EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000021394 (Gene tree)
Gene ID: 113031831
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 11759 bases
Position: chr11:21588055-21599813
Accession: 113031831
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000031535	Fox-1_C	PF12414.8	9.3e-33	1	1
ENSACLP00000031576	Fox-1_C	PF12414.8	1.3e-32	1	1
ENSACLP00000031535	RRM_1	PF00076.22	1e-17	1	1
ENSACLP00000031576	RRM_1	PF00076.22	1.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000032319	-	1248	-	ENSACLP00000031576	415 (aa)	-	-
ENSACLT00000032276	-	1143	-	ENSACLP00000031535	380 (aa)	XP_026040071	UPI000329A7BD

Gene Model

Click here to download ENSACLG00000021394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000021394's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000021394	rbfox1l	63	61.832	ENSACLG00000017380	-	63	61.597
ENSACLG00000021394	rbfox1l	63	62.548	ENSACLG00000009744	rbfox2	56	62.791
ENSACLG00000021394	rbfox1l	96	51.042	ENSACLG00000025552	-	60	71.681
ENSACLG00000021394	rbfox1l	100	54.499	ENSACLG00000020011	rbfox3b	70	72.124

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000021394	rbfox1l	97	89.218	ENSAPOG00000016304	rbfox1l	98	87.601	Acanthochromis_polyacanthus
ENSACLG00000021394	rbfox1l	100	86.877	ENSACIG00000006441	rbfox1l	100	86.877	Amphilophus_citrinellus
ENSACLG00000021394	rbfox1l	83	84.906	ENSAOCG00000020938	rbfox1l	99	83.680	Amphiprion_ocellaris
ENSACLG00000021394	rbfox1l	100	89.556	ENSAPEG00000008232	rbfox1l	100	87.990	Amphiprion_percula
ENSACLG00000021394	rbfox1l	100	85.640	ENSATEG00000022649	rbfox1l	100	85.640	Anabas_testudineus
ENSACLG00000021394	rbfox1l	64	72.112	ENSACAG00000011931	-	89	73.577	Anolis_carolinensis
ENSACLG00000021394	rbfox1l	100	85.233	ENSAMXG00000010470	rbfox1l	100	84.974	Astyanax_mexicanus
ENSACLG00000021394	rbfox1l	100	54.061	ENSCPBG00000010944	-	100	55.725	Chrysemys_picta_bellii
ENSACLG00000021394	rbfox1l	100	86.458	ENSCSEG00000018898	rbfox1l	100	86.719	Cynoglossus_semilaevis
ENSACLG00000021394	rbfox1l	100	87.990	ENSCVAG00000007986	rbfox1l	100	86.945	Cyprinodon_variegatus
ENSACLG00000021394	rbfox1l	100	83.420	ENSDARG00000021184	rbfox1l	100	83.679	Danio_rerio
ENSACLG00000021394	rbfox1l	100	81.679	ENSELUG00000015077	rbfox1l	100	83.206	Esox_lucius
ENSACLG00000021394	rbfox1l	79	85.366	ENSFHEG00000016557	rbfox1l	95	85.366	Fundulus_heteroclitus
ENSACLG00000021394	rbfox1l	100	82.507	ENSGMOG00000005040	rbfox1l	100	82.507	Gadus_morhua
ENSACLG00000021394	rbfox1l	92	87.853	ENSGAFG00000013211	rbfox1l	99	86.944	Gambusia_affinis
ENSACLG00000021394	rbfox1l	100	87.990	ENSGACG00000010757	rbfox1l	100	87.990	Gasterosteus_aculeatus
ENSACLG00000021394	rbfox1l	65	68.254	ENSGAGG00000012440	-	84	72.016	Gopherus_agassizii
ENSACLG00000021394	rbfox1l	100	100.000	ENSHBUG00000013406	rbfox1l	100	100.000	Haplochromis_burtoni
