EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000020858 (Gene tree)
Gene ID: 113035768
Gene Symbol: prpf8
Alias: id:ibd1257|ik:tdsubc_2a9|im:7141966|tdsubc_2a9|wu:fb37c02|wu:fb73e06|xx:tdsubc_2a9|zgc:56504
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 14378 bases
Position: chr14:19397739-19412116
Accession: 113035768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000030957	RRM_4	PF10598.9	3.7e-48	1	1
ENSACLP00000031052	RRM_4	PF10598.9	3.9e-48	1	1
ENSACLP00000030957	U5_2-snRNA_bdg	PF10597.9	9e-74	1	1
ENSACLP00000031052	U5_2-snRNA_bdg	PF10597.9	9.3e-74	1	1
ENSACLP00000030957	PRO8NT	PF08082.11	2.3e-87	1	1
ENSACLP00000031052	PRO8NT	PF08082.11	2.3e-87	1	1
ENSACLP00000030957	U6-snRNA_bdg	PF10596.9	2.2e-89	1	1
ENSACLP00000031052	U6-snRNA_bdg	PF10596.9	2.3e-89	1	1
ENSACLP00000030957	PROCN	PF08083.11	6.1e-236	1	1
ENSACLP00000031052	PROCN	PF08083.11	6.2e-236	1	1
ENSACLP00000030957	PRP8_domainIV	PF12134.8	5.4e-130	1	1
ENSACLP00000031052	PRP8_domainIV	PF12134.8	5.5e-130	1	1
ENSACLP00000030957	PROCT	PF08084.11	3.9e-53	1	1
ENSACLP00000031052	PROCT	PF08084.11	4e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000031780	-	7062	XM_026191462	ENSACLP00000031052	2350 (aa)	XP_026047247	UPI0006CEDB34
ENSACLT00000031682	-	7178	-	ENSACLP00000030957	2308 (aa)	-	-

Gene Model

Click here to download ENSACLG00000020858's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000020858's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000020858	prpf8	100	97.447	ENSG00000174231	PRPF8	100	97.447	Homo_sapiens
ENSACLG00000020858	prpf8	100	98.979	ENSAPOG00000010079	prpf8	100	98.979	Acanthochromis_polyacanthus
ENSACLG00000020858	prpf8	100	97.447	ENSAMEG00000007940	PRPF8	100	97.447	Ailuropoda_melanoleuca
ENSACLG00000020858	prpf8	100	98.174	ENSACIG00000018280	prpf8	100	98.174	Amphilophus_citrinellus
ENSACLG00000020858	prpf8	100	98.936	ENSAOCG00000010725	prpf8	100	98.936	Amphiprion_ocellaris
ENSACLG00000020858	prpf8	100	98.936	ENSAPEG00000014397	prpf8	100	98.936	Amphiprion_percula
ENSACLG00000020858	prpf8	100	98.255	ENSATEG00000010062	prpf8	100	98.255	Anabas_testudineus
ENSACLG00000020858	prpf8	97	98.176	ENSAPLG00000010357	PRPF8	100	98.176	Anas_platyrhynchos
ENSACLG00000020858	prpf8	82	96.805	ENSACAG00000014784	PRPF8	100	96.142	Anolis_carolinensis
ENSACLG00000020858	prpf8	100	97.447	ENSANAG00000032629	PRPF8	100	97.447	Aotus_nancymaae
ENSACLG00000020858	prpf8	100	98.340	ENSAMXG00000020291	prpf8	100	98.340	Astyanax_mexicanus
ENSACLG00000020858	prpf8	100	97.447	ENSBTAG00000011488	PRPF8	100	97.447	Bos_taurus
ENSACLG00000020858	prpf8	99	86.872	WBGene00004187	prp-8	99	86.958	Caenorhabditis_elegans
ENSACLG00000020858	prpf8	100	97.447	ENSCJAG00000001911	PRPF8	100	97.447	Callithrix_jacchus
ENSACLG00000020858	prpf8	100	97.447	ENSCAFG00000019221	PRPF8	100	97.447	Canis_familiaris
