EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000022079 (Gene tree)
Gene ID: 113010196
Gene Symbol: smg7
Alias: fa99h10|wu:fa99h10
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 21585 bases
Position: chr18:1556246-1577830
Accession: 113010196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000032583	EST1	PF10374.9	5.7e-27	1	1
ENSACLP00000032721	EST1	PF10374.9	1.9e-25	1	1
ENSACLP00000032617	EST1	PF10374.9	2.1e-25	1	1
ENSACLP00000032583	EST1_DNA_bind	PF10373.9	4.7e-48	1	1
ENSACLP00000032617	EST1_DNA_bind	PF10373.9	5.1e-48	1	1
ENSACLP00000032721	EST1_DNA_bind	PF10373.9	7.9e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000033386	-	7760	XM_026149147	ENSACLP00000032617	1187 (aa)	XP_026004932	UPI000E3FF5DB
ENSACLT00000033350	-	7704	XM_026149150	ENSACLP00000032583	1137 (aa)	XP_026004935	UPI000E41441A
ENSACLT00000033491	-	3357	-	ENSACLP00000032721	1118 (aa)	-	-

Gene Model

Click here to download ENSACLG00000022079's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000022079's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000022079	smg7	99	66.324	ENSG00000116698	SMG7	86	94.340	Homo_sapiens
ENSACLG00000022079	smg7	89	94.048	ENSAPOG00000009611	smg7	96	94.048	Acanthochromis_polyacanthus
ENSACLG00000022079	smg7	99	65.517	ENSAMEG00000002357	SMG7	100	65.110	Ailuropoda_melanoleuca
ENSACLG00000022079	smg7	97	85.198	ENSACIG00000015152	smg7	100	88.129	Amphilophus_citrinellus
ENSACLG00000022079	smg7	100	90.711	ENSAOCG00000013538	smg7	100	92.803	Amphiprion_ocellaris
ENSACLG00000022079	smg7	100	90.385	ENSAPEG00000007851	smg7	100	92.391	Amphiprion_percula
ENSACLG00000022079	smg7	100	89.140	ENSATEG00000006931	smg7	100	89.140	Anabas_testudineus
ENSACLG00000022079	smg7	93	71.000	ENSAPLG00000015811	SMG7	99	65.120	Anas_platyrhynchos
ENSACLG00000022079	smg7	99	65.338	ENSACAG00000014989	SMG7	99	65.196	Anolis_carolinensis
ENSACLG00000022079	smg7	99	66.038	ENSANAG00000028114	SMG7	85	94.231	Aotus_nancymaae
ENSACLG00000022079	smg7	100	76.795	ENSAMXG00000020809	smg7	100	76.783	Astyanax_mexicanus
ENSACLG00000022079	smg7	99	66.667	ENSBTAG00000008003	SMG7	99	65.506	Bos_taurus
ENSACLG00000022079	smg7	99	65.952	ENSCJAG00000005135	SMG7	89	91.358	Callithrix_jacchus
ENSACLG00000022079	smg7	99	64.410	ENSCAFG00000013276	SMG7	97	64.303	Canis_familiaris
ENSACLG00000022079	smg7	99	65.582	ENSCAFG00020015475	SMG7	89	90.244	Canis_lupus_dingo
ENSACLG00000022079	smg7	100	64.963	ENSCHIG00000018192	SMG7	99	64.029	Capra_hircus
ENSACLG00000022079	smg7	99	66.237	ENSTSYG00000002667	SMG7	81	94.268	Carlito_syrichta
ENSACLG00000022079	smg7	99	64.575	ENSCPOG00000008906	SMG7	99	63.877	Cavia_porcellus
ENSACLG00000022079	smg7	99	66.209	ENSCCAG00000028596	SMG7	85	94.231	Cebus_capucinus
ENSACLG00000022079	smg7	99	66.410	ENSCATG00000011063	SMG7	85	94.231	Cercocebus_atys
ENSACLG00000022079	smg7	99	66.151	ENSCLAG00000010751	SMG7	99	65.081	Chinchilla_lanigera
ENSACLG00000022079	smg7	99	64.856	ENSCSAG00000012654	SMG7	97	64.000	Chlorocebus_sabaeus
ENSACLG00000022079	smg7	87	63.043	ENSCHOG00000010522	SMG7	88	63.043	Choloepus_hoffmanni
ENSACLG00000022079	smg7	99	66.667	ENSCPBG00000015724	SMG7	99	65.772	Chrysemys_picta_bellii
