EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000022609 (Gene tree)
Gene ID: 113029119
Gene Symbol: shrprbck1r
Alias: sipl1-rbck1|zgc:175152
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 12060 bases
Position: chr9:14590739-14602798
Accession: 113029119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000033440	zf-RanBP	PF00641.18	5.4e-07	1	1
ENSACLP00000033396	zf-RanBP	PF00641.18	5.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000034234	-	2085	-	ENSACLP00000033440	694 (aa)	-	-
ENSACLT00000034189	-	2136	-	ENSACLP00000033396	711 (aa)	XP_026035558	UPI000646135C

Gene Model

Click here to download ENSACLG00000022609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000022609's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000022609	shrprbck1r	76	44.925	ENSACLG00000020380	rbck1	98	44.280

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000022609	shrprbck1r	60	58.486	ENSAPOG00000023352	sharpin	95	57.798	Acanthochromis_polyacanthus
ENSACLG00000022609	shrprbck1r	100	84.951	ENSAPOG00000022737	shrprbck1r	100	84.529	Acanthochromis_polyacanthus
ENSACLG00000022609	shrprbck1r	100	91.139	ENSACIG00000002184	shrprbck1r	100	91.139	Amphilophus_citrinellus
ENSACLG00000022609	shrprbck1r	100	86.134	ENSAOCG00000002890	shrprbck1r	100	85.854	Amphiprion_ocellaris
ENSACLG00000022609	shrprbck1r	60	58.391	ENSAOCG00000017464	sharpin	95	57.701	Amphiprion_ocellaris
ENSACLG00000022609	shrprbck1r	60	58.391	ENSAPEG00000004049	sharpin	95	57.701	Amphiprion_percula
ENSACLG00000022609	shrprbck1r	100	86.143	ENSAPEG00000023274	shrprbck1r	100	85.857	Amphiprion_percula
ENSACLG00000022609	shrprbck1r	100	83.262	ENSATEG00000014561	shrprbck1r	100	83.262	Anabas_testudineus
ENSACLG00000022609	shrprbck1r	60	57.541	ENSATEG00000007832	sharpin	88	56.845	Anabas_testudineus
ENSACLG00000022609	shrprbck1r	100	70.204	ENSAMXG00000021016	shrprbck1r	100	70.685	Astyanax_mexicanus
ENSACLG00000022609	shrprbck1r	55	57.436	ENSAMXG00000006229	sharpin	97	58.684	Astyanax_mexicanus
ENSACLG00000022609	shrprbck1r	100	77.131	ENSCSEG00000011306	shrprbck1r	100	77.131	Cynoglossus_semilaevis
ENSACLG00000022609	shrprbck1r	100	80.169	ENSCVAG00000007250	shrprbck1r	100	79.466	Cyprinodon_variegatus
ENSACLG00000022609	shrprbck1r	59	55.607	ENSCVAG00000006586	sharpin	95	54.907	Cyprinodon_variegatus
ENSACLG00000022609	shrprbck1r	55	56.041	ENSDARG00000076995	sharpin	94	56.298	Danio_rerio
ENSACLG00000022609	shrprbck1r	100	70.539	ENSDARG00000059871	shrprbck1r	100	70.954	Danio_rerio
ENSACLG00000022609	shrprbck1r	100	75.140	ENSELUG00000016022	shrprbck1r	100	75.140	Esox_lucius
ENSACLG00000022609	shrprbck1r	59	55.916	ENSFHEG00000013564	sharpin	94	55.220	Fundulus_heteroclitus
ENSACLG00000022609	shrprbck1r	51	59.940	ENSGMOG00000010123	sharpin	91	59.940	Gadus_morhua
ENSACLG00000022609	shrprbck1r	59	44.417	ENSGAFG00000021405	sharpin	95	43.689	Gambusia_affinis
