EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000022869 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 11047 bases
Position: chr19:25151026-25162072
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000033739	MMR_HSR1	PF01926.23	0.00018	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000034541	-	3925	-	ENSACLP00000033739	158 (aa)	-	-

Gene Model

Click here to download ENSACLG00000022869's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000022869's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000022869	-	92	44.521	ENSACLG00000012519	-	80	44.521
ENSACLG00000022869	-	87	34.286	ENSACLG00000024227	arl13b	59	34.286
ENSACLG00000022869	-	82	36.842	ENSACLG00000013053	sar1ab	66	36.842
ENSACLG00000022869	-	95	65.333	ENSACLG00000005705	arf5	83	65.333
ENSACLG00000022869	-	88	41.958	ENSACLG00000020245	-	76	41.958
ENSACLG00000022869	-	95	68.000	ENSACLG00000022124	arf2b	83	68.000
ENSACLG00000022869	-	81	45.113	ENSACLG00000024991	arl4d	66	45.113
ENSACLG00000022869	-	95	69.333	ENSACLG00000024971	arf3b	83	69.333
ENSACLG00000022869	-	89	53.846	ENSACLG00000015415	-	69	53.846
ENSACLG00000022869	-	95	69.333	ENSACLG00000006072	-	83	69.333
ENSACLG00000022869	-	82	38.346	ENSACLG00000014649	sar1b	66	38.346
ENSACLG00000022869	-	82	36.090	ENSACLG00000005011	-	66	36.090
ENSACLG00000022869	-	80	32.117	ENSACLG00000021470	rab22a	66	32.117
ENSACLG00000022869	-	93	46.259	ENSACLG00000027139	arl3	81	46.259
ENSACLG00000022869	-	89	36.879	ENSACLG00000011996	arl8a	75	36.879
ENSACLG00000022869	-	83	40.741	ENSACLG00000026984	arl14	67	40.741
ENSACLG00000022869	-	100	57.595	ENSACLG00000009822	-	83	57.595
ENSACLG00000022869	-	73	30.400	ENSACLG00000002706	rab5c	55	30.400
ENSACLG00000022869	-	75	30.000	ENSACLG00000018066	rab5aa	58	30.000
ENSACLG00000022869	-	95	62.667	ENSACLG00000025604	-	83	62.667
ENSACLG00000022869	-	95	68.000	ENSACLG00000004123	-	83	68.000
ENSACLG00000022869	-	95	43.791	ENSACLG00000000922	arl5c	93	43.791
ENSACLG00000022869	-	97	54.545	ENSACLG00000008188	arl1	85	54.545
ENSACLG00000022869	-	87	51.079	ENSACLG00000021338	arl2	75	51.079
ENSACLG00000022869	-	100	42.331	ENSACLG00000014218	arl4cb	85	42.331
ENSACLG00000022869	-	93	40.909	ENSACLG00000016659	-	77	40.909
ENSACLG00000022869	-	95	45.098	ENSACLG00000000787	arl8	85	45.098
ENSACLG00000022869	-	95	67.974	ENSACLG00000017387	-	85	67.974
ENSACLG00000022869	-	88	41.958	ENSACLG00000024656	ARL6	77	41.958
ENSACLG00000022869	-	82	33.577	ENSACLG00000002442	arfrp1	68	33.577
ENSACLG00000022869	-	95	43.791	ENSACLG00000019945	arl5a	85	43.791
ENSACLG00000022869	-	89	39.007	ENSACLG00000021872	arl8bb	76	39.007
ENSACLG00000022869	-	100	41.463	ENSACLG00000014159	-	85	41.463
ENSACLG00000022869	-	93	41.558	ENSACLG00000011811	-	76	41.558
ENSACLG00000022869	-	92	45.205	ENSACLG00000008835	arl3l2	78	45.205
ENSACLG00000022869	-	91	36.806	ENSACLG00000013597	arl8ba	77	36.806

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000022869	-	96	98.013	ENSATEG00000000391	-	93	98.013	Anabas_testudineus
ENSACLG00000022869	-	88	100.000	ENSELUG00000000436	-	87	100.000	Esox_lucius
ENSACLG00000022869	-	95	99.333	ENSIPUG00000020344	-	93	99.333	Ictalurus_punctatus
ENSACLG00000022869	-	94	100.000	ENSONIG00000000864	-	94	100.000	Oreochromis_niloticus
ENSACLG00000022869	-	88	99.281	ENSORLG00015004028	-	89	99.281	Oryzias_latipes_hsok
ENSACLG00000022869	-	94	100.000	ENSOMEG00000022678	-	91	100.000	Oryzias_melastigma
ENSACLG00000022869	-	88	100.000	ENSPLAG00000007217	-	95	100.000	Poecilia_latipinna
ENSACLG00000022869	-	86	95.588	ENSPMEG00000017081	-	86	95.588	Poecilia_mexicana
ENSACLG00000022869	-	89	98.571	ENSTRUG00000024749	-	100	98.571	Takifugu_rubripes
ENSACLG00000022869	-	94	95.973	ENSTRUG00000020509	-	77	95.973	Takifugu_rubripes
ENSACLG00000022869	-	87	100.000	ENSXMAG00000028437	-	91	100.000	Xiphophorus_maculatus