EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000021840 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 1401 bases
Position: chr14:38001003-38002403
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000032192	zf-CCHC	PF00098.23	8.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000032954	-	1401	-	ENSACLP00000032192	466 (aa)	-	-

Gene Model

Click here to download ENSACLG00000021840's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000021840's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000021840	-	83	81.701	ENSACLG00000010385	-	76	81.701
ENSACLG00000021840	-	100	98.712	ENSACLG00000001645	-	98	98.712
ENSACLG00000021840	-	86	98.010	ENSACLG00000003667	-	87	98.010

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000021840	-	96	60.579	ENSAPOG00000020332	-	92	61.693	Acanthochromis_polyacanthus
ENSACLG00000021840	-	100	67.811	ENSAOCG00000022423	-	94	67.811	Amphiprion_ocellaris
ENSACLG00000021840	-	100	70.386	ENSAOCG00000003063	-	100	70.386	Amphiprion_ocellaris
ENSACLG00000021840	-	98	34.232	ENSAOCG00000006827	-	87	34.232	Amphiprion_ocellaris
ENSACLG00000021840	-	100	67.597	ENSAOCG00000006786	-	94	67.597	Amphiprion_ocellaris
ENSACLG00000021840	-	100	67.811	ENSAOCG00000007145	-	94	67.811	Amphiprion_ocellaris
ENSACLG00000021840	-	98	34.232	ENSAOCG00000006321	-	87	34.232	Amphiprion_ocellaris
ENSACLG00000021840	-	99	69.462	ENSAPEG00000021094	-	65	69.462	Amphiprion_percula
ENSACLG00000021840	-	98	34.490	ENSAPEG00000022462	-	95	34.490	Amphiprion_percula
ENSACLG00000021840	-	97	30.237	ENSAMXG00000043621	-	66	30.237	Astyanax_mexicanus
ENSACLG00000021840	-	98	31.600	ENSGAFG00000002139	-	70	31.800	Gambusia_affinis
ENSACLG00000021840	-	100	92.489	ENSMZEG00005027320	-	100	92.489	Maylandia_zebra
ENSACLG00000021840	-	100	99.142	ENSMZEG00005020406	-	100	99.142	Maylandia_zebra
ENSACLG00000021840	-	96	33.038	ENSMZEG00005008163	-	93	33.038	Maylandia_zebra
ENSACLG00000021840	-	97	31.453	ENSMALG00000016043	PNMA5	91	31.453	Monopterus_albus
ENSACLG00000021840	-	66	30.284	ENSORLG00000027063	-	56	30.284	Oryzias_latipes
ENSACLG00000021840	-	61	33.667	ENSORLG00020001817	-	82	33.667	Oryzias_latipes_hni
ENSACLG00000021840	-	59	46.909	ENSPKIG00000019666	-	61	46.909	Paramormyrops_kingsleyae
ENSACLG00000021840	-	58	33.942	ENSPSIG00000014432	-	93	33.942	Pelodiscus_sinensis
ENSACLG00000021840	-	98	31.855	ENSPFOG00000023145	-	84	32.064	Poecilia_formosa
ENSACLG00000021840	-	96	30.629	ENSPNAG00000011953	-	95	31.663	Pygocentrus_nattereri
ENSACLG00000021840	-	71	34.211	ENSPNAG00000000816	-	74	34.211	Pygocentrus_nattereri
ENSACLG00000021840	-	96	34.829	ENSPNAG00000005461	-	95	34.829	Pygocentrus_nattereri
ENSACLG00000021840	-	97	32.762	ENSPNAG00000021284	-	97	32.762	Pygocentrus_nattereri
ENSACLG00000021840	-	64	32.764	ENSPNAG00000008260	-	58	32.764	Pygocentrus_nattereri
ENSACLG00000021840	-	68	51.335	ENSSFOG00015018996	-	88	51.335	Scleropages_formosus
ENSACLG00000021840	-	97	68.736	ENSSDUG00000013172	-	96	68.736	Seriola_dumerili
ENSACLG00000021840	-	100	69.957	ENSSLDG00000012064	-	100	69.957	Seriola_lalandi_dorsalis
ENSACLG00000021840	-	100	68.240	ENSSPAG00000003097	-	100	68.240	Stegastes_partitus
ENSACLG00000021840	-	71	39.403	ENSXMAG00000025862	-	55	39.403	Xiphophorus_maculatus
ENSACLG00000021840	-	98	33.621	ENSXMAG00000022751	-	95	33.621	Xiphophorus_maculatus