EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000022555 (Gene tree)
Gene ID: 113025351
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b%2C subunit 3
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 22436 bases
Position: chr7:10521990-10544425
Accession: ZDB-GENE-040426-2901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000033349	CPSF_A	PF03178.15	4.7e-92	1	1
ENSACLP00000033406	CPSF_A	PF03178.15	9.7e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000034140	-	6338	-	ENSACLP00000033349	1193 (aa)	-	-
ENSACLT00000034200	-	3264	-	ENSACLP00000033406	1087 (aa)	-	-

Gene Model

Click here to download ENSACLG00000022555's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000022555's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000022555	sf3b3	98	93.168	ENSG00000189091	SF3B3	100	98.246	Homo_sapiens
ENSACLG00000022555	sf3b3	99	98.216	ENSAPOG00000006172	sf3b3	98	98.216	Acanthochromis_polyacanthus
ENSACLG00000022555	sf3b3	98	93.015	ENSAMEG00000002187	SF3B3	96	93.015	Ailuropoda_melanoleuca
ENSACLG00000022555	sf3b3	100	99.356	ENSACIG00000016487	sf3b3	100	99.356	Amphilophus_citrinellus
ENSACLG00000022555	sf3b3	98	98.634	ENSAOCG00000007158	sf3b3	96	98.634	Amphiprion_ocellaris
ENSACLG00000022555	sf3b3	98	98.634	ENSAPEG00000022786	sf3b3	96	98.634	Amphiprion_percula
ENSACLG00000022555	sf3b3	98	98.548	ENSATEG00000013708	sf3b3	96	98.548	Anabas_testudineus
ENSACLG00000022555	sf3b3	82	94.250	ENSAPLG00000004996	SF3B3	99	92.988	Anas_platyrhynchos
ENSACLG00000022555	sf3b3	98	93.339	ENSACAG00000001817	SF3B3	96	93.339	Anolis_carolinensis
ENSACLG00000022555	sf3b3	98	93.168	ENSANAG00000028001	SF3B3	96	93.168	Aotus_nancymaae
ENSACLG00000022555	sf3b3	98	97.523	ENSAMXG00000003410	sf3b3	96	97.523	Astyanax_mexicanus
ENSACLG00000022555	sf3b3	100	91.659	ENSBTAG00000010627	SF3B3	96	93.168	Bos_taurus
ENSACLG00000022555	sf3b3	98	59.444	WBGene00019323	teg-4	96	59.444	Caenorhabditis_elegans
ENSACLG00000022555	sf3b3	100	91.260	ENSCJAG00000014773	SF3B3	100	91.260	Callithrix_jacchus
ENSACLG00000022555	sf3b3	98	93.254	ENSCAFG00000020151	SF3B3	96	93.254	Canis_familiaris
ENSACLG00000022555	sf3b3	98	93.254	ENSCAFG00020020912	SF3B3	96	93.254	Canis_lupus_dingo
ENSACLG00000022555	sf3b3	98	93.254	ENSCHIG00000019822	SF3B3	96	93.254	Capra_hircus
ENSACLG00000022555	sf3b3	98	93.168	ENSTSYG00000007910	SF3B3	96	93.168	Carlito_syrichta
ENSACLG00000022555	sf3b3	82	78.261	ENSCAPG00000001484	SF3B3	87	78.261	Cavia_aperea
ENSACLG00000022555	sf3b3	98	91.887	ENSCPOG00000000586	SF3B3	96	91.887	Cavia_porcellus
ENSACLG00000022555	sf3b3	98	93.168	ENSCCAG00000017736	SF3B3	96	93.168	Cebus_capucinus
ENSACLG00000022555	sf3b3	98	93.168	ENSCATG00000036562	SF3B3	96	93.168	Cercocebus_atys
