EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000022388 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 3282 bases
Position: chr4:4484112-4487393
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000033020	RVT_1	PF00078.27	1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000033800	-	3282	-	ENSACLP00000033020	1093 (aa)	-	-

Gene Model

Click here to download ENSACLG00000022388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000022388's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000022388	-	68	98.930	ENSACLG00000017721	-	98	98.930
ENSACLG00000022388	-	100	99.451	ENSACLG00000019948	-	100	99.451
ENSACLG00000022388	-	85	98.060	ENSACLG00000009148	-	100	98.060
ENSACLG00000022388	-	92	97.308	ENSACLG00000013967	-	100	97.308
ENSACLG00000022388	-	99	98.900	ENSACLG00000019821	-	99	98.900
ENSACLG00000022388	-	77	99.524	ENSACLG00000022824	-	100	99.524
ENSACLG00000022388	-	70	98.817	ENSACLG00000027475	-	100	98.817
ENSACLG00000022388	-	99	97.419	ENSACLG00000007511	-	100	97.419
ENSACLG00000022388	-	77	98.091	ENSACLG00000021406	-	97	98.091
ENSACLG00000022388	-	80	98.393	ENSACLG00000013139	-	100	98.393
ENSACLG00000022388	-	76	97.714	ENSACLG00000021830	-	98	97.714
ENSACLG00000022388	-	93	99.215	ENSACLG00000021834	-	100	99.215
ENSACLG00000022388	-	100	99.451	ENSACLG00000011507	-	100	99.451
ENSACLG00000022388	-	100	98.811	ENSACLG00000002396	-	100	98.811
ENSACLG00000022388	-	91	98.794	ENSACLG00000002775	-	100	98.794
ENSACLG00000022388	-	100	99.726	ENSACLG00000013632	-	100	99.726
ENSACLG00000022388	-	100	99.543	ENSACLG00000014121	-	100	99.543
ENSACLG00000022388	-	73	99.377	ENSACLG00000023336	-	99	99.377
ENSACLG00000022388	-	100	99.543	ENSACLG00000003757	-	100	99.543
ENSACLG00000022388	-	70	99.217	ENSACLG00000005419	-	99	99.217
ENSACLG00000022388	-	100	99.268	ENSACLG00000009407	-	100	99.268
ENSACLG00000022388	-	69	98.681	ENSACLG00000004963	-	99	98.681
ENSACLG00000022388	-	93	99.706	ENSACLG00000016079	-	100	99.706
ENSACLG00000022388	-	86	99.681	ENSACLG00000013574	-	99	99.681
ENSACLG00000022388	-	93	98.921	ENSACLG00000013988	-	100	98.921
ENSACLG00000022388	-	85	99.353	ENSACLG00000018006	-	100	99.353
ENSACLG00000022388	-	93	99.607	ENSACLG00000017606	-	100	99.607
ENSACLG00000022388	-	73	99.751	ENSACLG00000014939	-	99	99.751
ENSACLG00000022388	-	100	99.268	ENSACLG00000007447	-	100	99.268
ENSACLG00000022388	-	82	99.552	ENSACLG00000016654	-	99	99.552
ENSACLG00000022388	-	98	99.349	ENSACLG00000017392	-	100	99.349
ENSACLG00000022388	-	85	99.030	ENSACLG00000025178	-	100	99.030
ENSACLG00000022388	-	69	98.813	ENSACLG00000006057	-	99	98.813
ENSACLG00000022388	-	85	99.138	ENSACLG00000003607	-	93	99.138

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000022388	-	51	36.934	ENSLACG00000004832	-	100	36.934	Latimeria_chalumnae
ENSACLG00000022388	-	59	39.637	ENSLACG00000004233	-	99	39.637	Latimeria_chalumnae
ENSACLG00000022388	-	73	37.884	ENSLACG00000013644	-	99	37.884	Latimeria_chalumnae
ENSACLG00000022388	-	50	34.446	ENSLACG00000016962	-	100	40.244	Latimeria_chalumnae
ENSACLG00000022388	-	55	34.984	ENSLACG00000006107	-	99	34.345	Latimeria_chalumnae
ENSACLG00000022388	-	59	45.385	ENSLACG00000012911	-	98	45.385	Latimeria_chalumnae
ENSACLG00000022388	-	87	98.846	ENSMZEG00005028496	-	96	98.846	Maylandia_zebra
ENSACLG00000022388	-	80	80.505	ENSORLG00000028072	-	100	80.505	Oryzias_latipes
ENSACLG00000022388	-	98	76.509	ENSORLG00000025841	-	99	76.509	Oryzias_latipes
ENSACLG00000022388	-	98	75.023	ENSORLG00000028428	-	94	75.023	Oryzias_latipes
ENSACLG00000022388	-	98	76.623	ENSORLG00000028038	-	99	76.623	Oryzias_latipes
ENSACLG00000022388	-	98	76.531	ENSORLG00000026631	-	99	76.531	Oryzias_latipes
ENSACLG00000022388	-	72	80.563	ENSORLG00000023528	-	99	80.563	Oryzias_latipes
ENSACLG00000022388	-	80	80.849	ENSORLG00000027125	-	100	80.849	Oryzias_latipes
ENSACLG00000022388	-	75	81.220	ENSORLG00000022216	-	100	81.220	Oryzias_latipes
ENSACLG00000022388	-	76	81.643	ENSORLG00000025660	-	99	81.643	Oryzias_latipes
ENSACLG00000022388	-	85	79.310	ENSORLG00000023099	-	100	79.310	Oryzias_latipes
ENSACLG00000022388	-	95	75.912	ENSORLG00020004983	-	99	75.912	Oryzias_latipes_hni
ENSACLG00000022388	-	80	80.849	ENSORLG00020020895	-	100	80.849	Oryzias_latipes_hni
ENSACLG00000022388	-	76	81.643	ENSORLG00020006197	-	99	81.643	Oryzias_latipes_hni
ENSACLG00000022388	-	98	76.994	ENSORLG00020010783	-	99	76.994	Oryzias_latipes_hni
ENSACLG00000022388	-	80	80.619	ENSORLG00020020703	-	100	80.619	Oryzias_latipes_hni
ENSACLG00000022388	-	97	77.861	ENSPREG00000022240	-	98	77.861	Poecilia_reticulata
ENSACLG00000022388	-	76	82.104	ENSXMAG00000021428	-	99	82.104	Xiphophorus_maculatus