ENSACLG00000022609	shrprbck1r	100	78.481	ENSGAFG00000009309	shrprbck1r	100	77.778	Gambusia_affinis
ENSACLG00000022609	shrprbck1r	77	79.511	ENSGACG00000002544	shrprbck1r	100	79.511	Gasterosteus_aculeatus
ENSACLG00000022609	shrprbck1r	100	99.437	ENSHBUG00000021933	shrprbck1r	100	99.437	Haplochromis_burtoni
ENSACLG00000022609	shrprbck1r	62	51.794	ENSHCOG00000018847	sharpin	84	52.262	Hippocampus_comes
ENSACLG00000022609	shrprbck1r	96	68.831	ENSIPUG00000014247	shrprbck1r	97	67.278	Ictalurus_punctatus
ENSACLG00000022609	shrprbck1r	51	72.973	ENSIPUG00000011951	sharpin	97	72.973	Ictalurus_punctatus
ENSACLG00000022609	shrprbck1r	60	56.977	ENSKMAG00000015204	sharpin	76	57.349	Kryptolebias_marmoratus
ENSACLG00000022609	shrprbck1r	100	78.641	ENSKMAG00000015215	shrprbck1r	100	78.641	Kryptolebias_marmoratus
ENSACLG00000022609	shrprbck1r	100	84.388	ENSLBEG00000016876	shrprbck1r	100	84.388	Labrus_bergylta
ENSACLG00000022609	shrprbck1r	60	58.542	ENSLBEG00000016624	sharpin	96	57.859	Labrus_bergylta
ENSACLG00000022609	shrprbck1r	95	52.915	ENSLACG00000010948	-	97	52.624	Latimeria_chalumnae
ENSACLG00000022609	shrprbck1r	100	69.188	ENSLOCG00000008910	shrprbck1r	100	69.464	Lepisosteus_oculatus
ENSACLG00000022609	shrprbck1r	60	43.702	ENSMAMG00000014645	sharpin	95	47.484	Mastacembelus_armatus
ENSACLG00000022609	shrprbck1r	100	81.857	ENSMAMG00000022930	shrprbck1r	100	81.857	Mastacembelus_armatus
ENSACLG00000022609	shrprbck1r	100	99.859	ENSMZEG00005021257	shrprbck1r	100	99.859	Maylandia_zebra
ENSACLG00000022609	shrprbck1r	59	49.673	ENSMMOG00000016788	sharpin	85	72.414	Mola_mola
ENSACLG00000022609	shrprbck1r	100	79.545	ENSMMOG00000003764	shrprbck1r	100	79.545	Mola_mola
ENSACLG00000022609	shrprbck1r	57	44.789	ENSMALG00000020528	sharpin	96	45.455	Monopterus_albus
ENSACLG00000022609	shrprbck1r	95	82.916	ENSMALG00000008861	shrprbck1r	95	82.916	Monopterus_albus
ENSACLG00000022609	shrprbck1r	100	98.875	ENSNBRG00000002270	shrprbck1r	100	98.875	Neolamprologus_brichardi
ENSACLG00000022609	shrprbck1r	100	97.609	ENSONIG00000014401	shrprbck1r	100	97.609	Oreochromis_niloticus
ENSACLG00000022609	shrprbck1r	55	55.366	ENSONIG00000009626	-	97	54.878	Oreochromis_niloticus
ENSACLG00000022609	shrprbck1r	100	79.184	ENSORLG00000007392	shrprbck1r	100	78.622	Oryzias_latipes
ENSACLG00000022609	shrprbck1r	60	56.177	ENSORLG00000017281	sharpin	95	55.711	Oryzias_latipes
ENSACLG00000022609	shrprbck1r	60	56.148	ENSORLG00020000801	sharpin	95	55.684	Oryzias_latipes_hni
ENSACLG00000022609	shrprbck1r	100	78.622	ENSORLG00020018619	shrprbck1r	100	78.059	Oryzias_latipes_hni
ENSACLG00000022609	shrprbck1r	100	78.622	ENSORLG00015018865	shrprbck1r	100	78.481	Oryzias_latipes_hsok
ENSACLG00000022609	shrprbck1r	60	56.381	ENSORLG00015009860	sharpin	95	55.916	Oryzias_latipes_hsok
ENSACLG00000022609	shrprbck1r	100	80.309	ENSOMEG00000012749	shrprbck1r	100	79.747	Oryzias_melastigma
