EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000020653 (Gene tree)
Gene ID: 113032970
Gene Symbol: ptcd3
Alias: fa08d08|wu:fa08d08|zgc:123014
Full Name: pentatricopeptide repeat domain 3
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 7939 bases
Position: chr2:19147969-19155907
Accession: 113032970
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000030492	PPR	PF01535.20	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000031205	-	2226	XM_026186174	ENSACLP00000030492	665 (aa)	XP_026041959	UPI000E426C02

Gene Model

Click here to download ENSACLG00000020653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000020653's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000020653	ptcd3	90	83.850	ENSACIG00000022263	ptcd3	100	83.850	Amphilophus_citrinellus
ENSACLG00000020653	ptcd3	100	78.829	ENSAOCG00000017186	ptcd3	98	78.829	Amphiprion_ocellaris
ENSACLG00000020653	ptcd3	100	78.979	ENSAPEG00000016069	ptcd3	98	78.979	Amphiprion_percula
ENSACLG00000020653	ptcd3	88	47.555	ENSAPLG00000005086	PTCD3	97	47.555	Anas_platyrhynchos
ENSACLG00000020653	ptcd3	100	58.832	ENSAMXG00000011570	ptcd3	100	58.832	Astyanax_mexicanus
ENSACLG00000020653	ptcd3	98	78.626	ENSCVAG00000020820	ptcd3	98	80.366	Cyprinodon_variegatus
ENSACLG00000020653	ptcd3	85	73.768	ENSGAFG00000015291	ptcd3	94	73.944	Gambusia_affinis
ENSACLG00000020653	ptcd3	100	99.699	ENSHBUG00000020056	ptcd3	100	99.699	Haplochromis_burtoni
ENSACLG00000020653	ptcd3	99	75.639	ENSLBEG00000015349	ptcd3	99	75.639	Labrus_bergylta
ENSACLG00000020653	ptcd3	100	99.699	ENSMZEG00005004980	ptcd3	100	99.699	Maylandia_zebra
ENSACLG00000020653	ptcd3	91	45.057	ENSMGAG00000013124	PTCD3	99	45.600	Meleagris_gallopavo
ENSACLG00000020653	ptcd3	100	76.048	ENSMALG00000013282	ptcd3	100	76.048	Monopterus_albus
ENSACLG00000020653	ptcd3	90	88.945	ENSNBRG00000000447	ptcd3	100	88.945	Neolamprologus_brichardi
ENSACLG00000020653	ptcd3	100	97.143	ENSONIG00000015886	ptcd3	100	97.143	Oreochromis_niloticus
ENSACLG00000020653	ptcd3	100	78.195	ENSORLG00000008776	ptcd3	100	79.141	Oryzias_latipes
ENSACLG00000020653	ptcd3	99	78.012	ENSORLG00020020676	ptcd3	99	78.797	Oryzias_latipes_hni
ENSACLG00000020653	ptcd3	87	63.516	ENSORLG00015015978	ptcd3	99	64.511	Oryzias_latipes_hsok
ENSACLG00000020653	ptcd3	98	74.387	ENSPFOG00000004442	ptcd3	100	74.387	Poecilia_formosa
ENSACLG00000020653	ptcd3	90	75.040	ENSPLAG00000021401	ptcd3	100	75.040	Poecilia_latipinna
ENSACLG00000020653	ptcd3	88	73.038	ENSPMEG00000007153	ptcd3	100	73.038	Poecilia_mexicana
ENSACLG00000020653	ptcd3	99	54.948	ENSSFOG00015019643	ptcd3	99	54.948	Scleropages_formosus
ENSACLG00000020653	ptcd3	80	52.134	ENSTGUG00000010760	PTCD3	100	52.134	Taeniopygia_guttata
ENSACLG00000020653	ptcd3	100	64.820	ENSTRUG00000003939	ptcd3	100	64.820	Takifugu_rubripes