EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000023333 (Gene tree)
Gene ID: 113022500
Gene Symbol: thumpd3
Alias: cb255|sb:cb255|zgc:163086
Full Name: THUMP domain containing 3
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 12100 bases
Position: chr5:20480438-20492537
Accession: 113022500
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000034433	THUMP	PF02926.17	5e-10	1	1
ENSACLP00000034454	THUMP	PF02926.17	5e-10	1	1
ENSACLP00000034433	UPF0020	PF01170.18	8.7e-41	1	1
ENSACLP00000034454	UPF0020	PF01170.18	8.7e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000035274	-	3046	-	ENSACLP00000034454	495 (aa)	XP_026023748	UPI000329C1B0
ENSACLT00000035253	-	3389	-	ENSACLP00000034433	495 (aa)	XP_026023748	UPI000329C1B0

Gene Model

Click here to download ENSACLG00000023333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000023333's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000023333	thumpd3	82	70.443	ENSACLG00000013504	-	86	70.443

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000023333	thumpd3	90	59.698	ENSG00000134077	THUMPD3	92	59.698	Homo_sapiens
ENSACLG00000023333	thumpd3	97	87.344	ENSAPOG00000015836	thumpd3	99	87.164	Acanthochromis_polyacanthus
ENSACLG00000023333	thumpd3	91	58.386	ENSAMEG00000011321	THUMPD3	93	59.023	Ailuropoda_melanoleuca
ENSACLG00000023333	thumpd3	99	92.121	ENSACIG00000020096	thumpd3	99	92.323	Amphilophus_citrinellus
ENSACLG00000023333	thumpd3	100	85.685	ENSAOCG00000004399	thumpd3	100	85.685	Amphiprion_ocellaris
ENSACLG00000023333	thumpd3	100	86.290	ENSAPEG00000016740	thumpd3	100	86.290	Amphiprion_percula
ENSACLG00000023333	thumpd3	99	84.082	ENSATEG00000005345	thumpd3	99	84.082	Anabas_testudineus
ENSACLG00000023333	thumpd3	76	62.595	ENSAPLG00000003598	THUMPD3	99	62.500	Anas_platyrhynchos
ENSACLG00000023333	thumpd3	89	60.619	ENSACAG00000014974	THUMPD3	92	60.331	Anolis_carolinensis
ENSACLG00000023333	thumpd3	90	57.759	ENSANAG00000002365	THUMPD3	92	58.836	Aotus_nancymaae
ENSACLG00000023333	thumpd3	93	71.888	ENSAMXG00000015683	thumpd3	98	71.888	Astyanax_mexicanus
ENSACLG00000023333	thumpd3	89	60.435	ENSBTAG00000003112	THUMPD3	91	62.338	Bos_taurus
ENSACLG00000023333	thumpd3	85	34.988	WBGene00010846	M04B2.2	96	35.225	Caenorhabditis_elegans
ENSACLG00000023333	thumpd3	91	56.716	ENSCJAG00000015949	THUMPD3	92	58.621	Callithrix_jacchus
ENSACLG00000023333	thumpd3	73	58.225	ENSCAFG00000008060	-	93	59.055	Canis_familiaris
ENSACLG00000023333	thumpd3	91	58.898	ENSCAFG00000005499	THUMPD3	93	59.574	Canis_familiaris
