EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000021587 (Gene tree)
Gene ID: 113020584
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 239-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 2012 bases
Position: chr4:11389376-11391387
Accession: 113020584
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000031829	zf-C2H2	PF00096.26	4.5e-17	1	4
ENSACLP00000031829	zf-C2H2	PF00096.26	4.5e-17	2	4
ENSACLP00000031829	zf-C2H2	PF00096.26	4.5e-17	3	4
ENSACLP00000031829	zf-C2H2	PF00096.26	4.5e-17	4	4
ENSACLP00000031829	zf-met	PF12874.7	1.5e-07	1	3
ENSACLP00000031829	zf-met	PF12874.7	1.5e-07	2	3
ENSACLP00000031829	zf-met	PF12874.7	1.5e-07	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000032574	-	1395	-	ENSACLP00000031829	464 (aa)	XP_026020451	UPI000E400C09

Gene Model

Click here to download ENSACLG00000021587's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000021587's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000021587	-	52	39.597	ENSACLG00000022505	-	93	39.597
ENSACLG00000021587	-	69	40.000	ENSACLG00000020393	-	89	44.030
ENSACLG00000021587	-	61	49.438	ENSACLG00000024308	-	94	51.136
ENSACLG00000021587	-	50	36.496	ENSACLG00000017487	-	75	36.496
ENSACLG00000021587	-	56	47.191	ENSACLG00000017939	-	90	42.276
ENSACLG00000021587	-	52	35.119	ENSACLG00000019094	-	88	35.135

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000021587	-	73	39.831	ENSAOCG00000000463	-	55	39.831	Amphiprion_ocellaris
ENSACLG00000021587	-	50	33.582	ENSAPEG00000011635	-	76	39.855	Amphiprion_percula
ENSACLG00000021587	-	54	37.584	ENSATEG00000011235	-	63	37.584	Anabas_testudineus
ENSACLG00000021587	-	100	99.569	ENSHBUG00000003299	-	100	99.569	Haplochromis_burtoni
ENSACLG00000021587	-	61	36.667	ENSIPUG00000009577	-	73	36.667	Ictalurus_punctatus
ENSACLG00000021587	-	100	99.570	ENSMZEG00005013916	-	100	99.570	Maylandia_zebra
ENSACLG00000021587	-	53	33.987	ENSPMEG00000023113	-	59	36.242	Poecilia_mexicana
ENSACLG00000021587	-	50	36.364	ENSPREG00000004006	-	54	33.333	Poecilia_reticulata
ENSACLG00000021587	-	100	98.925	ENSPNYG00000007907	-	100	99.160	Pundamilia_nyererei