ENSACLG00000020858	prpf8	97	98.304	ENSCAFG00020009943	PRPF8	100	98.304	Canis_lupus_dingo
ENSACLG00000020858	prpf8	100	97.447	ENSCHIG00000017499	PRPF8	100	97.447	Capra_hircus
ENSACLG00000020858	prpf8	100	97.447	ENSTSYG00000014120	PRPF8	100	97.447	Carlito_syrichta
ENSACLG00000020858	prpf8	97	96.080	ENSCAPG00000009459	PRPF8	99	96.080	Cavia_aperea
ENSACLG00000020858	prpf8	100	97.447	ENSCPOG00000010379	PRPF8	100	97.447	Cavia_porcellus
ENSACLG00000020858	prpf8	100	97.447	ENSCCAG00000031983	-	100	97.447	Cebus_capucinus
ENSACLG00000020858	prpf8	100	97.447	ENSCATG00000038595	PRPF8	100	97.447	Cercocebus_atys
ENSACLG00000020858	prpf8	100	97.447	ENSCLAG00000004388	PRPF8	100	97.447	Chinchilla_lanigera
ENSACLG00000020858	prpf8	100	97.447	ENSCSAG00000013929	PRPF8	100	97.447	Chlorocebus_sabaeus
ENSACLG00000020858	prpf8	81	97.333	ENSCHOG00000008590	PRPF8	88	97.333	Choloepus_hoffmanni
ENSACLG00000020858	prpf8	100	97.362	ENSCPBG00000020409	PRPF8	100	97.362	Chrysemys_picta_bellii
ENSACLG00000020858	prpf8	99	92.993	ENSCSAVG00000007825	-	100	91.323	Ciona_savignyi
ENSACLG00000020858	prpf8	100	97.447	ENSCANG00000043088	PRPF8	100	97.447	Colobus_angolensis_palliatus
ENSACLG00000020858	prpf8	74	99.213	ENSCGRG00000005129	Prpf8	100	99.213	Cricetulus_griseus_crigri
ENSACLG00000020858	prpf8	100	98.553	ENSCSEG00000007905	prpf8	100	98.553	Cynoglossus_semilaevis
ENSACLG00000020858	prpf8	100	98.553	ENSDARG00000026180	prpf8	100	98.553	Danio_rerio
ENSACLG00000020858	prpf8	93	98.457	ENSDNOG00000018471	PRPF8	99	97.531	Dasypus_novemcinctus
ENSACLG00000020858	prpf8	83	97.384	ENSDORG00000006185	Prpf8	96	95.997	Dipodomys_ordii
ENSACLG00000020858	prpf8	99	92.014	FBgn0033688	Prp8	97	91.922	Drosophila_melanogaster
ENSACLG00000020858	prpf8	100	92.128	ENSETEG00000017592	PRPF8	100	92.128	Echinops_telfairi
ENSACLG00000020858	prpf8	99	94.051	ENSEBUG00000006548	prpf8	99	94.051	Eptatretus_burgeri
ENSACLG00000020858	prpf8	100	97.447	ENSEASG00005009514	PRPF8	99	98.534	Equus_asinus_asinus
ENSACLG00000020858	prpf8	99	98.330	ENSECAG00000021318	PRPF8	100	98.330	Equus_caballus
ENSACLG00000020858	prpf8	67	98.519	ENSEEUG00000012120	-	67	98.519	Erinaceus_europaeus
ENSACLG00000020858	prpf8	98	97.913	ENSELUG00000007120	prpf8	99	97.261	Esox_lucius
ENSACLG00000020858	prpf8	100	97.447	ENSFCAG00000006297	PRPF8	100	97.447	Felis_catus
ENSACLG00000020858	prpf8	100	97.362	ENSFALG00000006628	PRPF8	100	97.362	Ficedula_albicollis
ENSACLG00000020858	prpf8	100	97.447	ENSFDAG00000004711	PRPF8	100	97.447	Fukomys_damarensis
ENSACLG00000020858	prpf8	100	98.383	ENSFHEG00000021084	prpf8	100	98.383	Fundulus_heteroclitus
ENSACLG00000020858	prpf8	100	96.128	ENSGMOG00000002028	prpf8	99	96.128	Gadus_morhua
ENSACLG00000020858	prpf8	100	97.489	ENSGALG00000002943	PRPF8	100	97.489	Gallus_gallus
ENSACLG00000020858	prpf8	99	99.001	ENSGAFG00000010337	prpf8	99	98.676	Gambusia_affinis