ENSACLG00000022555	sf3b3	98	93.168	ENSCLAG00000003921	SF3B3	96	93.168	Chinchilla_lanigera
ENSACLG00000022555	sf3b3	98	93.168	ENSCSAG00000004371	SF3B3	96	93.168	Chlorocebus_sabaeus
ENSACLG00000022555	sf3b3	89	88.839	ENSCHOG00000001878	SF3B3	86	89.720	Choloepus_hoffmanni
ENSACLG00000022555	sf3b3	98	92.827	ENSCPBG00000015853	SF3B3	96	92.827	Chrysemys_picta_bellii
ENSACLG00000022555	sf3b3	98	79.608	ENSCING00000001342	-	96	79.608	Ciona_intestinalis
ENSACLG00000022555	sf3b3	99	78.732	ENSCSAVG00000011454	-	100	75.283	Ciona_savignyi
ENSACLG00000022555	sf3b3	100	88.798	ENSCANG00000042920	SF3B3	96	89.923	Colobus_angolensis_palliatus
ENSACLG00000022555	sf3b3	98	93.083	ENSCGRG00001015908	Sf3b3	96	93.083	Cricetulus_griseus_chok1gshd
ENSACLG00000022555	sf3b3	98	93.083	ENSCGRG00000010180	Sf3b3	96	93.083	Cricetulus_griseus_crigri
ENSACLG00000022555	sf3b3	84	96.607	ENSCSEG00000014192	sf3b3	99	96.607	Cynoglossus_semilaevis
ENSACLG00000022555	sf3b3	98	97.694	ENSCVAG00000010459	sf3b3	96	97.694	Cyprinodon_variegatus
ENSACLG00000022555	sf3b3	98	97.182	ENSDARG00000103553	sf3b3	96	97.182	Danio_rerio
ENSACLG00000022555	sf3b3	92	89.778	ENSDNOG00000043626	SF3B3	100	89.778	Dasypus_novemcinctus
ENSACLG00000022555	sf3b3	98	93.168	ENSDORG00000014176	Sf3b3	96	93.168	Dipodomys_ordii
ENSACLG00000022555	sf3b3	98	75.507	FBgn0035162	Sf3b3	96	75.507	Drosophila_melanogaster
ENSACLG00000022555	sf3b3	81	95.781	ENSETEG00000002729	SF3B3	80	95.781	Echinops_telfairi
ENSACLG00000022555	sf3b3	98	86.336	ENSEBUG00000006117	sf3b3	96	86.336	Eptatretus_burgeri
ENSACLG00000022555	sf3b3	98	93.254	ENSEASG00005013376	SF3B3	96	93.254	Equus_asinus_asinus
ENSACLG00000022555	sf3b3	98	93.254	ENSECAG00000014053	SF3B3	96	93.254	Equus_caballus
ENSACLG00000022555	sf3b3	92	92.812	ENSEEUG00000015611	SF3B3	89	92.632	Erinaceus_europaeus
ENSACLG00000022555	sf3b3	98	95.830	ENSELUG00000015417	sf3b3	99	95.830	Esox_lucius
ENSACLG00000022555	sf3b3	98	93.254	ENSFCAG00000009487	SF3B3	96	93.254	Felis_catus
ENSACLG00000022555	sf3b3	98	92.912	ENSFALG00000007372	SF3B3	96	92.912	Ficedula_albicollis
ENSACLG00000022555	sf3b3	98	93.168	ENSFDAG00000002608	SF3B3	96	93.168	Fukomys_damarensis
ENSACLG00000022555	sf3b3	98	98.292	ENSFHEG00000017824	sf3b3	96	98.292	Fundulus_heteroclitus
ENSACLG00000022555	sf3b3	98	93.345	ENSGMOG00000008139	sf3b3	96	93.345	Gadus_morhua
ENSACLG00000022555	sf3b3	98	93.083	ENSGALG00000002531	SF3B3	96	93.083	Gallus_gallus
ENSACLG00000022555	sf3b3	98	97.865	ENSGAFG00000015206	sf3b3	98	98.171	Gambusia_affinis
ENSACLG00000022555	sf3b3	98	97.696	ENSGACG00000002646	sf3b3	96	97.696	Gasterosteus_aculeatus
ENSACLG00000022555	sf3b3	98	92.924	ENSGAGG00000006746	SF3B3	97	92.924	Gopherus_agassizii
ENSACLG00000022555	sf3b3	98	93.168	ENSGGOG00000003246	SF3B3	96	93.168	Gorilla_gorilla