ENSACLG00000022079	smg7	99	66.294	ENSCANG00000015680	SMG7	85	94.231	Colobus_angolensis_palliatus
ENSACLG00000022079	smg7	99	65.210	ENSCGRG00001013705	Smg7	99	64.516	Cricetulus_griseus_chok1gshd
ENSACLG00000022079	smg7	99	65.060	ENSCGRG00000018401	Smg7	100	64.365	Cricetulus_griseus_crigri
ENSACLG00000022079	smg7	99	81.460	ENSCVAG00000011842	smg7	100	83.251	Cyprinodon_variegatus
ENSACLG00000022079	smg7	100	76.373	ENSDARG00000060767	smg7	100	76.694	Danio_rerio
ENSACLG00000022079	smg7	99	64.599	ENSDORG00000007331	Smg7	99	63.584	Dipodomys_ordii
ENSACLG00000022079	smg7	97	63.737	ENSETEG00000002654	SMG7	99	62.869	Echinops_telfairi
ENSACLG00000022079	smg7	99	65.235	ENSEASG00005006524	SMG7	99	65.153	Equus_asinus_asinus
ENSACLG00000022079	smg7	94	88.358	ENSECAG00000004313	SMG7	97	88.131	Equus_caballus
ENSACLG00000022079	smg7	97	63.853	ENSEEUG00000002024	SMG7	94	63.153	Erinaceus_europaeus
ENSACLG00000022079	smg7	100	78.430	ENSELUG00000010293	smg7	100	78.648	Esox_lucius
ENSACLG00000022079	smg7	94	71.154	ENSFCAG00000010900	SMG7	99	71.154	Felis_catus
ENSACLG00000022079	smg7	99	63.826	ENSFALG00000003047	SMG7	100	64.304	Ficedula_albicollis
ENSACLG00000022079	smg7	99	64.764	ENSFDAG00000012121	SMG7	99	63.576	Fukomys_damarensis
ENSACLG00000022079	smg7	100	82.419	ENSFHEG00000011073	smg7	100	82.220	Fundulus_heteroclitus
ENSACLG00000022079	smg7	89	81.391	ENSGMOG00000004916	smg7	91	81.391	Gadus_morhua
ENSACLG00000022079	smg7	93	72.000	ENSGALG00000004667	SMG7	99	65.753	Gallus_gallus
ENSACLG00000022079	smg7	100	81.739	ENSGAFG00000019000	smg7	100	81.661	Gambusia_affinis
ENSACLG00000022079	smg7	97	81.753	ENSGACG00000001634	smg7	99	81.843	Gasterosteus_aculeatus
ENSACLG00000022079	smg7	99	66.581	ENSGGOG00000002342	SMG7	82	91.875	Gorilla_gorilla
ENSACLG00000022079	smg7	100	99.663	ENSHBUG00000003726	smg7	100	99.663	Haplochromis_burtoni
ENSACLG00000022079	smg7	99	66.410	ENSHGLG00000009353	SMG7	99	65.336	Heterocephalus_glaber_female
ENSACLG00000022079	smg7	99	59.323	ENSHGLG00100004878	-	99	59.042	Heterocephalus_glaber_male
ENSACLG00000022079	smg7	99	66.324	ENSHGLG00100009637	-	99	65.251	Heterocephalus_glaber_male
ENSACLG00000022079	smg7	100	76.214	ENSIPUG00000016997	smg7	100	76.801	Ictalurus_punctatus
ENSACLG00000022079	smg7	99	65.095	ENSSTOG00000000401	SMG7	99	64.157	Ictidomys_tridecemlineatus
ENSACLG00000022079	smg7	99	64.983	ENSJJAG00000012351	Smg7	99	64.046	Jaculus_jaculus
ENSACLG00000022079	smg7	97	80.071	ENSKMAG00000004900	smg7	98	85.644	Kryptolebias_marmoratus
ENSACLG00000022079	smg7	99	86.725	ENSLBEG00000002983	smg7	99	86.638	Labrus_bergylta
ENSACLG00000022079	smg7	52	78.727	ENSLBEG00000005220	-	75	78.727	Labrus_bergylta
ENSACLG00000022079	smg7	100	68.263	ENSLACG00000000972	SMG7	100	68.532	Latimeria_chalumnae
ENSACLG00000022079	smg7	99	71.029	ENSLOCG00000002010	smg7	99	71.031	Lepisosteus_oculatus
ENSACLG00000022079	smg7	99	64.735	ENSLAFG00000008186	SMG7	99	63.711	Loxodonta_africana
ENSACLG00000022079	smg7	99	65.264	ENSMFAG00000031653	SMG7	85	94.231	Macaca_fascicularis
ENSACLG00000022079	smg7	99	65.486	ENSMMUG00000018458	SMG7	99	64.542	Macaca_mulatta
ENSACLG00000022079	smg7	99	66.410	ENSMNEG00000034798	SMG7	85	94.231	Macaca_nemestrina
