EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000021109 (Gene tree)
Gene ID: 113022896
Gene Symbol: si:dkey-13a21.4
Alias: zgc:110195
Full Name: ras-related protein rab7-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 4034 bases
Position: chr5:30028318-30032351
Accession: 113022896
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000031145	MMR_HSR1	PF01926.23	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000031877	-	1279	-	ENSACLP00000031145	206 (aa)	XP_026024601	UPI0003AF9CE0

Gene Model

Click here to download ENSACLG00000021109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000021109's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000021109	si:dkey-13a21.4	88	48.352	ENSACLG00000024456	-	86	48.352
ENSACLG00000021109	si:dkey-13a21.4	78	37.654	ENSACLG00000007644	rab1ab	78	37.654
ENSACLG00000021109	si:dkey-13a21.4	81	52.381	ENSACLG00000004795	rab9b	76	52.381
ENSACLG00000021109	si:dkey-13a21.4	79	34.146	ENSACLG00000002706	rab5c	79	33.146
ENSACLG00000021109	si:dkey-13a21.4	80	34.337	ENSACLG00000018262	rab25a	77	34.337
ENSACLG00000021109	si:dkey-13a21.4	80	33.133	ENSACLG00000004019	dnajc27	61	33.133
ENSACLG00000021109	si:dkey-13a21.4	93	30.583	ENSACLG00000005733	rab34b	77	30.583
ENSACLG00000021109	si:dkey-13a21.4	82	33.333	ENSACLG00000007076	rab11bb	76	33.333
ENSACLG00000021109	si:dkey-13a21.4	77	36.250	ENSACLG00000009468	RAB39B	74	36.250
ENSACLG00000021109	si:dkey-13a21.4	84	34.286	ENSACLG00000006329	-	80	34.286
ENSACLG00000021109	si:dkey-13a21.4	76	35.802	ENSACLG00000027590	-	73	35.802
ENSACLG00000021109	si:dkey-13a21.4	80	34.337	ENSACLG00000010251	rab25b	78	34.337
ENSACLG00000021109	si:dkey-13a21.4	73	31.126	ENSACLG00000009103	si:cabz01085950.1	73	31.126
ENSACLG00000021109	si:dkey-13a21.4	87	37.989	ENSACLG00000015289	rab18b	86	37.989
ENSACLG00000021109	si:dkey-13a21.4	79	34.146	ENSACLG00000008615	-	72	34.146
ENSACLG00000021109	si:dkey-13a21.4	85	33.333	ENSACLG00000026336	rab15	81	33.333
ENSACLG00000021109	si:dkey-13a21.4	86	34.078	ENSACLG00000018066	rab5aa	81	34.078
ENSACLG00000021109	si:dkey-13a21.4	76	38.365	ENSACLG00000007514	rab42a	72	38.365
ENSACLG00000021109	si:dkey-13a21.4	90	34.946	ENSACLG00000002819	rab23	77	34.409
ENSACLG00000021109	si:dkey-13a21.4	64	41.606	ENSACLG00000008602	RAB29	83	41.606
ENSACLG00000021109	si:dkey-13a21.4	78	37.037	ENSACLG00000013668	rab1ba	79	37.037
ENSACLG00000021109	si:dkey-13a21.4	73	37.821	ENSACLG00000010965	-	63	37.821
ENSACLG00000021109	si:dkey-13a21.4	75	34.615	ENSACLG00000001775	rab11a	72	34.615
ENSACLG00000021109	si:dkey-13a21.4	96	51.232	ENSACLG00000018847	RAB7A	97	51.232
ENSACLG00000021109	si:dkey-13a21.4	74	30.189	ENSACLG00000016163	rasl11b	63	30.189
ENSACLG00000021109	si:dkey-13a21.4	83	37.853	ENSACLG00000011484	rab18a	85	37.853
ENSACLG00000021109	si:dkey-13a21.4	99	34.762	ENSACLG00000025138	rab6ba	98	34.762
ENSACLG00000021109	si:dkey-13a21.4	94	36.816	ENSACLG00000027006	zgc:101559	83	36.816
ENSACLG00000021109	si:dkey-13a21.4	82	37.059	ENSACLG00000007696	rab12	68	37.059
ENSACLG00000021109	si:dkey-13a21.4	82	33.333	ENSACLG00000005446	-	76	33.333
