EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000023474 (Gene tree)
Gene ID: 113010246
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC113010246
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 1665 bases
Position: chr18:2765589-2767253
Accession: 113010246
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000034663	MMR_HSR1	PF01926.23	2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000035486	-	1665	-	ENSACLP00000034663	554 (aa)	XP_026005018	UPI000E3F97BD

Gene Model

Click here to download ENSACLG00000023474's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000023474's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000023474	-	65	36.757	ENSACLG00000015361	-	88	36.216
ENSACLG00000023474	-	58	38.509	ENSACLG00000009330	-	63	38.509
ENSACLG00000023474	-	92	75.781	ENSACLG00000023126	-	96	75.781
ENSACLG00000023474	-	92	35.907	ENSACLG00000009261	-	95	35.907
ENSACLG00000023474	-	69	80.208	ENSACLG00000023033	-	95	81.217
ENSACLG00000023474	-	89	39.938	ENSACLG00000006538	-	88	38.395
ENSACLG00000023474	-	86	36.853	ENSACLG00000010007	-	70	37.267
ENSACLG00000023474	-	85	34.461	ENSACLG00000018599	-	88	34.316
ENSACLG00000023474	-	97	80.663	ENSACLG00000023468	-	93	80.295
ENSACLG00000023474	-	58	39.319	ENSACLG00000006285	-	58	37.249
ENSACLG00000023474	-	86	41.071	ENSACLG00000017259	-	77	40.774
ENSACLG00000023474	-	88	35.010	ENSACLG00000018271	-	87	34.809
ENSACLG00000023474	-	89	34.791	ENSACLG00000021761	-	90	34.592
ENSACLG00000023474	-	91	35.630	ENSACLG00000006543	-	90	34.875
ENSACLG00000023474	-	99	87.748	ENSACLG00000023481	-	99	87.387

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000023474	-	88	64.198	ENSAPOG00000015792	-	86	64.198	Acanthochromis_polyacanthus
ENSACLG00000023474	-	96	61.394	ENSAPOG00000015784	-	88	60.967	Acanthochromis_polyacanthus
ENSACLG00000023474	-	97	77.365	ENSACIG00000009923	-	87	77.551	Amphilophus_citrinellus
ENSACLG00000023474	-	90	80.517	ENSACIG00000022228	-	85	79.920	Amphilophus_citrinellus
ENSACLG00000023474	-	96	69.737	ENSAOCG00000015171	-	50	69.549	Amphiprion_ocellaris
ENSACLG00000023474	-	97	69.533	ENSAPEG00000005793	-	99	69.346	Amphiprion_percula
ENSACLG00000023474	-	99	72.578	ENSATEG00000009097	-	92	72.395	Anabas_testudineus
ENSACLG00000023474	-	97	61.639	ENSCVAG00000018327	-	91	61.639	Cyprinodon_variegatus
ENSACLG00000023474	-	97	60.374	ENSFHEG00000008149	-	82	60.000	Fundulus_heteroclitus
ENSACLG00000023474	-	99	72.645	ENSFHEG00000021969	-	99	72.645	Fundulus_heteroclitus
ENSACLG00000023474	-	96	59.551	ENSFHEG00000011074	-	83	59.176	Fundulus_heteroclitus
ENSACLG00000023474	-	99	97.138	ENSHBUG00000012995	-	99	97.138	Haplochromis_burtoni
ENSACLG00000023474	-	100	84.173	ENSHBUG00000021307	-	100	83.813	Haplochromis_burtoni
ENSACLG00000023474	-	96	73.048	ENSKMAG00000016903	-	72	72.677	Kryptolebias_marmoratus
ENSACLG00000023474	-	96	64.728	ENSKMAG00000016981	-	85	64.728	Kryptolebias_marmoratus
ENSACLG00000023474	-	92	48.155	ENSLACG00000008367	-	99	48.155	Latimeria_chalumnae
ENSACLG00000023474	-	97	73.297	ENSMAMG00000015216	-	97	73.297	Mastacembelus_armatus
ENSACLG00000023474	-	97	72.376	ENSMAMG00000015097	-	97	72.376	Mastacembelus_armatus
ENSACLG00000023474	-	97	74.770	ENSMAMG00000015247	-	97	74.770	Mastacembelus_armatus
ENSACLG00000023474	-	98	83.303	ENSMZEG00005020281	-	91	82.936	Maylandia_zebra
ENSACLG00000023474	-	100	98.195	ENSMZEG00005020274	-	100	98.195	Maylandia_zebra
ENSACLG00000023474	-	91	86.391	ENSNBRG00000022932	-	91	85.996	Neolamprologus_brichardi
ENSACLG00000023474	-	97	82.904	ENSNBRG00000016799	-	95	82.721	Neolamprologus_brichardi
ENSACLG00000023474	-	90	89.820	ENSNBRG00000016760	-	98	89.222	Neolamprologus_brichardi
ENSACLG00000023474	-	87	87.397	ENSONIG00000012363	-	99	86.777	Oreochromis_niloticus
ENSACLG00000023474	-	96	58.209	ENSPKIG00000011996	-	93	57.944	Paramormyrops_kingsleyae
ENSACLG00000023474	-	92	62.524	ENSPKIG00000009271	-	86	61.942	Paramormyrops_kingsleyae
ENSACLG00000023474	-	75	63.934	ENSPMGG00000000605	-	83	63.934	Periophthalmus_magnuspinnatus
ENSACLG00000023474	-	96	71.429	ENSPFOG00000010758	-	83	71.429	Poecilia_formosa
ENSACLG00000023474	-	97	61.495	ENSPLAG00000000406	-	99	61.121	Poecilia_latipinna
ENSACLG00000023474	-	96	70.841	ENSPLAG00000010093	-	70	70.841	Poecilia_latipinna
ENSACLG00000023474	-	92	61.057	ENSPLAG00000005002	-	99	61.057	Poecilia_latipinna
ENSACLG00000023474	-	97	61.682	ENSPMEG00000014712	-	82	61.308	Poecilia_mexicana
ENSACLG00000023474	-	99	59.854	ENSPMEG00000015576	-	51	59.854	Poecilia_mexicana
ENSACLG00000023474	-	93	72.780	ENSPREG00000021204	-	96	72.394	Poecilia_reticulata
ENSACLG00000023474	-	96	72.983	ENSSMAG00000004663	-	87	72.983	Scophthalmus_maximus
ENSACLG00000023474	-	93	76.550	ENSSDUG00000004257	-	93	76.357	Seriola_dumerili
ENSACLG00000023474	-	95	74.857	ENSSLDG00000021625	-	93	74.713	Seriola_lalandi_dorsalis
ENSACLG00000023474	-	96	72.575	ENSSPAG00000003320	-	91	72.575	Stegastes_partitus
ENSACLG00000023474	-	98	60.146	ENSXMAG00000022115	-	50	60.146	Xiphophorus_maculatus
ENSACLG00000023474	-	91	63.618	ENSXMAG00000023457	-	96	63.221	Xiphophorus_maculatus
ENSACLG00000023474	-	97	61.869	ENSXMAG00000022709	-	82	61.495	Xiphophorus_maculatus