EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000022560 (Gene tree)
Gene ID: 113014334
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 2318 bases
Position: chr22:7025334-7027651
Accession: 113014334
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000033298	GTP_EFTU	PF00009.27	3.1e-53	1	1
ENSACLP00000033298	GTP_EFTU_D2	PF03144.25	9.1e-14	1	1
ENSACLP00000033298	GTP_EFTU_D3	PF03143.17	8e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000034088	-	1389	-	ENSACLP00000033298	462 (aa)	XP_026011570	UPI0003AFD6AA

Gene Model

Click here to download ENSACLG00000022560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000022560's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000022560	-	96	37.698	ENSACLG00000017598	-	74	37.868
ENSACLG00000022560	-	95	71.655	ENSACLG00000003519	si:dkey-37o8.1	97	71.655
ENSACLG00000022560	-	99	87.662	ENSACLG00000007936	eef1a1b	100	87.662
ENSACLG00000022560	-	95	38.724	ENSACLG00000011643	gspt1l	74	38.724
ENSACLG00000022560	-	99	90.693	ENSACLG00000022529	-	100	90.693
ENSACLG00000022560	-	99	87.446	ENSACLG00000026047	EEF1A1	100	87.446
ENSACLG00000022560	-	95	42.237	ENSACLG00000010469	hbs1l	61	42.237