ENSACLG00000021109	si:dkey-13a21.4	62	36.434	ENSACLG00000001218	RAB17	55	36.434
ENSACLG00000021109	si:dkey-13a21.4	96	50.249	ENSACLG00000024502	-	97	50.249
ENSACLG00000021109	si:dkey-13a21.4	80	34.118	ENSACLG00000000860	-	73	34.118
ENSACLG00000021109	si:dkey-13a21.4	82	32.164	ENSACLG00000018852	-	75	32.164
ENSACLG00000021109	si:dkey-13a21.4	71	31.293	ENSACLG00000011249	rras	79	32.075
ENSACLG00000021109	si:dkey-13a21.4	95	34.500	ENSACLG00000019423	rab41	92	34.500
ENSACLG00000021109	si:dkey-13a21.4	76	36.478	ENSACLG00000003898	rab32b	73	36.478
ENSACLG00000021109	si:dkey-13a21.4	85	38.983	ENSACLG00000019643	-	87	38.983
ENSACLG00000021109	si:dkey-13a21.4	85	40.113	ENSACLG00000023526	rab30	85	40.113
ENSACLG00000021109	si:dkey-13a21.4	83	30.994	ENSACLG00000025632	rabl2	73	30.994
ENSACLG00000021109	si:dkey-13a21.4	95	35.784	ENSACLG00000021547	rab33a	71	35.784
ENSACLG00000021109	si:dkey-13a21.4	95	33.831	ENSACLG00000026487	rab6bb	94	33.831
ENSACLG00000021109	si:dkey-13a21.4	77	32.500	ENSACLG00000007804	si:ch73-116o1.2	75	32.500
ENSACLG00000021109	si:dkey-13a21.4	57	33.898	ENSACLG00000014417	RAP2B	95	34.884
ENSACLG00000021109	si:dkey-13a21.4	87	32.787	ENSACLG00000005093	rab34a	67	32.787
ENSACLG00000021109	si:dkey-13a21.4	79	30.061	ENSACLG00000008646	rheb	86	30.061
ENSACLG00000021109	si:dkey-13a21.4	95	46.970	ENSACLG00000006647	rab9a	96	46.970
ENSACLG00000021109	si:dkey-13a21.4	81	37.500	ENSACLG00000018721	si:dkey-16l2.16	97	33.333
ENSACLG00000021109	si:dkey-13a21.4	72	38.667	ENSACLG00000005720	rab33ba	61	38.667
ENSACLG00000021109	si:dkey-13a21.4	78	37.654	ENSACLG00000003326	-	78	37.654
ENSACLG00000021109	si:dkey-13a21.4	95	31.250	ENSACLG00000013505	-	95	31.250
ENSACLG00000021109	si:dkey-13a21.4	85	33.333	ENSACLG00000001646	-	82	33.333
ENSACLG00000021109	si:dkey-13a21.4	78	39.506	ENSACLG00000013734	-	75	39.506
ENSACLG00000021109	si:dkey-13a21.4	78	33.333	ENSACLG00000010268	rab11al	75	33.333
ENSACLG00000021109	si:dkey-13a21.4	94	34.536	ENSACLG00000021470	rab22a	97	34.536
ENSACLG00000021109	si:dkey-13a21.4	76	35.802	ENSACLG00000022893	-	73	35.802
ENSACLG00000021109	si:dkey-13a21.4	82	33.918	ENSACLG00000005420	rab11ba	76	33.918

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000021109	si:dkey-13a21.4	99	91.667	ENSACIG00000011024	si:dkey-13a21.4	100	91.667	Amphilophus_citrinellus
ENSACLG00000021109	si:dkey-13a21.4	99	86.765	ENSAOCG00000020491	si:dkey-13a21.4	100	86.765	Amphiprion_ocellaris
ENSACLG00000021109	si:dkey-13a21.4	100	85.922	ENSAPEG00000023338	si:dkey-13a21.4	93	85.922	Amphiprion_percula
ENSACLG00000021109	si:dkey-13a21.4	99	84.314	ENSATEG00000014958	si:dkey-13a21.4	100	84.314	Anabas_testudineus
ENSACLG00000021109	si:dkey-13a21.4	95	51.795	ENSACAG00000012345	-	97	51.795	Anolis_carolinensis
ENSACLG00000021109	si:dkey-13a21.4	99	53.738	ENSAMXG00000032663	si:dkey-13a21.4	99	53.738	Astyanax_mexicanus
ENSACLG00000021109	si:dkey-13a21.4	88	56.284	WBGene00004271	rab-7	100	51.196	Caenorhabditis_elegans
ENSACLG00000021109	si:dkey-13a21.4	99	85.784	ENSCVAG00000001150	si:dkey-13a21.4	100	85.784	Cyprinodon_variegatus
ENSACLG00000021109	si:dkey-13a21.4	95	62.564	ENSDARG00000026098	si:dkey-13a21.4	95	62.564	Danio_rerio