ENSACLG00000020858	prpf8	100	98.596	ENSGACG00000008504	prpf8	100	98.464	Gasterosteus_aculeatus
ENSACLG00000020858	prpf8	100	97.489	ENSGAGG00000008350	PRPF8	100	97.489	Gopherus_agassizii
ENSACLG00000020858	prpf8	100	97.447	ENSGGOG00000005516	PRPF8	100	97.447	Gorilla_gorilla
ENSACLG00000020858	prpf8	100	99.234	ENSHBUG00000016192	prpf8	100	99.234	Haplochromis_burtoni
ENSACLG00000020858	prpf8	100	97.447	ENSHGLG00000012029	PRPF8	100	97.447	Heterocephalus_glaber_female
ENSACLG00000020858	prpf8	100	97.447	ENSHGLG00100016494	PRPF8	100	97.447	Heterocephalus_glaber_male
ENSACLG00000020858	prpf8	100	98.468	ENSHCOG00000016414	prpf8	100	98.468	Hippocampus_comes
ENSACLG00000020858	prpf8	100	98.298	ENSIPUG00000023230	prpf8	100	98.298	Ictalurus_punctatus
ENSACLG00000020858	prpf8	100	97.447	ENSSTOG00000005128	PRPF8	100	97.447	Ictidomys_tridecemlineatus
ENSACLG00000020858	prpf8	100	95.319	ENSJJAG00000021159	Prpf8	100	95.319	Jaculus_jaculus
ENSACLG00000020858	prpf8	99	99.218	ENSKMAG00000016118	prpf8	100	98.762	Kryptolebias_marmoratus
ENSACLG00000020858	prpf8	100	98.511	ENSLBEG00000026903	prpf8	100	98.511	Labrus_bergylta
ENSACLG00000020858	prpf8	95	95.112	ENSLACG00000010479	PRPF8	99	98.213	Latimeria_chalumnae
ENSACLG00000020858	prpf8	99	99.045	ENSLOCG00000005409	prpf8	99	99.045	Lepisosteus_oculatus
ENSACLG00000020858	prpf8	100	97.447	ENSLAFG00000015445	PRPF8	100	97.447	Loxodonta_africana
ENSACLG00000020858	prpf8	100	97.447	ENSMFAG00000039995	PRPF8	100	97.447	Macaca_fascicularis
ENSACLG00000020858	prpf8	100	97.447	ENSMMUG00000004820	PRPF8	100	97.447	Macaca_mulatta
ENSACLG00000020858	prpf8	100	97.447	ENSMNEG00000035713	PRPF8	100	97.447	Macaca_nemestrina
ENSACLG00000020858	prpf8	100	97.447	ENSMLEG00000037937	PRPF8	100	97.447	Mandrillus_leucophaeus
ENSACLG00000020858	prpf8	100	98.809	ENSMAMG00000008919	prpf8	100	98.809	Mastacembelus_armatus
ENSACLG00000020858	prpf8	100	100.000	ENSMZEG00005015073	prpf8	100	100.000	Maylandia_zebra
ENSACLG00000020858	prpf8	100	97.489	ENSMGAG00000004769	PRPF8	100	97.489	Meleagris_gallopavo
ENSACLG00000020858	prpf8	100	97.447	ENSMICG00000010320	PRPF8	100	97.447	Microcebus_murinus
ENSACLG00000020858	prpf8	100	97.447	ENSMOCG00000016838	Prpf8	100	97.447	Microtus_ochrogaster
ENSACLG00000020858	prpf8	100	98.298	ENSMMOG00000011887	prpf8	100	98.298	Mola_mola
ENSACLG00000020858	prpf8	100	97.362	ENSMODG00000010480	PRPF8	100	97.362	Monodelphis_domestica
ENSACLG00000020858	prpf8	97	98.445	ENSMALG00000003558	prpf8	100	98.445	Monopterus_albus
ENSACLG00000020858	prpf8	100	97.404	MGP_CAROLIEiJ_G0016740	Prpf8	100	97.404	Mus_caroli
ENSACLG00000020858	prpf8	100	97.404	ENSMUSG00000020850	Prpf8	100	97.404	Mus_musculus
ENSACLG00000020858	prpf8	100	97.362	MGP_PahariEiJ_G0017877	Prpf8	100	97.362	Mus_pahari
ENSACLG00000020858	prpf8	100	97.404	MGP_SPRETEiJ_G0017583	Prpf8	100	97.404	Mus_spretus
