EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000022198 (Gene tree)
Gene ID: 113006344
Gene Symbol: -
Alias: -
Full Name: interferon-induced protein 44-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 6164 bases
Position: chr15:32469853-32476016
Accession: 113006344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000032747	MMR_HSR1	PF01926.23	2.3e-05	1	1
ENSACLP00000032729	MMR_HSR1	PF01926.23	2.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000033517	-	2164	-	ENSACLP00000032747	367 (aa)	XP_025998040	UPI00032971B5
ENSACLT00000033499	-	2227	-	ENSACLP00000032729	388 (aa)	XP_025998038	UPI00032A1AF8

Gene Model

Click here to download ENSACLG00000022198's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000022198's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000022198	-	77	42.254	ENSACLG00000022167	-	64	42.254
ENSACLG00000022198	-	72	32.959	ENSACLG00000010292	-	94	32.959
ENSACLG00000022198	-	69	32.143	ENSACLG00000016487	-	84	32.143
ENSACLG00000022198	-	88	39.589	ENSACLG00000022141	-	73	39.589
ENSACLG00000022198	-	94	32.514	ENSACLG00000009420	zgc:153654	79	32.514
ENSACLG00000022198	-	78	43.206	ENSACLG00000021969	-	64	42.857
ENSACLG00000022198	-	77	41.197	ENSACLG00000013499	-	64	41.197
ENSACLG00000022198	-	66	32.114	ENSACLG00000018321	-	85	32.520

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000022198	-	76	70.504	ENSELUG00000013202	-	85	70.504	Esox_lucius
ENSACLG00000022198	-	97	92.737	ENSHBUG00000009125	-	98	92.737	Haplochromis_burtoni
ENSACLG00000022198	-	100	98.196	ENSMZEG00005016318	-	100	98.196	Maylandia_zebra
ENSACLG00000022198	-	76	98.571	ENSNBRG00000021847	-	100	98.571	Neolamprologus_brichardi
ENSACLG00000022198	-	98	81.867	ENSPNYG00000016531	-	97	96.587	Pundamilia_nyererei
ENSACLG00000022198	-	76	67.376	ENSPNAG00000009985	-	75	67.376	Pygocentrus_nattereri
ENSACLG00000022198	-	89	72.036	ENSSLDG00000007218	-	92	72.036	Seriola_lalandi_dorsalis
ENSACLG00000022198	-	68	38.247	ENSTRUG00000003706	-	90	38.247	Takifugu_rubripes
ENSACLG00000022198	-	69	47.656	ENSTRUG00000002247	-	92	47.656	Takifugu_rubripes