ENSACLG00000022609	shrprbck1r	59	45.455	ENSOMEG00000005729	sharpin	89	52.632	Oryzias_melastigma
ENSACLG00000022609	shrprbck1r	100	73.259	ENSPKIG00000006933	shrprbck1r	100	73.259	Paramormyrops_kingsleyae
ENSACLG00000022609	shrprbck1r	65	60.042	ENSPKIG00000018308	-	96	59.831	Paramormyrops_kingsleyae
ENSACLG00000022609	shrprbck1r	100	76.596	ENSPMGG00000013254	shrprbck1r	100	76.312	Periophthalmus_magnuspinnatus
ENSACLG00000022609	shrprbck1r	100	79.184	ENSPFOG00000004214	shrprbck1r	100	78.481	Poecilia_formosa
ENSACLG00000022609	shrprbck1r	59	56.019	ENSPFOG00000015253	sharpin	95	55.324	Poecilia_formosa
ENSACLG00000022609	shrprbck1r	100	79.044	ENSPLAG00000020523	shrprbck1r	100	78.340	Poecilia_latipinna
ENSACLG00000022609	shrprbck1r	59	56.250	ENSPLAG00000000423	sharpin	95	55.556	Poecilia_latipinna
ENSACLG00000022609	shrprbck1r	100	77.825	ENSPMEG00000006877	shrprbck1r	100	77.119	Poecilia_mexicana
ENSACLG00000022609	shrprbck1r	59	44.226	ENSPMEG00000023030	sharpin	89	50.000	Poecilia_mexicana
ENSACLG00000022609	shrprbck1r	59	55.916	ENSPREG00000009702	sharpin	95	55.220	Poecilia_reticulata
ENSACLG00000022609	shrprbck1r	100	77.699	ENSPREG00000014689	shrprbck1r	100	76.989	Poecilia_reticulata
ENSACLG00000022609	shrprbck1r	100	99.578	ENSPNYG00000022601	shrprbck1r	100	99.578	Pundamilia_nyererei
ENSACLG00000022609	shrprbck1r	100	68.989	ENSPNAG00000007847	shrprbck1r	100	69.178	Pygocentrus_nattereri
ENSACLG00000022609	shrprbck1r	54	59.091	ENSPNAG00000002911	sharpin	99	59.200	Pygocentrus_nattereri
ENSACLG00000022609	shrprbck1r	60	70.833	ENSSFOG00015004028	sharpin	99	54.800	Scleropages_formosus
ENSACLG00000022609	shrprbck1r	77	63.109	ENSSFOG00015014150	-	96	62.617	Scleropages_formosus
ENSACLG00000022609	shrprbck1r	100	80.641	ENSSMAG00000018085	shrprbck1r	100	80.641	Scophthalmus_maximus
ENSACLG00000022609	shrprbck1r	60	45.455	ENSSDUG00000019039	sharpin	96	44.755	Seriola_dumerili
ENSACLG00000022609	shrprbck1r	100	85.935	ENSSDUG00000002959	shrprbck1r	100	85.935	Seriola_dumerili
ENSACLG00000022609	shrprbck1r	100	85.232	ENSSLDG00000009026	shrprbck1r	100	85.232	Seriola_lalandi_dorsalis
ENSACLG00000022609	shrprbck1r	96	83.700	ENSSPAG00000016097	shrprbck1r	99	83.407	Stegastes_partitus
ENSACLG00000022609	shrprbck1r	100	81.295	ENSTRUG00000006949	shrprbck1r	100	81.295	Takifugu_rubripes
ENSACLG00000022609	shrprbck1r	60	52.914	ENSTRUG00000011046	sharpin	96	52.347	Takifugu_rubripes
ENSACLG00000022609	shrprbck1r	55	56.716	ENSTNIG00000008521	sharpin	94	56.219	Tetraodon_nigroviridis
ENSACLG00000022609	shrprbck1r	52	56.250	ENSXCOG00000015019	sharpin	96	56.250	Xiphophorus_couchianus
ENSACLG00000022609	shrprbck1r	100	77.650	ENSXCOG00000006701	shrprbck1r	100	76.934	Xiphophorus_couchianus
ENSACLG00000022609	shrprbck1r	59	56.351	ENSXMAG00000022076	sharpin	95	55.116	Xiphophorus_maculatus
ENSACLG00000022609	shrprbck1r	100	77.507	ENSXMAG00000018972	shrprbck1r	100	76.791	Xiphophorus_maculatus