ENSACLG00000023333	thumpd3	78	59.314	ENSCAFG00020025887	-	94	60.099	Canis_lupus_dingo
ENSACLG00000023333	thumpd3	91	58.898	ENSCAFG00020008895	-	93	59.574	Canis_lupus_dingo
ENSACLG00000023333	thumpd3	88	60.784	ENSCHIG00000024037	THUMPD3	90	61.674	Capra_hircus
ENSACLG00000023333	thumpd3	90	57.759	ENSTSYG00000000159	THUMPD3	92	58.887	Carlito_syrichta
ENSACLG00000023333	thumpd3	84	41.943	ENSCAPG00000017486	THUMPD3	84	42.654	Cavia_aperea
ENSACLG00000023333	thumpd3	90	60.215	ENSCPOG00000033287	THUMPD3	94	59.329	Cavia_porcellus
ENSACLG00000023333	thumpd3	90	51.410	ENSCCAG00000021429	-	94	52.863	Cebus_capucinus
ENSACLG00000023333	thumpd3	90	57.759	ENSCCAG00000027067	-	92	59.267	Cebus_capucinus
ENSACLG00000023333	thumpd3	91	57.356	ENSCATG00000040999	THUMPD3	92	59.267	Cercocebus_atys
ENSACLG00000023333	thumpd3	89	59.825	ENSCLAG00000000690	THUMPD3	91	60.699	Chinchilla_lanigera
ENSACLG00000023333	thumpd3	91	57.356	ENSCSAG00000010753	THUMPD3	93	58.849	Chlorocebus_sabaeus
ENSACLG00000023333	thumpd3	75	49.027	ENSCHOG00000012851	THUMPD3	75	49.027	Choloepus_hoffmanni
ENSACLG00000023333	thumpd3	90	60.879	ENSCPBG00000014771	THUMPD3	94	60.879	Chrysemys_picta_bellii
ENSACLG00000023333	thumpd3	88	40.183	ENSCSAVG00000008668	-	97	39.310	Ciona_savignyi
ENSACLG00000023333	thumpd3	91	57.143	ENSCANG00000031901	THUMPD3	93	58.635	Colobus_angolensis_palliatus
ENSACLG00000023333	thumpd3	88	61.148	ENSCGRG00001024117	Thumpd3	90	61.148	Cricetulus_griseus_chok1gshd
ENSACLG00000023333	thumpd3	88	61.148	ENSCGRG00000018116	Thumpd3	90	61.148	Cricetulus_griseus_crigri
ENSACLG00000023333	thumpd3	93	81.075	ENSCSEG00000002546	thumpd3	99	77.621	Cynoglossus_semilaevis
ENSACLG00000023333	thumpd3	100	79.317	ENSCVAG00000001019	thumpd3	99	79.518	Cyprinodon_variegatus
ENSACLG00000023333	thumpd3	93	67.021	ENSDARG00000059634	thumpd3	99	67.021	Danio_rerio
ENSACLG00000023333	thumpd3	93	58.091	ENSDNOG00000047668	THUMPD3	92	59.583	Dasypus_novemcinctus
ENSACLG00000023333	thumpd3	90	58.887	ENSDORG00000003257	Thumpd3	93	60.043	Dipodomys_ordii
ENSACLG00000023333	thumpd3	58	54.369	ENSETEG00000020239	-	60	55.700	Echinops_telfairi
ENSACLG00000023333	thumpd3	86	52.392	ENSEBUG00000004221	thumpd3	97	52.392	Eptatretus_burgeri
ENSACLG00000023333	thumpd3	87	59.912	ENSEASG00005013327	THUMPD3	90	60.841	Equus_asinus_asinus
ENSACLG00000023333	thumpd3	87	61.674	ENSECAG00000002016	THUMPD3	90	62.611	Equus_caballus
ENSACLG00000023333	thumpd3	93	53.222	ENSEEUG00000014696	THUMPD3	97	52.988	Erinaceus_europaeus
ENSACLG00000023333	thumpd3	79	88.087	ENSELUG00000018246	thumpd3	69	88.087	Esox_lucius