ENSACLG00000020858	prpf8	100	97.447	ENSMPUG00000013227	PRPF8	100	97.447	Mustela_putorius_furo
ENSACLG00000020858	prpf8	100	97.323	ENSMLUG00000002666	PRPF8	100	97.323	Myotis_lucifugus
ENSACLG00000020858	prpf8	100	95.702	ENSNGAG00000005305	Prpf8	100	95.702	Nannospalax_galili
ENSACLG00000020858	prpf8	100	99.957	ENSNBRG00000013127	prpf8	100	99.957	Neolamprologus_brichardi
ENSACLG00000020858	prpf8	97	96.760	ENSNLEG00000000897	PRPF8	98	96.760	Nomascus_leucogenys
ENSACLG00000020858	prpf8	99	96.393	ENSMEUG00000015999	PRPF8	100	96.393	Notamacropus_eugenii
ENSACLG00000020858	prpf8	100	95.702	ENSOPRG00000003102	PRPF8	99	96.525	Ochotona_princeps
ENSACLG00000020858	prpf8	100	97.447	ENSODEG00000008468	PRPF8	100	97.447	Octodon_degus
ENSACLG00000020858	prpf8	100	99.872	ENSONIG00000008153	prpf8	100	99.872	Oreochromis_niloticus
ENSACLG00000020858	prpf8	83	99.065	ENSOANG00000004250	PRPF8	97	99.065	Ornithorhynchus_anatinus
ENSACLG00000020858	prpf8	100	97.447	ENSOCUG00000000081	PRPF8	100	97.447	Oryctolagus_cuniculus
ENSACLG00000020858	prpf8	100	98.641	ENSORLG00000008036	prpf8	100	98.889	Oryzias_latipes
ENSACLG00000020858	prpf8	100	98.599	ENSORLG00020021070	prpf8	100	98.599	Oryzias_latipes_hni
ENSACLG00000020858	prpf8	100	98.641	ENSORLG00015002340	prpf8	100	98.641	Oryzias_latipes_hsok
ENSACLG00000020858	prpf8	100	97.196	ENSOMEG00000016866	prpf8	100	97.196	Oryzias_melastigma
ENSACLG00000020858	prpf8	100	97.323	ENSOARG00000013312	PRPF8	100	97.323	Ovis_aries
ENSACLG00000020858	prpf8	100	97.447	ENSPPAG00000042753	PRPF8	100	97.447	Pan_paniscus
ENSACLG00000020858	prpf8	100	97.447	ENSPPRG00000008746	PRPF8	100	97.447	Panthera_pardus
ENSACLG00000020858	prpf8	100	97.362	ENSPTIG00000019200	PRPF8	100	97.362	Panthera_tigris_altaica
ENSACLG00000020858	prpf8	100	97.447	ENSPTRG00000039576	PRPF8	100	97.447	Pan_troglodytes
ENSACLG00000020858	prpf8	99	98.263	ENSPANG00000024607	PRPF8	98	98.306	Papio_anubis
ENSACLG00000020858	prpf8	100	98.596	ENSPKIG00000011201	prpf8	100	98.596	Paramormyrops_kingsleyae
ENSACLG00000020858	prpf8	100	97.319	ENSPSIG00000013393	PRPF8	100	97.319	Pelodiscus_sinensis
ENSACLG00000020858	prpf8	100	97.447	ENSPEMG00000021699	Prpf8	100	97.447	Peromyscus_maniculatus_bairdii
ENSACLG00000020858	prpf8	97	93.853	ENSPMAG00000005438	prpf8	100	93.898	Petromyzon_marinus
ENSACLG00000020858	prpf8	100	97.362	ENSPCIG00000022603	PRPF8	100	98.215	Phascolarctos_cinereus
ENSACLG00000020858	prpf8	100	98.643	ENSPFOG00000007005	prpf8	100	98.643	Poecilia_formosa
ENSACLG00000020858	prpf8	100	96.894	ENSPLAG00000020777	prpf8	100	96.894	Poecilia_latipinna
ENSACLG00000020858	prpf8	100	98.643	ENSPMEG00000004051	prpf8	100	98.643	Poecilia_mexicana
ENSACLG00000020858	prpf8	100	98.558	ENSPREG00000021902	prpf8	100	98.558	Poecilia_reticulata
ENSACLG00000020858	prpf8	100	97.447	ENSPPYG00000007777	PRPF8	100	97.447	Pongo_abelii
ENSACLG00000020858	prpf8	90	97.030	ENSPCAG00000008938	PRPF8	90	97.030	Procavia_capensis
