EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000023077 (Gene tree)
Gene ID: 113022946
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 45170 bases
Position: chr5:31381135-31426304
Accession: 113022946
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000034088	SHQ1	PF04925.15	5.6e-67	1	1
ENSACLP00000034074	SHQ1	PF04925.15	8e-61	1	2
ENSACLP00000034074	SHQ1	PF04925.15	8e-61	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000034895	-	2108	-	ENSACLP00000034088	625 (aa)	-	-
ENSACLT00000034882	-	2165	-	ENSACLP00000034074	631 (aa)	XP_026024691	UPI000E42178C

Gene Model

Click here to download ENSACLG00000023077's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000023077's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000023077	shq1	69	57.399	ENSG00000144736	SHQ1	96	68.750	Homo_sapiens
ENSACLG00000023077	shq1	100	74.375	ENSAPOG00000000397	shq1	100	77.414	Acanthochromis_polyacanthus
ENSACLG00000023077	shq1	72	57.768	ENSAMEG00000015140	SHQ1	76	59.725	Ailuropoda_melanoleuca
ENSACLG00000023077	shq1	100	81.201	ENSACIG00000021249	shq1	100	84.603	Amphilophus_citrinellus
ENSACLG00000023077	shq1	100	74.806	ENSAOCG00000023311	shq1	100	78.013	Amphiprion_ocellaris
ENSACLG00000023077	shq1	100	74.804	ENSAPEG00000021686	shq1	100	78.033	Amphiprion_percula
ENSACLG00000023077	shq1	99	70.458	ENSATEG00000008475	shq1	99	73.344	Anabas_testudineus
ENSACLG00000023077	shq1	74	53.766	ENSAPLG00000013926	SHQ1	87	57.684	Anas_platyrhynchos
ENSACLG00000023077	shq1	68	61.432	ENSACAG00000014809	SHQ1	66	61.161	Anolis_carolinensis
ENSACLG00000023077	shq1	79	39.157	ENSANAG00000030500	-	74	43.448	Aotus_nancymaae
ENSACLG00000023077	shq1	76	57.557	ENSANAG00000029241	SHQ1	76	60.090	Aotus_nancymaae
ENSACLG00000023077	shq1	68	64.169	ENSAMXG00000043822	shq1	75	64.450	Astyanax_mexicanus
ENSACLG00000023077	shq1	94	50.000	ENSBTAG00000005436	SHQ1	76	60.179	Bos_taurus
ENSACLG00000023077	shq1	69	56.951	ENSCJAG00000015131	SHQ1	76	60.090	Callithrix_jacchus
ENSACLG00000023077	shq1	62	60.150	ENSCAFG00000006434	SHQ1	76	59.865	Canis_familiaris
ENSACLG00000023077	shq1	62	60.401	ENSCAFG00020016743	SHQ1	76	60.090	Canis_lupus_dingo
ENSACLG00000023077	shq1	94	49.592	ENSCHIG00000012271	SHQ1	71	59.519	Capra_hircus
ENSACLG00000023077	shq1	69	53.846	ENSTSYG00000014439	SHQ1	77	56.885	Carlito_syrichta
ENSACLG00000023077	shq1	87	44.891	ENSCAPG00000009343	SHQ1	71	54.856	Cavia_aperea
ENSACLG00000023077	shq1	94	47.326	ENSCPOG00000011443	SHQ1	74	59.954	Cavia_porcellus
ENSACLG00000023077	shq1	69	49.438	ENSCCAG00000027080	SHQ1	75	51.345	Cebus_capucinus
ENSACLG00000023077	shq1	79	40.882	ENSCCAG00000036087	-	74	44.804	Cebus_capucinus
ENSACLG00000023077	shq1	65	62.110	ENSCATG00000041238	SHQ1	76	61.211	Cercocebus_atys
ENSACLG00000023077	shq1	74	55.696	ENSCLAG00000004206	SHQ1	76	59.417	Chinchilla_lanigera
ENSACLG00000023077	shq1	51	60.061	ENSCSAG00000011514	SHQ1	72	59.104	Chlorocebus_sabaeus
ENSACLG00000023077	shq1	73	54.797	ENSCPBG00000006441	SHQ1	71	59.729	Chrysemys_picta_bellii
ENSACLG00000023077	shq1	66	40.094	ENSCING00000008013	-	97	40.498	Ciona_intestinalis