ENSACLG00000023333	thumpd3	91	58.635	ENSFCAG00000006171	THUMPD3	92	60.128	Felis_catus
ENSACLG00000023333	thumpd3	83	58.904	ENSFALG00000013631	THUMPD3	91	58.904	Ficedula_albicollis
ENSACLG00000023333	thumpd3	88	61.758	ENSFDAG00000014825	THUMPD3	90	61.758	Fukomys_damarensis
ENSACLG00000023333	thumpd3	99	82.365	ENSFHEG00000006006	thumpd3	99	82.365	Fundulus_heteroclitus
ENSACLG00000023333	thumpd3	97	69.710	ENSGMOG00000007923	thumpd3	98	69.710	Gadus_morhua
ENSACLG00000023333	thumpd3	92	56.707	ENSGALG00000044813	THUMPD3	97	57.114	Gallus_gallus
ENSACLG00000023333	thumpd3	58	31.164	ENSGALG00000009119	THUMPD2	65	31.164	Gallus_gallus
ENSACLG00000023333	thumpd3	99	81.928	ENSGAFG00000021645	thumpd3	99	81.928	Gambusia_affinis
ENSACLG00000023333	thumpd3	99	79.268	ENSGACG00000000930	thumpd3	99	81.760	Gasterosteus_aculeatus
ENSACLG00000023333	thumpd3	87	61.720	ENSGAGG00000022750	THUMPD3	91	62.338	Gopherus_agassizii
ENSACLG00000023333	thumpd3	90	59.914	ENSGGOG00000000604	THUMPD3	92	59.914	Gorilla_gorilla
ENSACLG00000023333	thumpd3	100	99.596	ENSHBUG00000013405	thumpd3	100	99.596	Haplochromis_burtoni
ENSACLG00000023333	thumpd3	89	59.259	ENSHGLG00000016200	THUMPD3	91	59.695	Heterocephalus_glaber_female
ENSACLG00000023333	thumpd3	87	53.468	ENSHGLG00100000505	-	92	53.468	Heterocephalus_glaber_male
ENSACLG00000023333	thumpd3	89	59.477	ENSHGLG00100017321	-	91	59.913	Heterocephalus_glaber_male
ENSACLG00000023333	thumpd3	95	77.378	ENSHCOG00000004871	thumpd3	99	77.848	Hippocampus_comes
ENSACLG00000023333	thumpd3	91	71.648	ENSIPUG00000019415	THUMPD3	94	71.648	Ictalurus_punctatus
ENSACLG00000023333	thumpd3	91	58.936	ENSSTOG00000003973	THUMPD3	93	59.701	Ictidomys_tridecemlineatus
ENSACLG00000023333	thumpd3	94	52.869	ENSJJAG00000017751	Thumpd3	95	53.689	Jaculus_jaculus
ENSACLG00000023333	thumpd3	99	81.174	ENSKMAG00000021025	thumpd3	94	81.174	Kryptolebias_marmoratus
ENSACLG00000023333	thumpd3	99	84.444	ENSLBEG00000012252	thumpd3	99	84.444	Labrus_bergylta
ENSACLG00000023333	thumpd3	88	60.776	ENSLACG00000018604	THUMPD3	90	60.385	Latimeria_chalumnae
ENSACLG00000023333	thumpd3	91	63.618	ENSLOCG00000009800	thumpd3	95	66.452	Lepisosteus_oculatus
ENSACLG00000023333	thumpd3	90	60.086	ENSLAFG00000005103	THUMPD3	92	61.803	Loxodonta_africana
ENSACLG00000023333	thumpd3	90	57.759	ENSMFAG00000044884	THUMPD3	92	59.267	Macaca_fascicularis
ENSACLG00000023333	thumpd3	90	57.759	ENSMMUG00000017307	THUMPD3	92	59.267	Macaca_mulatta
ENSACLG00000023333	thumpd3	90	57.759	ENSMNEG00000030529	THUMPD3	92	59.267	Macaca_nemestrina