ENSACLG00000021109	si:dkey-13a21.4	86	52.778	ENSDNOG00000043559	-	96	50.000	Dasypus_novemcinctus
ENSACLG00000021109	si:dkey-13a21.4	99	82.927	ENSFHEG00000002502	si:dkey-13a21.4	100	82.927	Fundulus_heteroclitus
ENSACLG00000021109	si:dkey-13a21.4	99	82.353	ENSGAFG00000020102	si:dkey-13a21.4	100	82.353	Gambusia_affinis
ENSACLG00000021109	si:dkey-13a21.4	100	99.515	ENSHBUG00000014023	si:dkey-13a21.4	100	99.515	Haplochromis_burtoni
ENSACLG00000021109	si:dkey-13a21.4	85	79.545	ENSKMAG00000021039	si:dkey-13a21.4	74	79.545	Kryptolebias_marmoratus
ENSACLG00000021109	si:dkey-13a21.4	99	84.804	ENSLBEG00000018180	si:dkey-13a21.4	100	84.804	Labrus_bergylta
ENSACLG00000021109	si:dkey-13a21.4	99	60.194	ENSLOCG00000014749	si:dkey-13a21.4	100	60.194	Lepisosteus_oculatus
ENSACLG00000021109	si:dkey-13a21.4	85	53.143	ENSLAFG00000028984	-	85	53.143	Loxodonta_africana
ENSACLG00000021109	si:dkey-13a21.4	99	85.784	ENSMAMG00000021095	si:dkey-13a21.4	100	85.784	Mastacembelus_armatus
ENSACLG00000021109	si:dkey-13a21.4	100	99.515	ENSMZEG00005010220	si:dkey-13a21.4	100	99.515	Maylandia_zebra
ENSACLG00000021109	si:dkey-13a21.4	100	97.087	ENSNBRG00000023214	si:dkey-13a21.4	100	97.087	Neolamprologus_brichardi
ENSACLG00000021109	si:dkey-13a21.4	99	98.039	ENSONIG00000020296	si:dkey-13a21.4	100	98.039	Oreochromis_niloticus
ENSACLG00000021109	si:dkey-13a21.4	99	80.882	ENSORLG00000025098	si:dkey-13a21.4	100	80.882	Oryzias_latipes
ENSACLG00000021109	si:dkey-13a21.4	99	80.392	ENSORLG00020019465	si:dkey-13a21.4	100	80.392	Oryzias_latipes_hni
ENSACLG00000021109	si:dkey-13a21.4	99	80.882	ENSORLG00015015121	si:dkey-13a21.4	100	80.882	Oryzias_latipes_hsok
ENSACLG00000021109	si:dkey-13a21.4	95	62.944	ENSPKIG00000008691	si:dkey-13a21.4	96	62.944	Paramormyrops_kingsleyae
ENSACLG00000021109	si:dkey-13a21.4	100	77.184	ENSPMGG00000023170	si:dkey-13a21.4	98	77.184	Periophthalmus_magnuspinnatus
ENSACLG00000021109	si:dkey-13a21.4	99	82.843	ENSPFOG00000015409	si:dkey-13a21.4	100	82.843	Poecilia_formosa
ENSACLG00000021109	si:dkey-13a21.4	99	82.843	ENSPLAG00000019688	si:dkey-13a21.4	100	82.843	Poecilia_latipinna
ENSACLG00000021109	si:dkey-13a21.4	99	82.843	ENSPMEG00000019159	si:dkey-13a21.4	100	82.843	Poecilia_mexicana
ENSACLG00000021109	si:dkey-13a21.4	99	82.353	ENSPREG00000022241	si:dkey-13a21.4	100	82.353	Poecilia_reticulata
ENSACLG00000021109	si:dkey-13a21.4	100	100.000	ENSPNYG00000018613	si:dkey-13a21.4	100	100.000	Pundamilia_nyererei
ENSACLG00000021109	si:dkey-13a21.4	99	44.286	YML001W	YPT7	100	44.286	Saccharomyces_cerevisiae
ENSACLG00000021109	si:dkey-13a21.4	95	63.265	ENSSFOG00015009566	si:dkey-13a21.4	96	63.265	Scleropages_formosus
ENSACLG00000021109	si:dkey-13a21.4	100	81.553	ENSSMAG00000013945	si:dkey-13a21.4	100	81.553	Scophthalmus_maximus
ENSACLG00000021109	si:dkey-13a21.4	99	90.196	ENSSDUG00000019738	si:dkey-13a21.4	100	90.196	Seriola_dumerili
ENSACLG00000021109	si:dkey-13a21.4	99	89.706	ENSSLDG00000011597	si:dkey-13a21.4	100	89.706	Seriola_lalandi_dorsalis
ENSACLG00000021109	si:dkey-13a21.4	95	50.769	ENSXETG00000014257	mgc75872	97	50.769	Xenopus_tropicalis