ENSACLG00000023077	shq1	66	37.292	ENSCSAVG00000002332	-	99	39.540	Ciona_savignyi
ENSACLG00000023077	shq1	80	53.346	ENSCANG00000039295	SHQ1	77	60.762	Colobus_angolensis_palliatus
ENSACLG00000023077	shq1	74	55.368	ENSCGRG00001012583	Shq1	78	58.202	Cricetulus_griseus_chok1gshd
ENSACLG00000023077	shq1	74	55.368	ENSCGRG00000009849	Shq1	78	58.202	Cricetulus_griseus_crigri
ENSACLG00000023077	shq1	97	69.243	ENSCSEG00000007829	shq1	98	69.951	Cynoglossus_semilaevis
ENSACLG00000023077	shq1	99	66.933	ENSCVAG00000020049	shq1	99	71.189	Cyprinodon_variegatus
ENSACLG00000023077	shq1	95	53.018	ENSDARG00000058522	shq1	98	52.581	Danio_rerio
ENSACLG00000023077	shq1	92	49.916	ENSDNOG00000033937	SHQ1	75	60.731	Dasypus_novemcinctus
ENSACLG00000023077	shq1	69	50.897	ENSETEG00000005766	SHQ1	76	53.196	Echinops_telfairi
ENSACLG00000023077	shq1	63	44.913	ENSEBUG00000005445	shq1	79	48.725	Eptatretus_burgeri
ENSACLG00000023077	shq1	74	56.695	ENSEASG00005002237	SHQ1	76	60.674	Equus_asinus_asinus
ENSACLG00000023077	shq1	74	56.695	ENSECAG00000015673	SHQ1	75	60.674	Equus_caballus
ENSACLG00000023077	shq1	73	57.203	ENSEEUG00000010568	SHQ1	76	61.036	Erinaceus_europaeus
ENSACLG00000023077	shq1	98	58.333	ENSELUG00000003476	shq1	99	61.450	Esox_lucius
ENSACLG00000023077	shq1	79	54.207	ENSFCAG00000012781	SHQ1	77	60.360	Felis_catus
ENSACLG00000023077	shq1	66	62.619	ENSFALG00000013428	SHQ1	72	62.500	Ficedula_albicollis
ENSACLG00000023077	shq1	67	58.605	ENSFDAG00000005595	SHQ1	69	58.315	Fukomys_damarensis
ENSACLG00000023077	shq1	95	70.284	ENSFHEG00000017552	shq1	100	70.370	Fundulus_heteroclitus
ENSACLG00000023077	shq1	62	76.093	ENSGMOG00000007350	shq1	100	75.578	Gadus_morhua
ENSACLG00000023077	shq1	74	55.672	ENSGALG00000007798	SHQ1	71	60.321	Gallus_gallus
ENSACLG00000023077	shq1	62	80.720	ENSGACG00000011797	shq1	100	80.463	Gasterosteus_aculeatus
ENSACLG00000023077	shq1	69	57.399	ENSGGOG00000034818	SHQ1	76	60.538	Gorilla_gorilla
ENSACLG00000023077	shq1	98	98.854	ENSHBUG00000010857	shq1	100	99.003	Haplochromis_burtoni
ENSACLG00000023077	shq1	92	46.645	ENSHGLG00000003637	SHQ1	68	59.502	Heterocephalus_glaber_female
ENSACLG00000023077	shq1	92	46.798	ENSHGLG00100011957	SHQ1	68	59.502	Heterocephalus_glaber_male
ENSACLG00000023077	shq1	99	60.703	ENSHCOG00000010799	shq1	99	63.149	Hippocampus_comes
ENSACLG00000023077	shq1	70	66.667	ENSIPUG00000001247	shq1	76	66.667	Ictalurus_punctatus
ENSACLG00000023077	shq1	70	55.357	ENSSTOG00000010043	SHQ1	81	57.399	Ictidomys_tridecemlineatus
ENSACLG00000023077	shq1	69	56.629	ENSJJAG00000017611	Shq1	76	60.183	Jaculus_jaculus
ENSACLG00000023077	shq1	100	68.454	ENSKMAG00000004457	shq1	100	71.405	Kryptolebias_marmoratus
ENSACLG00000023077	shq1	73	59.149	ENSLACG00000014243	SHQ1	66	63.039	Latimeria_chalumnae
ENSACLG00000023077	shq1	99	53.464	ENSLOCG00000009970	shq1	99	55.906	Lepisosteus_oculatus
ENSACLG00000023077	shq1	69	40.449	ENSMFAG00000037396	-	74	42.825	Macaca_fascicularis
ENSACLG00000023077	shq1	65	61.871	ENSMFAG00000039148	SHQ1	76	60.987	Macaca_fascicularis
ENSACLG00000023077	shq1	57	60.976	ENSMMUG00000009571	SHQ1	71	60.050	Macaca_mulatta
ENSACLG00000023077	shq1	70	40.402	ENSMMUG00000021761	-	74	42.825	Macaca_mulatta