ENSACLG00000023333	thumpd3	91	57.962	ENSMLEG00000032943	THUMPD3	92	59.267	Mandrillus_leucophaeus
ENSACLG00000023333	thumpd3	95	83.795	ENSMAMG00000023934	thumpd3	100	81.653	Mastacembelus_armatus
ENSACLG00000023333	thumpd3	100	100.000	ENSMZEG00005010623	thumpd3	100	100.000	Maylandia_zebra
ENSACLG00000023333	thumpd3	77	59.500	ENSMGAG00000010182	THUMPD3	100	60.891	Meleagris_gallopavo
ENSACLG00000023333	thumpd3	88	60.793	ENSMAUG00000012250	Thumpd3	90	62.198	Mesocricetus_auratus
ENSACLG00000023333	thumpd3	89	56.118	ENSMICG00000010095	THUMPD3	91	57.143	Microcebus_murinus
ENSACLG00000023333	thumpd3	88	62.031	ENSMOCG00000020148	Thumpd3	90	62.031	Microtus_ochrogaster
ENSACLG00000023333	thumpd3	99	79.513	ENSMMOG00000021791	thumpd3	99	82.942	Mola_mola
ENSACLG00000023333	thumpd3	91	58.403	ENSMODG00000004715	-	93	58.193	Monodelphis_domestica
ENSACLG00000023333	thumpd3	95	84.222	ENSMALG00000017316	thumpd3	99	84.222	Monopterus_albus
ENSACLG00000023333	thumpd3	53	53.571	MGP_CAROLIEiJ_G0028714	-	58	54.286	Mus_caroli
ENSACLG00000023333	thumpd3	90	59.315	ENSMUSG00000030264	Thumpd3	92	60.000	Mus_musculus
ENSACLG00000023333	thumpd3	90	60.944	MGP_PahariEiJ_G0022465	Thumpd3	92	60.730	Mus_pahari
ENSACLG00000023333	thumpd3	90	59.529	MGP_SPRETEiJ_G0029742	Thumpd3	92	60.215	Mus_spretus
ENSACLG00000023333	thumpd3	88	54.746	ENSMPUG00000005219	-	90	55.629	Mustela_putorius_furo
ENSACLG00000023333	thumpd3	88	60.088	ENSMPUG00000017066	-	90	60.746	Mustela_putorius_furo
ENSACLG00000023333	thumpd3	90	58.511	ENSMLUG00000008538	THUMPD3	91	58.974	Myotis_lucifugus
ENSACLG00000023333	thumpd3	89	59.348	ENSNGAG00000021014	-	91	60.435	Nannospalax_galili
ENSACLG00000023333	thumpd3	88	49.774	ENSNGAG00000001549	-	89	50.226	Nannospalax_galili
ENSACLG00000023333	thumpd3	100	98.788	ENSNBRG00000004886	thumpd3	100	98.788	Neolamprologus_brichardi
ENSACLG00000023333	thumpd3	91	59.275	ENSNLEG00000003863	THUMPD3	92	59.698	Nomascus_leucogenys
ENSACLG00000023333	thumpd3	80	59.179	ENSMEUG00000009819	THUMPD3	98	58.937	Notamacropus_eugenii
ENSACLG00000023333	thumpd3	79	59.124	ENSOPRG00000002020	THUMPD3	98	59.854	Ochotona_princeps
ENSACLG00000023333	thumpd3	68	56.497	ENSODEG00000018242	THUMPD3	100	57.910	Octodon_degus
ENSACLG00000023333	thumpd3	100	96.566	ENSONIG00000018977	thumpd3	100	96.566	Oreochromis_niloticus
ENSACLG00000023333	thumpd3	79	56.039	ENSOANG00000014481	THUMPD3	97	55.819	Ornithorhynchus_anatinus
ENSACLG00000023333	thumpd3	91	59.494	ENSOCUG00000010921	THUMPD3	93	60.549	Oryctolagus_cuniculus
