EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000022183 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 1965 bases
Position: chr1:12655195-12657159
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000032715	zf-CCHC	PF00098.23	5.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000033485	-	1965	-	ENSACLP00000032715	654 (aa)	-	-

Gene Model

Click here to download ENSACLG00000022183's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000022183's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000022183	-	81	83.697	ENSACLG00000015735	-	73	83.697
ENSACLG00000022183	-	78	88.337	ENSACLG00000006225	-	90	88.337
ENSACLG00000022183	-	98	81.000	ENSACLG00000010042	-	57	81.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000022183	-	72	46.032	ENSAPOG00000013711	-	58	46.032	Acanthochromis_polyacanthus
ENSACLG00000022183	-	72	46.032	ENSAPOG00000013817	-	63	46.032	Acanthochromis_polyacanthus
ENSACLG00000022183	-	71	44.444	ENSGAGG00000002373	-	52	44.444	Gopherus_agassizii
ENSACLG00000022183	-	65	44.444	ENSGAGG00000003017	-	57	44.444	Gopherus_agassizii
ENSACLG00000022183	-	75	46.774	ENSKMAG00000018163	-	63	46.774	Kryptolebias_marmoratus
ENSACLG00000022183	-	77	43.571	ENSSLDG00000004385	-	54	43.972	Seriola_lalandi_dorsalis