ENSACLG00000023077	shq1	65	61.871	ENSMNEG00000032667	SHQ1	76	60.987	Macaca_nemestrina
ENSACLG00000023077	shq1	65	61.871	ENSMLEG00000038493	SHQ1	76	60.987	Mandrillus_leucophaeus
ENSACLG00000023077	shq1	96	75.606	ENSMAMG00000023432	shq1	96	74.960	Mastacembelus_armatus
ENSACLG00000023077	shq1	100	99.842	ENSMZEG00005008649	shq1	100	99.842	Maylandia_zebra
ENSACLG00000023077	shq1	74	55.556	ENSMGAG00000009640	SHQ1	72	59.954	Meleagris_gallopavo
ENSACLG00000023077	shq1	74	55.579	ENSMAUG00000022030	Shq1	78	58.427	Mesocricetus_auratus
ENSACLG00000023077	shq1	95	47.917	ENSMICG00000009224	SHQ1	76	59.641	Microcebus_murinus
ENSACLG00000023077	shq1	79	54.706	ENSMOCG00000017836	Shq1	78	58.520	Microtus_ochrogaster
ENSACLG00000023077	shq1	95	69.950	ENSMMOG00000010569	shq1	99	69.616	Mola_mola
ENSACLG00000023077	shq1	79	52.794	ENSMODG00000003926	SHQ1	78	59.132	Monodelphis_domestica
ENSACLG00000023077	shq1	99	70.794	ENSMALG00000008870	shq1	99	73.877	Monopterus_albus
ENSACLG00000023077	shq1	79	53.438	MGP_CAROLIEiJ_G0028689	Shq1	78	57.978	Mus_caroli
ENSACLG00000023077	shq1	79	53.242	ENSMUSG00000035378	Shq1	78	57.978	Mus_musculus
ENSACLG00000023077	shq1	75	54.451	MGP_PahariEiJ_G0022440	Shq1	78	58.296	Mus_pahari
ENSACLG00000023077	shq1	79	53.438	MGP_SPRETEiJ_G0029717	Shq1	78	58.202	Mus_spretus
ENSACLG00000023077	shq1	92	47.855	ENSMPUG00000017006	SHQ1	75	59.551	Mustela_putorius_furo
ENSACLG00000023077	shq1	67	54.378	ENSMLUG00000013539	SHQ1	74	59.231	Myotis_lucifugus
ENSACLG00000023077	shq1	79	46.414	ENSNGAG00000023317	Shq1	77	52.273	Nannospalax_galili
ENSACLG00000023077	shq1	82	98.246	ENSNBRG00000024004	shq1	100	98.246	Neolamprologus_brichardi
ENSACLG00000023077	shq1	80	53.920	ENSNLEG00000002731	SHQ1	76	60.762	Nomascus_leucogenys
ENSACLG00000023077	shq1	69	54.630	ENSMEUG00000009350	-	70	54.630	Notamacropus_eugenii
ENSACLG00000023077	shq1	72	58.901	ENSODEG00000009192	SHQ1	81	59.865	Octodon_degus
ENSACLG00000023077	shq1	96	97.671	ENSONIG00000020264	shq1	100	97.671	Oreochromis_niloticus
ENSACLG00000023077	shq1	95	49.273	ENSOCUG00000016695	SHQ1	76	60.762	Oryctolagus_cuniculus
ENSACLG00000023077	shq1	99	62.141	ENSORLG00000023538	shq1	99	64.322	Oryzias_latipes
ENSACLG00000023077	shq1	99	62.821	ENSORLG00020003697	shq1	99	65.042	Oryzias_latipes_hni
ENSACLG00000023077	shq1	99	61.661	ENSORLG00015021040	shq1	99	63.987	Oryzias_latipes_hsok
ENSACLG00000023077	shq1	92	68.000	ENSOMEG00000001225	shq1	97	67.304	Oryzias_melastigma
ENSACLG00000023077	shq1	79	53.725	ENSOGAG00000003898	SHQ1	78	59.688	Otolemur_garnettii
ENSACLG00000023077	shq1	69	57.528	ENSOARG00000009547	SHQ1	75	60.455	Ovis_aries
ENSACLG00000023077	shq1	79	39.258	ENSPPAG00000043263	-	73	42.989	Pan_paniscus
ENSACLG00000023077	shq1	65	61.631	ENSPPAG00000027714	SHQ1	76	60.762	Pan_paniscus
ENSACLG00000023077	shq1	91	50.761	ENSPPRG00000004769	SHQ1	76	60.360	Panthera_pardus
ENSACLG00000023077	shq1	91	48.294	ENSPTIG00000011478	SHQ1	75	57.078	Panthera_tigris_altaica
ENSACLG00000023077	shq1	65	61.631	ENSPTRG00000015106	SHQ1	76	60.762	Pan_troglodytes
ENSACLG00000023077	shq1	79	38.356	ENSPTRG00000048303	-	73	41.935	Pan_troglodytes
