EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000022932 (Gene tree)
Gene ID: 113010195
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC113010195
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 17778 bases
Position: chr18:1925940-1943717
Accession: 113010195
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000033858	MMR_HSR1	PF01926.23	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000034665	-	8610	-	ENSACLP00000033858	1221 (aa)	XP_026004931	UPI000E427F38
ENSACLT00000034690	-	1629	-	ENSACLP00000033884	542 (aa)	-	-

Gene Model

Click here to download ENSACLG00000022932's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000022932's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000022932	-	99	68.003	ENSACLG00000023475	-	95	68.003
ENSACLG00000022932	-	99	68.167	ENSACLG00000023483	-	96	68.167
ENSACLG00000022932	-	99	75.984	ENSACLG00000022989	-	99	75.984

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000022932	-	82	44.314	ENSACAG00000028691	-	97	44.314	Anolis_carolinensis
ENSACLG00000022932	-	99	42.454	ENSAMXG00000033978	-	95	42.776	Astyanax_mexicanus
ENSACLG00000022932	-	99	42.500	ENSAMXG00000031410	-	95	42.581	Astyanax_mexicanus
ENSACLG00000022932	-	74	38.720	ENSCPBG00000009862	-	82	38.720	Chrysemys_picta_bellii
ENSACLG00000022932	-	99	41.714	ENSELUG00000005671	-	96	41.714	Esox_lucius
ENSACLG00000022932	-	99	52.679	ENSELUG00000007062	-	95	52.760	Esox_lucius
ENSACLG00000022932	-	90	46.643	ENSGAGG00000006690	-	99	46.822	Gopherus_agassizii
ENSACLG00000022932	-	99	64.783	ENSKMAG00000016912	-	96	64.783	Kryptolebias_marmoratus
ENSACLG00000022932	-	99	66.721	ENSKMAG00000011534	-	98	66.967	Kryptolebias_marmoratus
ENSACLG00000022932	-	99	42.101	ENSPNAG00000004915	-	96	42.274	Pygocentrus_nattereri
ENSACLG00000022932	-	99	64.437	ENSSMAG00000004655	-	97	64.519	Scophthalmus_maximus
ENSACLG00000022932	-	99	68.438	ENSSDUG00000017025	-	98	68.438	Seriola_dumerili
ENSACLG00000022932	-	87	74.000	ENSSLDG00000002567	-	95	74.000	Seriola_lalandi_dorsalis
ENSACLG00000022932	-	59	39.320	ENSSPUG00000001864	-	80	39.320	Sphenodon_punctatus
ENSACLG00000022932	-	73	44.460	ENSSPUG00000001872	-	98	44.460	Sphenodon_punctatus
ENSACLG00000022932	-	99	62.701	ENSXMAG00000024425	-	98	62.701	Xiphophorus_maculatus