ENSACLG00000020858	prpf8	100	97.447	ENSPCOG00000015182	PRPF8	100	97.447	Propithecus_coquereli
ENSACLG00000020858	prpf8	93	98.559	ENSPVAG00000002134	PRPF8	93	98.559	Pteropus_vampyrus
ENSACLG00000020858	prpf8	100	99.234	ENSPNYG00000016356	prpf8	100	99.234	Pundamilia_nyererei
ENSACLG00000020858	prpf8	100	98.383	ENSPNAG00000009247	prpf8	100	98.383	Pygocentrus_nattereri
ENSACLG00000020858	prpf8	100	97.404	ENSRNOG00000003495	Prpf8	100	97.404	Rattus_norvegicus
ENSACLG00000020858	prpf8	100	97.447	ENSRBIG00000031219	PRPF8	100	97.858	Rhinopithecus_bieti
ENSACLG00000020858	prpf8	100	97.447	ENSRROG00000038014	PRPF8	100	97.858	Rhinopithecus_roxellana
ENSACLG00000020858	prpf8	99	62.516	YHR165C	PRP8	95	62.559	Saccharomyces_cerevisiae
ENSACLG00000020858	prpf8	100	97.447	ENSSBOG00000029717	PRPF8	100	97.447	Saimiri_boliviensis_boliviensis
ENSACLG00000020858	prpf8	100	97.319	ENSSHAG00000006167	PRPF8	100	97.319	Sarcophilus_harrisii
ENSACLG00000020858	prpf8	100	98.340	ENSSFOG00015013905	prpf8	100	98.340	Scleropages_formosus
ENSACLG00000020858	prpf8	100	98.596	ENSSMAG00000017736	prpf8	100	98.596	Scophthalmus_maximus
ENSACLG00000020858	prpf8	100	98.936	ENSSDUG00000003029	prpf8	100	98.936	Seriola_dumerili
ENSACLG00000020858	prpf8	69	99.812	ENSSLDG00000017096	prpf8	100	99.812	Seriola_lalandi_dorsalis
ENSACLG00000020858	prpf8	87	96.178	ENSSARG00000002892	PRPF8	86	96.178	Sorex_araneus
ENSACLG00000020858	prpf8	100	97.319	ENSSPUG00000007463	PRPF8	100	97.319	Sphenodon_punctatus
ENSACLG00000020858	prpf8	100	98.383	ENSSPAG00000015639	prpf8	100	98.383	Stegastes_partitus
ENSACLG00000020858	prpf8	100	97.447	ENSSSCG00000017817	PRPF8	100	97.447	Sus_scrofa
ENSACLG00000020858	prpf8	52	98.778	ENSTGUG00000015597	-	95	98.778	Taeniopygia_guttata
ENSACLG00000020858	prpf8	100	97.362	ENSTGUG00000005648	-	100	97.362	Taeniopygia_guttata
ENSACLG00000020858	prpf8	100	98.468	ENSTRUG00000015906	prpf8	100	98.468	Takifugu_rubripes
ENSACLG00000020858	prpf8	95	99.582	ENSTNIG00000003460	prpf8	99	99.582	Tetraodon_nigroviridis
ENSACLG00000020858	prpf8	93	98.911	ENSTBEG00000006431	PRPF8	93	98.911	Tupaia_belangeri
ENSACLG00000020858	prpf8	100	96.894	ENSTTRG00000006869	PRPF8	100	96.894	Tursiops_truncatus
ENSACLG00000020858	prpf8	53	97.083	ENSUAMG00000015644	-	96	96.075	Ursus_americanus
ENSACLG00000020858	prpf8	100	97.191	ENSUMAG00000009385	PRPF8	100	97.191	Ursus_maritimus
ENSACLG00000020858	prpf8	71	98.621	ENSVPAG00000006063	-	71	98.621	Vicugna_pacos
ENSACLG00000020858	prpf8	100	97.447	ENSVVUG00000021695	PRPF8	99	97.447	Vulpes_vulpes
ENSACLG00000020858	prpf8	100	97.235	ENSXETG00000022259	prpf8	100	97.235	Xenopus_tropicalis
ENSACLG00000020858	prpf8	100	98.468	ENSXCOG00000012775	prpf8	100	98.468	Xiphophorus_couchianus
ENSACLG00000020858	prpf8	100	98.426	ENSXMAG00000008505	prpf8	100	98.426	Xiphophorus_maculatus