ENSACLG00000022555	sf3b3	100	95.768	ENSHBUG00000005960	sf3b3	100	95.768	Haplochromis_burtoni
ENSACLG00000022555	sf3b3	98	93.168	ENSHGLG00000010135	SF3B3	96	93.168	Heterocephalus_glaber_female
ENSACLG00000022555	sf3b3	98	90.986	ENSHGLG00100011148	SF3B3	96	90.986	Heterocephalus_glaber_male
ENSACLG00000022555	sf3b3	100	95.776	ENSHCOG00000011981	sf3b3	100	95.776	Hippocampus_comes
ENSACLG00000022555	sf3b3	98	97.438	ENSIPUG00000020435	sf3b3	96	97.438	Ictalurus_punctatus
ENSACLG00000022555	sf3b3	98	93.168	ENSSTOG00000007065	SF3B3	96	93.168	Ictidomys_tridecemlineatus
ENSACLG00000022555	sf3b3	98	93.168	ENSJJAG00000003948	Sf3b3	96	93.168	Jaculus_jaculus
ENSACLG00000022555	sf3b3	98	98.039	ENSKMAG00000004066	sf3b3	99	98.039	Kryptolebias_marmoratus
ENSACLG00000022555	sf3b3	98	97.865	ENSLBEG00000018302	sf3b3	99	97.187	Labrus_bergylta
ENSACLG00000022555	sf3b3	100	87.234	ENSLACG00000012501	SF3B3	96	89.724	Latimeria_chalumnae
ENSACLG00000022555	sf3b3	98	96.587	ENSLOCG00000007566	sf3b3	96	96.587	Lepisosteus_oculatus
ENSACLG00000022555	sf3b3	98	93.254	ENSLAFG00000012219	SF3B3	96	93.254	Loxodonta_africana
ENSACLG00000022555	sf3b3	98	93.168	ENSMFAG00000045487	SF3B3	96	93.168	Macaca_fascicularis
ENSACLG00000022555	sf3b3	98	93.168	ENSMMUG00000017812	SF3B3	96	93.168	Macaca_mulatta
ENSACLG00000022555	sf3b3	98	93.168	ENSMNEG00000033385	SF3B3	96	93.168	Macaca_nemestrina
ENSACLG00000022555	sf3b3	98	89.496	ENSMLEG00000043891	SF3B3	96	89.496	Mandrillus_leucophaeus
ENSACLG00000022555	sf3b3	98	98.634	ENSMAMG00000016837	sf3b3	96	98.634	Mastacembelus_armatus
ENSACLG00000022555	sf3b3	96	100.000	ENSMZEG00005026015	sf3b3	99	100.000	Maylandia_zebra
ENSACLG00000022555	sf3b3	100	100.000	ENSMZEG00005010836	sf3b3	100	100.000	Maylandia_zebra
ENSACLG00000022555	sf3b3	98	93.083	ENSMGAG00000001597	SF3B3	96	93.083	Meleagris_gallopavo
ENSACLG00000022555	sf3b3	83	76.030	ENSMAUG00000013618	Sf3b3	95	76.779	Mesocricetus_auratus
ENSACLG00000022555	sf3b3	98	92.157	ENSMICG00000001363	SF3B3	96	92.157	Microcebus_murinus
ENSACLG00000022555	sf3b3	98	93.083	ENSMOCG00000006108	Sf3b3	96	93.083	Microtus_ochrogaster
ENSACLG00000022555	sf3b3	96	98.282	ENSMMOG00000002598	sf3b3	97	98.282	Mola_mola
ENSACLG00000022555	sf3b3	98	88.993	ENSMODG00000014363	SF3B3	96	88.993	Monodelphis_domestica
ENSACLG00000022555	sf3b3	98	97.950	ENSMALG00000008014	sf3b3	96	97.950	Monopterus_albus
ENSACLG00000022555	sf3b3	98	93.168	MGP_CAROLIEiJ_G0031563	Sf3b3	96	93.168	Mus_caroli
ENSACLG00000022555	sf3b3	98	93.083	ENSMUSG00000033732	Sf3b3	96	93.083	Mus_musculus
ENSACLG00000022555	sf3b3	98	92.997	MGP_SPRETEiJ_G0032681	Sf3b3	96	92.997	Mus_spretus
ENSACLG00000022555	sf3b3	98	93.254	ENSMPUG00000010277	SF3B3	96	93.254	Mustela_putorius_furo
ENSACLG00000022555	sf3b3	98	93.083	ENSMLUG00000014607	SF3B3	96	93.083	Myotis_lucifugus