ENSACLG00000023077	shq1	69	57.079	ENSPANG00000002881	SHQ1	76	61.211	Papio_anubis
ENSACLG00000023077	shq1	99	53.566	ENSPKIG00000021517	shq1	75	67.898	Paramormyrops_kingsleyae
ENSACLG00000023077	shq1	70	58.520	ENSPSIG00000005536	SHQ1	72	59.729	Pelodiscus_sinensis
ENSACLG00000023077	shq1	99	57.987	ENSPMGG00000008838	shq1	100	60.469	Periophthalmus_magnuspinnatus
ENSACLG00000023077	shq1	62	60.750	ENSPEMG00000000251	Shq1	76	58.581	Peromyscus_maniculatus_bairdii
ENSACLG00000023077	shq1	73	54.894	ENSPMAG00000005372	shq1	99	57.370	Petromyzon_marinus
ENSACLG00000023077	shq1	92	64.555	ENSPFOG00000003118	shq1	99	68.525	Poecilia_formosa
ENSACLG00000023077	shq1	78	62.880	ENSPMEG00000011076	shq1	98	66.995	Poecilia_mexicana
ENSACLG00000023077	shq1	84	63.465	ENSPREG00000000591	shq1	92	67.197	Poecilia_reticulata
ENSACLG00000023077	shq1	76	57.113	ENSPPYG00000013717	SHQ1	76	60.538	Pongo_abelii
ENSACLG00000023077	shq1	70	57.238	ENSPCAG00000009035	SHQ1	77	60.538	Procavia_capensis
ENSACLG00000023077	shq1	65	61.631	ENSPCOG00000008415	SHQ1	76	60.762	Propithecus_coquereli
ENSACLG00000023077	shq1	77	54.545	ENSPVAG00000017392	SHQ1	77	60.225	Pteropus_vampyrus
ENSACLG00000023077	shq1	96	99.003	ENSPNYG00000003878	shq1	100	99.003	Pundamilia_nyererei
ENSACLG00000023077	shq1	98	54.460	ENSPNAG00000026840	shq1	99	56.726	Pygocentrus_nattereri
ENSACLG00000023077	shq1	74	55.765	ENSRNOG00000005433	Shq1	73	58.652	Rattus_norvegicus
ENSACLG00000023077	shq1	80	52.039	ENSRBIG00000026280	SHQ1	76	59.226	Rhinopithecus_bieti
ENSACLG00000023077	shq1	80	53.728	ENSRROG00000034126	SHQ1	77	61.435	Rhinopithecus_roxellana
ENSACLG00000023077	shq1	69	51.011	ENSSBOG00000021038	SHQ1	74	53.933	Saimiri_boliviensis_boliviensis
ENSACLG00000023077	shq1	72	56.531	ENSSHAG00000015077	SHQ1	77	60.045	Sarcophilus_harrisii
ENSACLG00000023077	shq1	99	56.640	ENSSFOG00015016241	shq1	99	59.564	Scleropages_formosus
ENSACLG00000023077	shq1	99	71.044	ENSSMAG00000016151	shq1	99	73.964	Scophthalmus_maximus
ENSACLG00000023077	shq1	99	72.283	ENSSDUG00000011986	shq1	99	76.073	Seriola_dumerili
ENSACLG00000023077	shq1	99	71.451	ENSSLDG00000013908	shq1	99	75.041	Seriola_lalandi_dorsalis
ENSACLG00000023077	shq1	54	58.309	ENSSARG00000007119	SHQ1	77	50.452	Sorex_araneus
ENSACLG00000023077	shq1	86	45.359	ENSSPUG00000011526	-	65	59.259	Sphenodon_punctatus
ENSACLG00000023077	shq1	82	53.626	ENSSSCG00000011518	SHQ1	75	60.641	Sus_scrofa
ENSACLG00000023077	shq1	65	62.619	ENSTGUG00000009933	SHQ1	76	61.883	Taeniopygia_guttata
ENSACLG00000023077	shq1	98	62.279	ENSTRUG00000009446	shq1	99	66.162	Takifugu_rubripes
ENSACLG00000023077	shq1	74	69.658	ENSTNIG00000007354	shq1	96	72.936	Tetraodon_nigroviridis
ENSACLG00000023077	shq1	73	55.932	ENSTTRG00000005320	SHQ1	76	59.685	Tursiops_truncatus
ENSACLG00000023077	shq1	94	48.020	ENSUMAG00000024031	SHQ1	74	60.047	Ursus_maritimus
ENSACLG00000023077	shq1	71	46.753	ENSVPAG00000004880	SHQ1	59	60.635	Vicugna_pacos
ENSACLG00000023077	shq1	62	60.150	ENSVVUG00000013906	SHQ1	76	59.551	Vulpes_vulpes
ENSACLG00000023077	shq1	99	45.975	ENSXETG00000032215	shq1	99	48.706	Xenopus_tropicalis