ENSACLG00000023333	thumpd3	97	78.794	ENSORLG00000000676	thumpd3	99	78.794	Oryzias_latipes
ENSACLG00000023333	thumpd3	97	79.210	ENSORLG00020007509	thumpd3	99	79.210	Oryzias_latipes_hni
ENSACLG00000023333	thumpd3	97	79.418	ENSORLG00015003615	thumpd3	99	79.418	Oryzias_latipes_hsok
ENSACLG00000023333	thumpd3	98	77.686	ENSOMEG00000014115	thumpd3	98	77.479	Oryzias_melastigma
ENSACLG00000023333	thumpd3	78	57.635	ENSOGAG00000017111	THUMPD3	99	58.374	Otolemur_garnettii
ENSACLG00000023333	thumpd3	88	60.784	ENSOARG00000007139	THUMPD3	88	62.500	Ovis_aries
ENSACLG00000023333	thumpd3	90	59.698	ENSPPAG00000025852	THUMPD3	92	59.698	Pan_paniscus
ENSACLG00000023333	thumpd3	91	58.824	ENSPPRG00000008071	THUMPD3	92	60.600	Panthera_pardus
ENSACLG00000023333	thumpd3	88	60.173	ENSPTIG00000017923	THUMPD3	90	61.538	Panthera_tigris_altaica
ENSACLG00000023333	thumpd3	90	59.483	ENSPTRG00000014585	THUMPD3	92	59.483	Pan_troglodytes
ENSACLG00000023333	thumpd3	90	57.328	ENSPANG00000016253	THUMPD3	92	58.836	Papio_anubis
ENSACLG00000023333	thumpd3	91	68.017	ENSPKIG00000014009	thumpd3	94	68.240	Paramormyrops_kingsleyae
ENSACLG00000023333	thumpd3	87	60.480	ENSPSIG00000007370	THUMPD3	90	60.699	Pelodiscus_sinensis
ENSACLG00000023333	thumpd3	92	78.556	ENSPMGG00000017563	thumpd3	96	78.556	Periophthalmus_magnuspinnatus
ENSACLG00000023333	thumpd3	88	60.486	ENSPEMG00000022411	Thumpd3	90	60.486	Peromyscus_maniculatus_bairdii
ENSACLG00000023333	thumpd3	88	54.402	ENSPMAG00000001291	thumpd3	99	54.402	Petromyzon_marinus
ENSACLG00000023333	thumpd3	93	57.438	ENSPCIG00000002049	THUMPD3	95	57.231	Phascolarctos_cinereus
ENSACLG00000023333	thumpd3	99	81.891	ENSPFOG00000002318	thumpd3	99	81.891	Poecilia_formosa
ENSACLG00000023333	thumpd3	99	81.891	ENSPLAG00000014804	thumpd3	99	81.891	Poecilia_latipinna
ENSACLG00000023333	thumpd3	99	81.891	ENSPMEG00000000582	thumpd3	99	81.891	Poecilia_mexicana
ENSACLG00000023333	thumpd3	99	81.800	ENSPREG00000009176	thumpd3	99	81.800	Poecilia_reticulata
ENSACLG00000023333	thumpd3	91	59.062	ENSPPYG00000029461	THUMPD3	92	59.483	Pongo_abelii
ENSACLG00000023333	thumpd3	88	44.118	ENSPPYG00000017616	-	91	43.584	Pongo_abelii
ENSACLG00000023333	thumpd3	80	59.712	ENSPCAG00000015398	THUMPD3	99	59.712	Procavia_capensis
ENSACLG00000023333	thumpd3	90	50.000	ENSPCOG00000018095	-	92	52.802	Propithecus_coquereli
ENSACLG00000023333	thumpd3	80	53.511	ENSPCOG00000023618	-	94	54.237	Propithecus_coquereli
ENSACLG00000023333	thumpd3	89	60.566	ENSPVAG00000008721	THUMPD3	91	60.566	Pteropus_vampyrus