ENSACLG00000022079	smg7	99	66.410	ENSMLEG00000037170	SMG7	100	64.538	Mandrillus_leucophaeus
ENSACLG00000022079	smg7	88	86.535	ENSMAMG00000018733	smg7	86	87.288	Mastacembelus_armatus
ENSACLG00000022079	smg7	100	99.832	ENSMZEG00005015247	smg7	100	99.832	Maylandia_zebra
ENSACLG00000022079	smg7	99	64.680	ENSMGAG00000001561	SMG7	99	65.259	Meleagris_gallopavo
ENSACLG00000022079	smg7	99	65.039	ENSMAUG00000019484	Smg7	99	64.346	Mesocricetus_auratus
ENSACLG00000022079	smg7	99	66.381	ENSMICG00000007145	SMG7	81	94.231	Microcebus_murinus
ENSACLG00000022079	smg7	99	65.381	ENSMOCG00000020748	Smg7	99	64.231	Microtus_ochrogaster
ENSACLG00000022079	smg7	99	81.636	ENSMMOG00000001524	smg7	98	86.500	Mola_mola
ENSACLG00000022079	smg7	92	65.672	ENSMODG00000007139	SMG7	99	64.103	Monodelphis_domestica
ENSACLG00000022079	smg7	100	87.678	ENSMALG00000000061	smg7	94	88.768	Monopterus_albus
ENSACLG00000022079	smg7	99	65.895	MGP_CAROLIEiJ_G0014704	Smg7	99	64.766	Mus_caroli
ENSACLG00000022079	smg7	99	65.210	ENSMUSG00000042772	Smg7	99	64.516	Mus_musculus
ENSACLG00000022079	smg7	99	65.523	MGP_PahariEiJ_G0027940	Smg7	99	64.826	Mus_pahari
ENSACLG00000022079	smg7	99	65.296	MGP_SPRETEiJ_G0015511	Smg7	99	64.601	Mus_spretus
ENSACLG00000022079	smg7	98	64.298	ENSMPUG00000011732	SMG7	97	64.381	Mustela_putorius_furo
ENSACLG00000022079	smg7	99	64.404	ENSMLUG00000015417	SMG7	99	63.823	Myotis_lucifugus
ENSACLG00000022079	smg7	100	65.641	ENSNGAG00000009836	Smg7	100	65.556	Nannospalax_galili
ENSACLG00000022079	smg7	98	90.917	ENSNBRG00000024343	smg7	99	90.739	Neolamprologus_brichardi
ENSACLG00000022079	smg7	99	66.495	ENSNLEG00000018018	SMG7	100	64.622	Nomascus_leucogenys
ENSACLG00000022079	smg7	71	65.341	ENSMEUG00000004681	SMG7	73	65.341	Notamacropus_eugenii
ENSACLG00000022079	smg7	96	59.620	ENSOPRG00000013942	SMG7	96	59.215	Ochotona_princeps
ENSACLG00000022079	smg7	99	65.979	ENSODEG00000010390	SMG7	99	64.911	Octodon_degus
ENSACLG00000022079	smg7	100	98.773	ENSONIG00000000277	smg7	100	98.773	Oreochromis_niloticus
ENSACLG00000022079	smg7	99	63.636	ENSOANG00000000994	SMG7	100	63.720	Ornithorhynchus_anatinus
ENSACLG00000022079	smg7	99	61.940	ENSOCUG00000005887	SMG7	92	62.046	Oryctolagus_cuniculus
ENSACLG00000022079	smg7	100	79.950	ENSORLG00000007314	smg7	100	80.537	Oryzias_latipes
ENSACLG00000022079	smg7	100	80.369	ENSORLG00020015779	smg7	100	80.956	Oryzias_latipes_hni
ENSACLG00000022079	smg7	100	80.537	ENSORLG00015012289	smg7	100	80.705	Oryzias_latipes_hsok
ENSACLG00000022079	smg7	100	80.369	ENSOMEG00000002328	smg7	100	81.208	Oryzias_melastigma
ENSACLG00000022079	smg7	97	63.590	ENSOGAG00000003107	SMG7	93	63.265	Otolemur_garnettii
ENSACLG00000022079	smg7	99	65.183	ENSOARG00000001352	SMG7	100	64.193	Ovis_aries
ENSACLG00000022079	smg7	99	66.495	ENSPPAG00000031619	SMG7	89	90.798	Pan_paniscus
ENSACLG00000022079	smg7	99	66.036	ENSPPRG00000011222	SMG7	99	66.438	Panthera_pardus
ENSACLG00000022079	smg7	97	65.051	ENSPTIG00000007242	SMG7	100	65.450	Panthera_tigris_altaica
ENSACLG00000022079	smg7	99	66.495	ENSPTRG00000001764	SMG7	85	94.231	Pan_troglodytes
ENSACLG00000022079	smg7	99	66.410	ENSPANG00000004520	SMG7	99	65.421	Papio_anubis