ENSACLG00000022555	sf3b3	98	93.168	ENSNGAG00000021903	Sf3b3	96	93.168	Nannospalax_galili
ENSACLG00000022555	sf3b3	90	97.222	ENSNBRG00000007197	sf3b3	99	97.222	Neolamprologus_brichardi
ENSACLG00000022555	sf3b3	98	91.638	ENSNLEG00000016127	SF3B3	96	91.638	Nomascus_leucogenys
ENSACLG00000022555	sf3b3	92	88.444	ENSMEUG00000004479	SF3B3	90	88.874	Notamacropus_eugenii
ENSACLG00000022555	sf3b3	100	86.964	ENSOPRG00000009847	SF3B3	96	89.887	Ochotona_princeps
ENSACLG00000022555	sf3b3	98	93.168	ENSODEG00000014154	SF3B3	96	93.168	Octodon_degus
ENSACLG00000022555	sf3b3	98	99.744	ENSONIG00000011198	sf3b3	96	99.744	Oreochromis_niloticus
ENSACLG00000022555	sf3b3	98	93.339	ENSOANG00000001161	-	96	93.339	Ornithorhynchus_anatinus
ENSACLG00000022555	sf3b3	98	91.119	ENSOCUG00000004139	SF3B3	96	91.119	Oryctolagus_cuniculus
ENSACLG00000022555	sf3b3	100	97.332	ENSORLG00000013472	sf3b3	100	97.332	Oryzias_latipes
ENSACLG00000022555	sf3b3	100	97.332	ENSORLG00020017473	sf3b3	100	97.332	Oryzias_latipes_hni
ENSACLG00000022555	sf3b3	100	97.332	ENSORLG00015007710	sf3b3	100	97.332	Oryzias_latipes_hsok
ENSACLG00000022555	sf3b3	98	97.609	ENSOMEG00000014483	sf3b3	96	97.609	Oryzias_melastigma
ENSACLG00000022555	sf3b3	98	92.845	ENSOGAG00000016051	SF3B3	96	92.845	Otolemur_garnettii
ENSACLG00000022555	sf3b3	98	93.015	ENSOARG00000004816	SF3B3	96	93.015	Ovis_aries
ENSACLG00000022555	sf3b3	98	93.168	ENSPPAG00000026807	SF3B3	96	93.168	Pan_paniscus
ENSACLG00000022555	sf3b3	98	93.254	ENSPPRG00000001686	SF3B3	96	93.254	Panthera_pardus
ENSACLG00000022555	sf3b3	97	93.074	ENSPTIG00000020382	SF3B3	100	93.074	Panthera_tigris_altaica
ENSACLG00000022555	sf3b3	98	93.168	ENSPTRG00000008308	SF3B3	96	93.168	Pan_troglodytes
ENSACLG00000022555	sf3b3	98	93.168	ENSPANG00000024075	SF3B3	96	93.168	Papio_anubis
ENSACLG00000022555	sf3b3	100	96.596	ENSPKIG00000002712	sf3b3	100	96.596	Paramormyrops_kingsleyae
ENSACLG00000022555	sf3b3	97	90.064	ENSPSIG00000002232	SF3B3	100	90.064	Pelodiscus_sinensis
ENSACLG00000022555	sf3b3	98	93.083	ENSPEMG00000008603	Sf3b3	96	93.083	Peromyscus_maniculatus_bairdii
ENSACLG00000022555	sf3b3	98	90.436	ENSPMAG00000001793	sf3b3	96	90.436	Petromyzon_marinus
ENSACLG00000022555	sf3b3	98	93.339	ENSPCIG00000014927	SF3B3	96	93.339	Phascolarctos_cinereus
ENSACLG00000022555	sf3b3	98	98.121	ENSPFOG00000015516	sf3b3	96	98.121	Poecilia_formosa
ENSACLG00000022555	sf3b3	98	98.121	ENSPLAG00000014330	sf3b3	97	98.476	Poecilia_latipinna
ENSACLG00000022555	sf3b3	98	98.207	ENSPMEG00000019856	sf3b3	96	98.207	Poecilia_mexicana
ENSACLG00000022555	sf3b3	82	98.420	ENSPREG00000019669	sf3b3	97	98.374	Poecilia_reticulata
ENSACLG00000022555	sf3b3	95	97.297	ENSPPYG00000007539	SF3B3	92	97.297	Pongo_abelii
