EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACLG00000022989 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Astatotilapia_calliptera
Status
putative
Strand
Minus strand
Length
196333 bases
Position
chr18:1957534-2153866
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACLP00000033939MMR_HSR1PF01926.238e-0711
ENSACLP00000033950MMR_HSR1PF01926.238e-0711
ENSACLP00000033959MMR_HSR1PF01926.238e-0711
ENSACLP00000033942MMR_HSR1PF01926.238e-0711
ENSACLP00000033956MMR_HSR1PF01926.238e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACLT00000034746-7978-ENSACLP000000339391258 (aa)--
ENSACLT00000034757-8014-ENSACLP000000339501258 (aa)--
ENSACLT00000034763-8412-ENSACLP000000339561257 (aa)--
ENSACLT00000034766-8032-ENSACLP000000339591258 (aa)--
ENSACLT00000034749-8118-ENSACLP000000339421257 (aa)--
Gene Model
Click here to download ENSACLG00000022989's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000022989's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACLG00000022989-9975.984ENSACLG00000022932-9975.984
ENSACLG00000022989-9969.658ENSACLG00000023475-9569.658
ENSACLG00000022989-9970.175ENSACLG00000023483-9770.056
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACLG00000022989-7679.645ENSHBUG00000004854-9879.645Haplochromis_burtoni
ENSACLG00000022989-9966.481ENSLBEG00000019733-9766.242Labrus_bergylta
ENSACLG00000022989-8268.876ENSLBEG00000005517-9968.876Labrus_bergylta
ENSACLG00000022989-9844.577ENSLOCG00000014656-9644.577Lepisosteus_oculatus
ENSACLG00000022989-9969.777ENSMZEG00005020282-9769.658Maylandia_zebra
ENSACLG00000022989-9969.500ENSMZEG00005020277-9569.500Maylandia_zebra
ENSACLG00000022989-9941.733ENSSDUG00000003791-9741.976Seriola_dumerili
ENSACLG00000022989-9141.299ENSSLDG00000000458-9741.212Seriola_lalandi_dorsalis
ENSACLG00000022989-9942.641ENSSLDG00000006728-9642.812Seriola_lalandi_dorsalis
ENSACLG00000022989-9941.456ENSSLDG00000006974-9741.477Seriola_lalandi_dorsalis

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