007400	USB1	97	54.464	Myotis_lucifugus
ENSACLG00000020586	usb1	99	50.000	ENSNGAG00000009703	Usb1	90	50.584	Nannospalax_galili
ENSACLG00000020586	usb1	100	84.698	ENSNBRG00000008747	usb1	100	92.523	Neolamprologus_brichardi
ENSACLG00000020586	usb1	75	54.028	ENSNLEG00000003340	USB1	92	52.174	Nomascus_leucogenys
ENSACLG00000020586	usb1	99	49.821	ENSODEG00000016214	USB1	90	52.500	Octodon_degus
ENSACLG00000020586	usb1	99	95.000	ENSONIG00000011063	usb1	100	91.429	Oreochromis_niloticus
ENSACLG00000020586	usb1	79	53.333	ENSOANG00000012118	USB1	94	53.333	Ornithorhynchus_anatinus
ENSACLG00000020586	usb1	91	71.984	ENSORLG00000012479	usb1	95	71.429	Oryzias_latipes
ENSACLG00000020586	usb1	88	73.171	ENSORLG00020018671	usb1	96	70.656	Oryzias_latipes_hni
ENSACLG00000020586	usb1	91	71.984	ENSORLG00015009679	usb1	96	71.429	Oryzias_latipes_hsok
ENSACLG00000020586	usb1	100	70.819	ENSOMEG00000012930	usb1	100	70.463	Oryzias_melastigma
ENSACLG00000020586	usb1	79	50.000	ENSOGAG00000003273	USB1	94	46.586	Otolemur_garnettii
ENSACLG00000020586	usb1	84	51.440	ENSOARG00000001107	USB1	93	51.440	Ovis_aries
ENSACLG00000020586	usb1	80	53.097	ENSPPAG00000042137	USB1	94	50.201	Pan_paniscus
ENSACLG00000020586	usb1	83	50.855	ENSPPRG00000024797	USB1	88	50.855	Panthera_pardus
ENSACLG00000020586	usb1	83	50.427	ENSPTIG00000007506	USB1	88	50.427	Panthera_tigris_altaica
ENSACLG00000020586	usb1	76	54.206	ENSPTRG00000008172	USB1	100	54.206	Pan_troglodytes
ENSACLG00000020586	usb1	80	53.097	ENSPANG00000025138	USB1	94	50.201	Papio_anubis
ENSACLG00000020586	usb1	99	55.518	ENSPKIG00000015109	usb1	81	59.836	Paramormyrops_kingsleyae
ENSACLG00000020586	usb1	79	43.946	ENSPSIG00000004305	USB1	100	43.946	Pelodiscus_sinensis
ENSACLG00000020586	usb1	79	68.919	ENSPMGG00000017725	usb1	85	68.919	Periophthalmus_magnuspinnatus
ENSACLG00000020586	usb1	99	48.399	ENSPEMG00000016183	Usb1	89	49.027	Peromyscus_maniculatus_bairdii
ENSACLG00000020586	usb1	77	49.772	ENSPMAG00000000462	usb1	93	49.545	Petromyzon_marinus
ENSACLG00000020586	usb1	100	69.825	ENSPFOG00000011130	usb1	91	71.937	Poecilia_formosa
ENSACLG00000020586	usb1	100	69.825	ENSPLAG00000009820	usb1	91	71.937	Poecilia_latipinna
ENSACLG00000020586	usb1	100	70.175	ENSPMEG00000006402	usb1	91	72.332	Poecilia_mexicana
ENSACLG00000020586	usb1	88	68.651	ENSPREG00000001047	usb1	89	72.273	Poecilia_reticulata
ENSACLG00000020586	usb1	75	50.704	ENSPPYG00000007401	USB1	94	47.881	Pongo_abelii
ENSACLG00000020586	usb1	79	53.125	ENSPCOG00000022612	USB1	85	53.125	Propithecus_coquereli
ENSACLG00000020586	usb1	99	47.143	ENSPVAG00000004613	USB1	92	50.420	Pteropus_vampyrus
ENSACLG00000020586	usb1	100	97.509	ENSPNYG00000022262	usb1	100	97.509	Pundamilia_nyererei
ENSACLG00000020586	usb1	88	57.031	ENSPNAG00000011736	usb1	87	57.031	Pygocentrus_nattereri
ENSACLG00000020586	usb1	99	48.929	ENSRNOG00000013216	Usb1	84	54.911	Rattus_norvegicus
ENSACLG00000020586	usb1	80	50.000	ENSRBIG00000044466	USB1	100	53.738	Rhinopithecus_bieti
ENSACLG00000020586	usb1	80	53.097	ENSRROG00000029211	USB1	94	50.201	Rhinopithecus_roxellana
ENSACLG00000020586	usb1	80	53.097	ENSSBOG00000029362	USB1	94	49.799	Saimiri_boliviensis_boliviensis
ENSACLG00000020586	usb1	77	51.152	ENSSHAG00000006993	USB1	89	51.786	Sarcophilus_harrisii
ENSACLG00000020586	usb1	99	58.076	ENSSFOG00015023663	usb1	91	58.076	Scleropages_formosus
ENSACLG00000020586	usb1	100	68.896	ENSSMAG00000015834	usb1	100	68.013	Scophthalmus_maximus
ENSACLG00000020586	usb1	100	69.395	ENSSDUG00000002949	usb1	83	79.464	Seriola_dumerili
ENSACLG00000020586	usb1	100	75.000	ENSSLDG00000014174	usb1	90	78.571	Seriola_lalandi_dorsalis
ENSACLG00000020586	usb1	76	52.336	ENSSPUG00000006741	USB1	100	52.336	Sphenodon_punctatus
ENSACLG00000020586	usb1	99	75.175	ENSSPAG00000007484	usb1	99	73.427	Stegastes_partitus
ENSACLG00000020586	usb1	84	51.230	ENSSSCG00000002807	USB1	91	51.230	Sus_scrofa
ENSACLG00000020586	usb1	75	53.081	ENSTGUG00000004792	USB1	87	51.802	Taeniopygia_guttata
ENSACLG00000020586	usb1	99	68.929	ENSTRUG00000021069	usb1	92	72.984	Takifugu_rubripes
ENSACLG00000020586	usb1	99	58.571	ENSTNIG00000000626	usb1	83	66.816	Tetraodon_nigroviridis
ENSACLG00000020586	usb1	79	38.393	ENSTBEG00000001507	USB1	97	38.393	Tupaia_belangeri
ENSACLG00000020586	usb1	99	49.286	ENSUAMG00000016823	USB1	83	54.464	Ursus_americanus
ENSACLG00000020586	usb1	76	54.206	ENSUMAG00000021369	USB1	100	54.206	Ursus_maritimus
ENSACLG00000020586	usb1	99	48.387	ENSVVUG00000023700	USB1	92	51.046	Vulpes_vulpes
ENSACLG00000020586	usb1	75	55.399	ENSXETG00000013795	usb1	88	55.251	Xenopus_tropicalis
ENSACLG00000020586	usb1	89	72.727	ENSXMAG00000024687	usb1	75	72.727	Xiphophorus_maculatus