ENSACLG00000023333	thumpd3	100	100.000	ENSPNYG00000006918	thumpd3	100	100.000	Pundamilia_nyererei
ENSACLG00000023333	thumpd3	96	70.332	ENSPNAG00000014936	thumpd3	99	70.332	Pygocentrus_nattereri
ENSACLG00000023333	thumpd3	88	61.184	ENSRNOG00000006941	Thumpd3	90	61.002	Rattus_norvegicus
ENSACLG00000023333	thumpd3	91	57.447	ENSRBIG00000035954	THUMPD3	94	58.936	Rhinopithecus_bieti
ENSACLG00000023333	thumpd3	91	57.234	ENSRROG00000035734	THUMPD3	94	58.723	Rhinopithecus_roxellana
ENSACLG00000023333	thumpd3	91	57.479	ENSSBOG00000023567	THUMPD3	94	59.649	Saimiri_boliviensis_boliviensis
ENSACLG00000023333	thumpd3	90	59.072	ENSSHAG00000014467	THUMPD3	93	59.534	Sarcophilus_harrisii
ENSACLG00000023333	thumpd3	93	71.092	ENSSFOG00015019210	thumpd3	95	71.092	Scleropages_formosus
ENSACLG00000023333	thumpd3	99	83.773	ENSSMAG00000000609	thumpd3	97	85.806	Scophthalmus_maximus
ENSACLG00000023333	thumpd3	100	84.677	ENSSDUG00000012179	thumpd3	99	87.158	Seriola_dumerili
ENSACLG00000023333	thumpd3	100	84.677	ENSSLDG00000022028	thumpd3	100	84.677	Seriola_lalandi_dorsalis
ENSACLG00000023333	thumpd3	80	68.182	ENSSARG00000002239	THUMPD3	82	68.182	Sorex_araneus
ENSACLG00000023333	thumpd3	88	59.488	ENSSPUG00000017461	THUMPD3	92	59.488	Sphenodon_punctatus
ENSACLG00000023333	thumpd3	99	86.640	ENSSPAG00000008345	thumpd3	98	86.640	Stegastes_partitus
ENSACLG00000023333	thumpd3	88	61.220	ENSSSCG00000011542	THUMPD3	90	62.335	Sus_scrofa
ENSACLG00000023333	thumpd3	86	59.688	ENSTGUG00000010440	THUMPD3	100	60.626	Taeniopygia_guttata
ENSACLG00000023333	thumpd3	97	71.518	ENSTRUG00000004420	thumpd3	99	71.518	Takifugu_rubripes
ENSACLG00000023333	thumpd3	93	80.303	ENSTNIG00000014627	thumpd3	99	80.303	Tetraodon_nigroviridis
ENSACLG00000023333	thumpd3	92	54.697	ENSTBEG00000003450	THUMPD3	94	54.927	Tupaia_belangeri
ENSACLG00000023333	thumpd3	91	60.470	ENSTTRG00000009694	THUMPD3	92	60.256	Tursiops_truncatus
ENSACLG00000023333	thumpd3	88	60.088	ENSUAMG00000009412	THUMPD3	90	60.746	Ursus_americanus
ENSACLG00000023333	thumpd3	88	62.929	ENSUMAG00000019241	THUMPD3	90	62.471	Ursus_maritimus
ENSACLG00000023333	thumpd3	73	56.693	ENSVPAG00000002855	THUMPD3	91	58.268	Vicugna_pacos
ENSACLG00000023333	thumpd3	91	59.110	ENSVVUG00000025278	THUMPD3	93	59.787	Vulpes_vulpes
ENSACLG00000023333	thumpd3	93	57.669	ENSXETG00000001447	thumpd3	94	58.714	Xenopus_tropicalis
ENSACLG00000023333	thumpd3	99	81.325	ENSXCOG00000000159	thumpd3	99	83.932	Xiphophorus_couchianus
ENSACLG00000023333	thumpd3	99	81.363	ENSXMAG00000001423	thumpd3	99	81.363	Xiphophorus_maculatus