EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000023483 (Gene tree)
Gene ID: 113010191
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 16837 bases
Position: chr18:2820992-2837828
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000034677	MMR_HSR1	PF01926.23	4.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000035500	-	7934	-	ENSACLP00000034677	1269 (aa)	-	-

Gene Model

Click here to download ENSACLG00000023483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000023483's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000023483	-	96	68.167	ENSACLG00000022932	-	99	68.167
ENSACLG00000023483	-	100	97.557	ENSACLG00000023475	-	98	97.557
ENSACLG00000023483	-	97	70.056	ENSACLG00000022989	-	99	70.175

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000023483	-	75	70.390	ENSHBUG00000004854	-	99	70.148	Haplochromis_burtoni
ENSACLG00000023483	-	97	75.342	ENSLBEG00000019733	-	98	75.000	Labrus_bergylta
ENSACLG00000023483	-	79	69.017	ENSLBEG00000005517	-	99	69.017	Labrus_bergylta
ENSACLG00000023483	-	98	47.031	ENSLOCG00000014656	-	98	47.167	Lepisosteus_oculatus
ENSACLG00000023483	-	100	98.188	ENSMZEG00005020282	-	100	98.188	Maylandia_zebra
ENSACLG00000023483	-	100	97.951	ENSMZEG00005020277	-	98	97.951	Maylandia_zebra
ENSACLG00000023483	-	99	43.774	ENSSDUG00000003791	-	98	44.205	Seriola_dumerili
ENSACLG00000023483	-	99	44.297	ENSSLDG00000006728	-	97	44.631	Seriola_lalandi_dorsalis
ENSACLG00000023483	-	99	43.975	ENSSLDG00000006974	-	97	44.418	Seriola_lalandi_dorsalis
ENSACLG00000023483	-	91	43.040	ENSSLDG00000000458	-	98	43.307	Seriola_lalandi_dorsalis