ENSACLG00000022555	sf3b3	100	70.893	ENSPCAG00000002623	SF3B3	96	71.819	Procavia_capensis
ENSACLG00000022555	sf3b3	83	96.491	ENSPCOG00000026582	SF3B3	96	96.262	Propithecus_coquereli
ENSACLG00000022555	sf3b3	98	93.168	ENSPVAG00000000684	SF3B3	96	93.168	Pteropus_vampyrus
ENSACLG00000022555	sf3b3	100	99.908	ENSPNYG00000003528	sf3b3	100	99.908	Pundamilia_nyererei
ENSACLG00000022555	sf3b3	98	97.096	ENSPNAG00000015419	sf3b3	96	97.096	Pygocentrus_nattereri
ENSACLG00000022555	sf3b3	98	93.083	ENSRNOG00000017724	Sf3b3	96	93.083	Rattus_norvegicus
ENSACLG00000022555	sf3b3	98	93.168	ENSRBIG00000021904	SF3B3	96	93.168	Rhinopithecus_bieti
ENSACLG00000022555	sf3b3	98	93.168	ENSRROG00000045703	SF3B3	96	93.168	Rhinopithecus_roxellana
ENSACLG00000022555	sf3b3	81	41.935	YML049C	-	75	41.935	Saccharomyces_cerevisiae
ENSACLG00000022555	sf3b3	98	93.168	ENSSBOG00000029156	SF3B3	96	93.168	Saimiri_boliviensis_boliviensis
ENSACLG00000022555	sf3b3	98	93.339	ENSSHAG00000000372	SF3B3	96	93.339	Sarcophilus_harrisii
ENSACLG00000022555	sf3b3	100	96.780	ENSSFOG00015012877	sf3b3	100	96.780	Scleropages_formosus
ENSACLG00000022555	sf3b3	98	97.267	ENSSMAG00000014386	sf3b3	96	97.267	Scophthalmus_maximus
ENSACLG00000022555	sf3b3	98	98.804	ENSSDUG00000021201	sf3b3	96	98.804	Seriola_dumerili
ENSACLG00000022555	sf3b3	98	98.804	ENSSLDG00000017532	sf3b3	99	96.341	Seriola_lalandi_dorsalis
ENSACLG00000022555	sf3b3	93	92.531	ENSSARG00000006917	SF3B3	89	92.923	Sorex_araneus
ENSACLG00000022555	sf3b3	98	92.997	ENSSPUG00000006253	SF3B3	96	92.997	Sphenodon_punctatus
ENSACLG00000022555	sf3b3	98	90.436	ENSSPAG00000003125	sf3b3	96	90.436	Stegastes_partitus
ENSACLG00000022555	sf3b3	100	93.284	ENSSSCG00000025323	SF3B3	100	93.284	Sus_scrofa
ENSACLG00000022555	sf3b3	98	93.003	ENSTGUG00000006082	SF3B3	96	93.003	Taeniopygia_guttata
ENSACLG00000022555	sf3b3	55	85.738	ENSTRUG00000015623	sf3b3	96	80.728	Takifugu_rubripes
ENSACLG00000022555	sf3b3	91	97.794	ENSTNIG00000004857	sf3b3	100	97.794	Tetraodon_nigroviridis
ENSACLG00000022555	sf3b3	95	79.049	ENSTBEG00000002946	SF3B3	100	79.049	Tupaia_belangeri
ENSACLG00000022555	sf3b3	98	92.400	ENSTTRG00000005855	SF3B3	96	92.400	Tursiops_truncatus
ENSACLG00000022555	sf3b3	98	93.254	ENSUAMG00000006780	SF3B3	96	93.254	Ursus_americanus
ENSACLG00000022555	sf3b3	98	93.254	ENSUMAG00000017757	SF3B3	96	93.254	Ursus_maritimus
ENSACLG00000022555	sf3b3	98	77.541	ENSVPAG00000003202	SF3B3	96	77.541	Vicugna_pacos
ENSACLG00000022555	sf3b3	98	93.254	ENSVVUG00000017922	SF3B3	96	93.254	Vulpes_vulpes
ENSACLG00000022555	sf3b3	98	93.339	ENSXETG00000032869	SF3B3	96	93.339	Xenopus_tropicalis
ENSACLG00000022555	sf3b3	79	98.620	ENSXCOG00000013628	sf3b3	97	98.620	Xiphophorus_couchianus
ENSACLG00000022555	sf3b3	98	98.121	ENSXMAG00000006334	sf3b3	99	98.476	Xiphophorus_maculatus