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000022560	-	98	92.461	ENSAPOG00000004714	-	100	92.408	Acanthochromis_polyacanthus
ENSACLG00000022560	-	90	97.826	ENSACIG00000001219	-	100	97.826	Amphilophus_citrinellus
ENSACLG00000022560	-	99	90.672	ENSAOCG00000022039	-	100	90.672	Amphiprion_ocellaris
ENSACLG00000022560	-	87	94.293	ENSAOCG00000022002	-	100	94.189	Amphiprion_ocellaris
ENSACLG00000022560	-	99	90.672	ENSAPEG00000016361	-	100	90.672	Amphiprion_percula
ENSACLG00000022560	-	98	95.122	ENSATEG00000003244	-	97	95.011	Anabas_testudineus
ENSACLG00000022560	-	100	83.369	WBGene00001168	eef-1A.1	100	83.369	Caenorhabditis_elegans
ENSACLG00000022560	-	100	83.369	WBGene00001169	eef-1A.2	100	83.369	Caenorhabditis_elegans
ENSACLG00000022560	-	99	77.682	ENSCING00000007703	-	99	77.682	Ciona_intestinalis
ENSACLG00000022560	-	98	81.319	ENSCING00000005126	-	100	81.075	Ciona_intestinalis
ENSACLG00000022560	-	98	81.498	ENSCING00000018894	-	99	81.250	Ciona_intestinalis
ENSACLG00000022560	-	99	85.120	ENSCING00000021478	-	99	85.120	Ciona_intestinalis
ENSACLG00000022560	-	98	82.418	ENSCSAVG00000009663	-	100	82.151	Ciona_savignyi
ENSACLG00000022560	-	98	81.046	ENSCSAVG00000003196	-	100	80.810	Ciona_savignyi
ENSACLG00000022560	-	99	76.471	ENSCSAVG00000001085	-	91	76.471	Ciona_savignyi
ENSACLG00000022560	-	100	84.848	ENSCSAVG00000006357	-	100	94.000	Ciona_savignyi
ENSACLG00000022560	-	89	85.749	ENSCSEG00000007972	-	100	85.749	Cynoglossus_semilaevis
ENSACLG00000022560	-	98	94.013	ENSCSEG00000008011	-	100	93.709	Cynoglossus_semilaevis
ENSACLG00000022560	-	90	84.300	ENSCSEG00000007992	-	99	84.300	Cynoglossus_semilaevis
ENSACLG00000022560	-	98	95.344	ENSCVAG00000019356	-	100	95.228	Cyprinodon_variegatus
ENSACLG00000022560	-	98	86.062	FBgn0000557	eEF1alpha2	100	86.147	Drosophila_melanogaster
ENSACLG00000022560	-	100	86.177	FBgn0284245	eEF1alpha1	100	86.177	Drosophila_melanogaster
ENSACLG00000022560	-	99	83.007	ENSEBUG00000015814	-	99	83.007	Eptatretus_burgeri
ENSACLG00000022560	-	98	95.122	ENSFHEG00000015054	-	100	95.011	Fundulus_heteroclitus
ENSACLG00000022560	-	98	94.678	ENSGAFG00000014646	-	100	94.577	Gambusia_affinis
ENSACLG00000022560	-	98	94.457	ENSGACG00000002182	-	100	94.360	Gasterosteus_aculeatus
ENSACLG00000022560	-	99	92.842	ENSGACG00000002143	-	100	92.842	Gasterosteus_aculeatus
ENSACLG00000022560	-	55	99.606	ENSHBUG00000017166	-	95	99.606	Haplochromis_burtoni
ENSACLG00000022560	-	98	94.235	ENSHCOG00000008468	-	100	94.143	Hippocampus_comes
ENSACLG00000022560	-	99	86.087	ENSHCOG00000008489	-	99	86.087	Hippocampus_comes
ENSACLG00000022560	-	98	93.348	ENSLBEG00000002759	-	100	93.275	Labrus_bergylta
ENSACLG00000022560	-	99	84.967	ENSLBEG00000002955	-	99	84.967	Labrus_bergylta
ENSACLG00000022560	-	98	95.787	ENSMAMG00000007715	-	100	95.662	Mastacembelus_armatus
ENSACLG00000022560	-	99	75.877	ENSMMOG00000018160	-	100	86.957	Mola_mola
ENSACLG00000022560	-	98	93.348	ENSMMOG00000001165	-	100	95.455	Mola_mola
ENSACLG00000022560	-	99	86.275	ENSMMOG00000001106	-	99	86.275	Mola_mola
ENSACLG00000022560	-	100	89.177	ENSNBRG00000017346	-	100	89.177	Neolamprologus_brichardi
ENSACLG00000022560	-	76	94.886	ENSONIG00000017760	-	98	94.886	Oreochromis_niloticus
ENSACLG00000022560	-	98	95.344	ENSORLG00000007614	eef1a	100	95.228	Oryzias_latipes
ENSACLG00000022560	-	98	95.122	ENSORLG00015002397	-	100	95.011	Oryzias_latipes_hsok
ENSACLG00000022560	-	98	95.787	ENSOMEG00000018226	-	100	95.662	Oryzias_melastigma
ENSACLG00000022560	-	98	94.248	ENSPMGG00000023911	-	100	98.837	Periophthalmus_magnuspinnatus
ENSACLG00000022560	-	94	49.431	ENSPMGG00000022427	-	97	60.000	Periophthalmus_magnuspinnatus
ENSACLG00000022560	-	98	94.457	ENSPFOG00000003924	-	100	93.705	Poecilia_formosa
ENSACLG00000022560	-	98	94.457	ENSPLAG00000004316	-	100	94.360	Poecilia_latipinna
ENSACLG00000022560	-	98	94.235	ENSPMEG00000001010	-	100	94.143	Poecilia_mexicana
ENSACLG00000022560	-	98	93.792	ENSPREG00000008243	-	100	93.709	Poecilia_reticulata
ENSACLG00000022560	-	100	100.000	ENSPNYG00000007263	-	100	100.000	Pundamilia_nyererei
ENSACLG00000022560	-	95	81.633	YPR080W	TEF1	99	80.392	Saccharomyces_cerevisiae
ENSACLG00000022560	-	95	81.633	YBR118W	TEF2	99	80.392	Saccharomyces_cerevisiae
ENSACLG00000022560	-	98	82.664	ENSSMAG00000018469	-	100	82.816	Scophthalmus_maximus
ENSACLG00000022560	-	53	90.574	ENSSMAG00000016277	-	100	90.551	Scophthalmus_maximus
ENSACLG00000022560	-	98	94.235	ENSSDUG00000008198	-	100	94.143	Seriola_dumerili
ENSACLG00000022560	-	98	92.018	ENSSPAG00000001710	-	100	91.974	Stegastes_partitus
ENSACLG00000022560	-	99	87.146	ENSTRUG00000005066	-	99	87.146	Takifugu_rubripes
ENSACLG00000022560	-	98	94.900	ENSTRUG00000005727	ef-1a	100	94.794	Takifugu_rubripes
ENSACLG00000022560	-	98	96.009	ENSTNIG00000002619	-	100	95.879	Tetraodon_nigroviridis
ENSACLG00000022560	-	99	83.442	ENSTNIG00000002617	-	96	83.442	Tetraodon_nigroviridis
ENSACLG00000022560	-	98	94.457	ENSXCOG00000001542	-	100	98.837	Xiphophorus_couchianus