ENSACLG00000022079	smg7	100	71.000	ENSPKIG00000007242	smg7	100	71.333	Paramormyrops_kingsleyae
ENSACLG00000022079	smg7	99	65.769	ENSPSIG00000012201	SMG7	100	64.777	Pelodiscus_sinensis
ENSACLG00000022079	smg7	66	57.000	ENSPMGG00000021833	smg7	97	50.300	Periophthalmus_magnuspinnatus
ENSACLG00000022079	smg7	99	65.195	ENSPEMG00000011315	Smg7	99	64.127	Peromyscus_maniculatus_bairdii
ENSACLG00000022079	smg7	94	71.154	ENSPCIG00000003786	SMG7	89	93.750	Phascolarctos_cinereus
ENSACLG00000022079	smg7	100	82.319	ENSPFOG00000019219	smg7	100	82.681	Poecilia_formosa
ENSACLG00000022079	smg7	100	82.158	ENSPLAG00000001446	smg7	100	82.537	Poecilia_latipinna
ENSACLG00000022079	smg7	97	81.655	ENSPMEG00000005218	smg7	99	82.047	Poecilia_mexicana
ENSACLG00000022079	smg7	88	78.912	ENSPREG00000019039	smg7	92	79.123	Poecilia_reticulata
ENSACLG00000022079	smg7	99	66.495	ENSPPYG00000000427	SMG7	99	65.506	Pongo_abelii
ENSACLG00000022079	smg7	84	72.648	ENSPCAG00000008360	SMG7	86	72.648	Procavia_capensis
ENSACLG00000022079	smg7	99	65.375	ENSPCOG00000011996	SMG7	76	94.231	Propithecus_coquereli
ENSACLG00000022079	smg7	91	60.306	ENSPVAG00000000851	SMG7	89	59.715	Pteropus_vampyrus
ENSACLG00000022079	smg7	100	99.195	ENSPNYG00000007643	smg7	100	99.195	Pundamilia_nyererei
ENSACLG00000022079	smg7	100	75.957	ENSPNAG00000011374	smg7	100	75.950	Pygocentrus_nattereri
ENSACLG00000022079	smg7	99	65.638	ENSRNOG00000027962	Smg7	100	64.148	Rattus_norvegicus
ENSACLG00000022079	smg7	99	66.410	ENSRBIG00000036316	SMG7	100	64.538	Rhinopithecus_bieti
ENSACLG00000022079	smg7	99	66.410	ENSRROG00000035719	SMG7	100	64.538	Rhinopithecus_roxellana
ENSACLG00000022079	smg7	99	64.822	ENSSBOG00000023454	SMG7	86	94.340	Saimiri_boliviensis_boliviensis
ENSACLG00000022079	smg7	100	65.497	ENSSHAG00000013147	SMG7	99	64.796	Sarcophilus_harrisii
ENSACLG00000022079	smg7	100	74.854	ENSSFOG00015017252	smg7	100	74.545	Scleropages_formosus
ENSACLG00000022079	smg7	100	85.185	ENSSMAG00000006067	smg7	100	86.326	Scophthalmus_maximus
ENSACLG00000022079	smg7	96	95.724	ENSSDUG00000017543	smg7	100	90.381	Seriola_dumerili
ENSACLG00000022079	smg7	99	65.523	ENSSPUG00000002064	SMG7	99	64.461	Sphenodon_punctatus
ENSACLG00000022079	smg7	99	87.074	ENSSPAG00000008733	smg7	99	87.707	Stegastes_partitus
ENSACLG00000022079	smg7	99	64.944	ENSSSCG00000015558	SMG7	99	64.334	Sus_scrofa
ENSACLG00000022079	smg7	99	64.974	ENSTGUG00000003928	SMG7	100	65.550	Taeniopygia_guttata
ENSACLG00000022079	smg7	100	74.547	ENSTNIG00000002802	smg7	100	74.465	Tetraodon_nigroviridis
ENSACLG00000022079	smg7	78	68.000	ENSTBEG00000003220	SMG7	75	68.000	Tupaia_belangeri
ENSACLG00000022079	smg7	96	64.017	ENSTTRG00000014778	SMG7	94	63.506	Tursiops_truncatus
ENSACLG00000022079	smg7	96	63.693	ENSUAMG00000017473	SMG7	100	64.114	Ursus_americanus
ENSACLG00000022079	smg7	97	63.706	ENSUMAG00000016389	SMG7	100	64.114	Ursus_maritimus
ENSACLG00000022079	smg7	94	70.192	ENSVVUG00000008976	SMG7	99	70.192	Vulpes_vulpes
ENSACLG00000022079	smg7	99	60.627	ENSXETG00000012528	smg7	99	60.611	Xenopus_tropicalis
ENSACLG00000022079	smg7	100	81.707	ENSXMAG00000007123	smg7	100	82.000	Xiphophorus_maculatus