ENSACLG00000021394	rbfox1l	100	84.115	ENSHCOG00000020771	rbfox1l	100	84.375	Hippocampus_comes
ENSACLG00000021394	rbfox1l	99	77.105	ENSIPUG00000000065	rbfox1l	99	78.371	Ictalurus_punctatus
ENSACLG00000021394	rbfox1l	100	87.273	ENSKMAG00000005146	rbfox1l	100	87.532	Kryptolebias_marmoratus
ENSACLG00000021394	rbfox1l	100	90.339	ENSLBEG00000017089	rbfox1l	100	90.339	Labrus_bergylta
ENSACLG00000021394	rbfox1l	100	90.078	ENSMAMG00000019480	rbfox1l	100	90.078	Mastacembelus_armatus
ENSACLG00000021394	rbfox1l	100	100.000	ENSMZEG00005016374	rbfox1l	100	100.000	Maylandia_zebra
ENSACLG00000021394	rbfox1l	100	88.512	ENSMMOG00000016530	rbfox1l	100	88.512	Mola_mola
ENSACLG00000021394	rbfox1l	100	85.640	ENSMALG00000009384	rbfox1l	100	85.640	Monopterus_albus
ENSACLG00000021394	rbfox1l	100	98.421	ENSNBRG00000003346	rbfox1l	100	98.421	Neolamprologus_brichardi
ENSACLG00000021394	rbfox1l	100	99.211	ENSONIG00000012754	rbfox1l	100	99.211	Oreochromis_niloticus
ENSACLG00000021394	rbfox1l	100	87.467	ENSORLG00000011269	rbfox1l	100	85.901	Oryzias_latipes
ENSACLG00000021394	rbfox1l	100	88.251	ENSORLG00020000162	rbfox1l	100	86.684	Oryzias_latipes_hni
ENSACLG00000021394	rbfox1l	100	88.251	ENSORLG00015013464	rbfox1l	100	86.684	Oryzias_latipes_hsok
ENSACLG00000021394	rbfox1l	100	88.773	ENSOMEG00000010584	rbfox1l	100	87.206	Oryzias_melastigma
ENSACLG00000021394	rbfox1l	100	86.458	ENSPKIG00000012029	rbfox1l	100	86.458	Paramormyrops_kingsleyae
ENSACLG00000021394	rbfox1l	100	80.208	ENSPMGG00000012082	rbfox1l	100	79.688	Periophthalmus_magnuspinnatus
ENSACLG00000021394	rbfox1l	100	88.512	ENSPFOG00000009338	rbfox1l	100	88.512	Poecilia_formosa
ENSACLG00000021394	rbfox1l	85	79.817	ENSPLAG00000012816	rbfox1l	99	79.817	Poecilia_latipinna
ENSACLG00000021394	rbfox1l	100	84.595	ENSPMEG00000017597	rbfox1l	100	84.595	Poecilia_mexicana
ENSACLG00000021394	rbfox1l	100	84.595	ENSPREG00000007940	rbfox1l	100	84.595	Poecilia_reticulata
ENSACLG00000021394	rbfox1l	100	99.211	ENSPNYG00000002098	rbfox1l	100	99.211	Pundamilia_nyererei
ENSACLG00000021394	rbfox1l	100	84.755	ENSPNAG00000001620	rbfox1l	100	84.238	Pygocentrus_nattereri
ENSACLG00000021394	rbfox1l	100	82.597	ENSSFOG00015000675	rbfox1l	100	82.857	Scleropages_formosus
ENSACLG00000021394	rbfox1l	100	87.728	ENSSMAG00000013090	rbfox1l	100	88.140	Scophthalmus_maximus
ENSACLG00000021394	rbfox1l	100	87.147	ENSSDUG00000008705	rbfox1l	100	86.889	Seriola_dumerili
ENSACLG00000021394	rbfox1l	100	87.371	ENSSLDG00000022256	rbfox1l	100	87.113	Seriola_lalandi_dorsalis
ENSACLG00000021394	rbfox1l	100	90.339	ENSSPAG00000016620	rbfox1l	100	88.773	Stegastes_partitus
ENSACLG00000021394	rbfox1l	96	83.784	ENSTRUG00000015905	rbfox1l	100	84.054	Takifugu_rubripes
ENSACLG00000021394	rbfox1l	64	80.297	ENSTNIG00000008088	rbfox1l	97	82.443	Tetraodon_nigroviridis
ENSACLG00000021394	rbfox1l	100	88.512	ENSXMAG00000023471	rbfox1l	100	88.512	Xiphophorus_maculatus