EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000023027 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 5356 bases
Position: chr3:27574462-27579817
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000034005	RVT_1	PF00078.27	6.1e-25	1	1
ENSACLP00000034005	RNase_H	PF00075.24	2.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000034812	-	5356	-	ENSACLP00000034005	1233 (aa)	-	-

Gene Model

Click here to download ENSACLG00000023027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000023027's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000023027	-	87	31.701	ENSACLG00000014318	-	80	31.701
ENSACLG00000023027	-	100	99.108	ENSACLG00000006254	-	89	99.108
ENSACLG00000023027	-	50	33.333	ENSACLG00000005138	-	69	33.701
ENSACLG00000023027	-	94	57.265	ENSACLG00000003782	-	86	57.373

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000023027	-	71	38.393	ENSAPEG00000000438	-	98	38.393	Amphiprion_percula
ENSACLG00000023027	-	70	37.868	ENSAMXG00000038483	-	66	37.868	Astyanax_mexicanus
ENSACLG00000023027	-	93	32.995	ENSAMXG00000040526	-	98	32.523	Astyanax_mexicanus
ENSACLG00000023027	-	83	50.874	ENSAMXG00000033455	-	86	50.874	Astyanax_mexicanus
ENSACLG00000023027	-	74	35.560	ENSBTAG00000052165	-	91	35.237	Bos_taurus
ENSACLG00000023027	-	55	31.171	ENSCPBG00000009921	-	94	31.171	Chrysemys_picta_bellii
ENSACLG00000023027	-	74	34.202	ENSCPBG00000009184	-	98	34.202	Chrysemys_picta_bellii
ENSACLG00000023027	-	96	58.494	ENSCSEG00000018136	-	96	58.494	Cynoglossus_semilaevis
ENSACLG00000023027	-	96	58.494	ENSCSEG00000012922	-	96	58.494	Cynoglossus_semilaevis
ENSACLG00000023027	-	96	58.494	ENSCSEG00000009059	-	96	58.494	Cynoglossus_semilaevis
ENSACLG00000023027	-	86	33.579	ENSCSEG00000019226	-	59	33.580	Cynoglossus_semilaevis
ENSACLG00000023027	-	96	58.494	ENSCSEG00000013867	-	96	58.494	Cynoglossus_semilaevis
ENSACLG00000023027	-	96	58.494	ENSCSEG00000011566	-	96	58.494	Cynoglossus_semilaevis
ENSACLG00000023027	-	82	33.836	ENSECAG00000034459	-	92	33.836	Equus_caballus
ENSACLG00000023027	-	71	32.481	ENSGALG00000053504	-	94	31.969	Gallus_gallus
ENSACLG00000023027	-	71	34.076	ENSGALG00000050905	-	94	34.076	Gallus_gallus
ENSACLG00000023027	-	89	36.140	ENSLBEG00000013565	-	82	36.140	Labrus_bergylta
ENSACLG00000023027	-	84	60.653	ENSMAMG00000010978	-	85	60.653	Mastacembelus_armatus
ENSACLG00000023027	-	86	31.536	ENSMODG00000027641	-	96	31.627	Monodelphis_domestica
ENSACLG00000023027	-	57	31.994	ENSMODG00000028692	-	98	31.440	Monodelphis_domestica
ENSACLG00000023027	-	60	32.100	ENSMODG00000027664	-	98	31.572	Monodelphis_domestica
ENSACLG00000023027	-	67	30.678	ENSMODG00000027851	-	97	30.492	Monodelphis_domestica
ENSACLG00000023027	-	85	31.831	ENSMODG00000028385	-	95	31.739	Monodelphis_domestica
ENSACLG00000023027	-	51	36.940	ENSMODG00000029647	-	79	36.478	Monodelphis_domestica
ENSACLG00000023027	-	86	31.714	ENSMODG00000029722	-	97	31.718	Monodelphis_domestica
ENSACLG00000023027	-	56	30.447	ENSMODG00000028191	-	99	30.307	Monodelphis_domestica
ENSACLG00000023027	-	86	31.810	ENSMODG00000028573	-	96	31.718	Monodelphis_domestica
ENSACLG00000023027	-	64	31.312	ENSMODG00000029316	-	96	30.941	Monodelphis_domestica
ENSACLG00000023027	-	86	31.718	ENSMODG00000027428	-	87	31.627	Monodelphis_domestica
ENSACLG00000023027	-	59	35.013	ENSMODG00000028504	-	82	34.387	Monodelphis_domestica
ENSACLG00000023027	-	56	30.726	ENSMODG00000029516	-	99	30.726	Monodelphis_domestica
ENSACLG00000023027	-	85	33.085	ENSMODG00000027661	-	91	32.746	Monodelphis_domestica
ENSACLG00000023027	-	61	32.258	ENSMODG00000027448	-	94	31.742	Monodelphis_domestica
ENSACLG00000023027	-	56	30.587	ENSMODG00000029806	-	99	30.307	Monodelphis_domestica
ENSACLG00000023027	-	54	33.382	ENSMODG00000028686	-	91	33.040	Monodelphis_domestica
ENSACLG00000023027	-	86	31.901	ENSMODG00000029698	-	96	31.810	Monodelphis_domestica
ENSACLG00000023027	-	56	30.447	ENSMODG00000027329	-	99	30.307	Monodelphis_domestica
ENSACLG00000023027	-	85	31.463	ENSMODG00000029740	-	96	31.371	Monodelphis_domestica
ENSACLG00000023027	-	57	34.910	ENSONIG00000021274	-	98	33.936	Oreochromis_niloticus
ENSACLG00000023027	-	86	66.479	ENSONIG00000021180	-	89	66.479	Oreochromis_niloticus
ENSACLG00000023027	-	82	49.951	ENSORLG00020007796	-	67	49.951	Oryzias_latipes_hni
ENSACLG00000023027	-	70	33.145	ENSOMEG00000005516	-	99	33.407	Oryzias_melastigma
ENSACLG00000023027	-	94	32.667	ENSOMEG00000021132	-	86	31.954	Oryzias_melastigma
ENSACLG00000023027	-	52	31.700	ENSOARG00000015892	-	80	31.707	Ovis_aries
ENSACLG00000023027	-	62	31.679	ENSOARG00000014856	-	83	31.679	Ovis_aries
ENSACLG00000023027	-	55	30.460	ENSOARG00000001648	-	95	30.460	Ovis_aries
ENSACLG00000023027	-	62	31.679	ENSOARG00000009849	-	82	31.679	Ovis_aries
ENSACLG00000023027	-	50	34.906	ENSOARG00000015221	-	73	34.665	Ovis_aries
ENSACLG00000023027	-	82	35.356	ENSPSIG00000001866	-	91	35.391	Pelodiscus_sinensis
ENSACLG00000023027	-	52	32.774	ENSSSCG00000034697	-	50	32.403	Sus_scrofa
ENSACLG00000023027	-	84	34.532	ENSSSCG00000034853	-	89	34.342	Sus_scrofa
ENSACLG00000023027	-	72	56.180	ENSXMAG00000024544	-	94	56.117	Xiphophorus_maculatus
ENSACLG00000023027	-	94	38.171	ENSXMAG00000022532	-	85	38.171	Xiphophorus_maculatus