EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000020812 (Gene tree)
Gene ID: 113033001
Gene Symbol: snx25
Alias: -
Full Name: sorting nexin 25
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 21538 bases
Position: chr2:19202914-19224451
Accession: 113033001
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000030934	Isy1	PF06246.12	0.00075	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000031656	-	2553	-	ENSACLP00000030934	850 (aa)	-	-
ENSACLT00000031541	-	3312	-	ENSACLP00000030824	997 (aa)	XP_026042009	UPI000E41AB98
ENSACLT00000031589	-	3309	-	ENSACLP00000030872	996 (aa)	-	-

Gene Model

Click here to download ENSACLG00000020812's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000020812's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000020812	snx25	96	96.822	ENSACIG00000022335	snx25	98	96.822	Amphilophus_citrinellus
ENSACLG00000020812	snx25	98	89.976	ENSCVAG00000020558	snx25	99	89.976	Cyprinodon_variegatus
ENSACLG00000020812	snx25	70	89.570	ENSGAFG00000015334	snx25	79	89.570	Gambusia_affinis
ENSACLG00000020812	snx25	100	99.176	ENSHBUG00000020302	snx25	100	99.176	Haplochromis_burtoni
ENSACLG00000020812	snx25	97	71.257	ENSIPUG00000020587	snx25	86	70.659	Ictalurus_punctatus
ENSACLG00000020812	snx25	97	93.124	ENSLBEG00000014990	snx25	100	92.280	Labrus_bergylta
ENSACLG00000020812	snx25	100	99.176	ENSMZEG00005005079	snx25	100	99.176	Maylandia_zebra
ENSACLG00000020812	snx25	97	90.253	ENSMALG00000013142	snx25	99	90.132	Monopterus_albus
ENSACLG00000020812	snx25	97	89.448	ENSPMEG00000007381	snx25	85	89.448	Poecilia_mexicana
ENSACLG00000020812	snx25	100	100.000	ENSPNYG00000000032	snx25	100	100.000	Pundamilia_nyererei
ENSACLG00000020812	snx25	97	69.305	ENSSFOG00015020775	SNX25	88	68.585	Scleropages_formosus
ENSACLG00000020812	snx25	97	92.289	ENSSMAG00000014099	snx25	99	91.446	Scophthalmus_maximus
ENSACLG00000020812	snx25	96	94.717	ENSSDUG00000014434	snx25	100	93.857	Seriola_dumerili
ENSACLG00000020812	snx25	97	90.373	ENSXMAG00000003919	snx25	99	90.373	Xiphophorus_maculatus