EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000023506 (Gene tree)
Gene ID: 113022502
Gene Symbol: rad18
Alias: zgc:55577
Full Name: RAD18%2C E3 ubiquitin protein ligase
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 38881 bases
Position: chr5:20586504-20625384
Accession: 113022502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000034705	SAP	PF02037.27	1.6e-08	1	1
ENSACLP00000034728	SAP	PF02037.27	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000035528	-	1737	-	ENSACLP00000034705	456 (aa)	-	-
ENSACLT00000035551	-	4309	-	ENSACLP00000034728	493 (aa)	XP_026023752	UPI000E423266

Gene Model

Click here to download ENSACLG00000023506's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000023506's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000023506	rad18	82	43.603	ENSG00000070950	RAD18	95	58.140	Homo_sapiens
ENSACLG00000023506	rad18	100	70.717	ENSAPOG00000005260	rad18	97	70.717	Acanthochromis_polyacanthus
ENSACLG00000023506	rad18	81	42.857	ENSAMEG00000012375	RAD18	62	42.857	Ailuropoda_melanoleuca
ENSACLG00000023506	rad18	80	82.432	ENSACIG00000020655	rad18	88	82.432	Amphilophus_citrinellus
ENSACLG00000023506	rad18	100	72.079	ENSAOCG00000004507	rad18	100	72.079	Amphiprion_ocellaris
ENSACLG00000023506	rad18	100	71.485	ENSAPEG00000016837	rad18	100	72.429	Amphiprion_percula
ENSACLG00000023506	rad18	81	42.308	ENSAPLG00000003138	RAD18	75	42.308	Anas_platyrhynchos
ENSACLG00000023506	rad18	82	43.959	ENSANAG00000033360	RAD18	72	43.959	Aotus_nancymaae
ENSACLG00000023506	rad18	98	50.743	ENSAMXG00000002534	rad18	98	52.308	Astyanax_mexicanus
ENSACLG00000023506	rad18	97	38.294	ENSBTAG00000012142	RAD18	82	41.523	Bos_taurus
ENSACLG00000023506	rad18	83	43.797	ENSCJAG00000040303	RAD18	76	44.301	Callithrix_jacchus
ENSACLG00000023506	rad18	82	42.708	ENSCAFG00000005548	RAD18	70	43.299	Canis_familiaris
ENSACLG00000023506	rad18	82	42.708	ENSCAFG00020009228	RAD18	70	43.299	Canis_lupus_dingo
ENSACLG00000023506	rad18	99	37.853	ENSCHIG00000007965	RAD18	94	41.509	Capra_hircus
ENSACLG00000023506	rad18	79	43.360	ENSTSYG00000012189	RAD18	68	43.360	Carlito_syrichta
ENSACLG00000023506	rad18	79	39.037	ENSCAPG00000000356	RAD18	77	39.612	Cavia_aperea
ENSACLG00000023506	rad18	83	42.159	ENSCPOG00000013890	RAD18	73	42.159	Cavia_porcellus
ENSACLG00000023506	rad18	82	43.702	ENSCCAG00000022920	RAD18	72	43.702	Cebus_capucinus
ENSACLG00000023506	rad18	82	43.750	ENSCATG00000039277	RAD18	73	43.750	Cercocebus_atys
ENSACLG00000023506	rad18	84	42.199	ENSCLAG00000003652	RAD18	73	42.199	Chinchilla_lanigera
ENSACLG00000023506	rad18	82	44.010	ENSCSAG00000010783	RAD18	70	44.010	Chlorocebus_sabaeus
ENSACLG00000023506	rad18	90	41.647	ENSCPBG00000014787	RAD18	83	41.667	Chrysemys_picta_bellii
ENSACLG00000023506	rad18	82	44.216	ENSCANG00000007308	RAD18	71	44.216	Colobus_angolensis_palliatus
ENSACLG00000023506	rad18	84	43.860	ENSCGRG00001018154	-	79	43.846	Cricetulus_griseus_chok1gshd
ENSACLG00000023506	rad18	84	43.035	ENSCGRG00001010209	-	74	43.035	Cricetulus_griseus_chok1gshd
ENSACLG00000023506	rad18	84	43.035	ENSCGRG00000019636	-	74	43.035	Cricetulus_griseus_crigri
ENSACLG00000023506	rad18	84	43.860	ENSCGRG00000007283	-	79	43.846	Cricetulus_griseus_crigri
ENSACLG00000023506	rad18	100	61.600	ENSCSEG00000002516	rad18	96	61.600	Cynoglossus_semilaevis
ENSACLG00000023506	rad18	96	52.561	ENSDARG00000027938	rad18	98	52.735	Danio_rerio
ENSACLG00000023506	rad18	58	56.989	ENSDNOG00000040055	RAD18	72	42.893	Dasypus_novemcinctus
ENSACLG00000023506	rad18	82	41.013	ENSDORG00000001099	Rad18	75	42.480	Dipodomys_ordii
ENSACLG00000023506	rad18	69	40.867	ENSETEG00000002268	RAD18	66	40.867	Echinops_telfairi
ENSACLG00000023506	rad18	82	43.959	ENSEASG00005013316	RAD18	66	43.959	Equus_asinus_asinus
ENSACLG00000023506	rad18	82	43.959	ENSECAG00000010746	RAD18	69	43.959	Equus_caballus
ENSACLG00000023506	rad18	100	52.490	ENSELUG00000000733	rad18	100	52.107	Esox_lucius
ENSACLG00000023506	rad18	88	41.766	ENSFCAG00000025747	RAD18	76	42.243	Felis_catus
ENSACLG00000023506	rad18	90	42.143	ENSFALG00000013625	RAD18	89	42.143	Ficedula_albicollis
ENSACLG00000023506	rad18	83	43.223	ENSFDAG00000009907	RAD18	72	43.223	Fukomys_damarensis
ENSACLG00000023506	rad18	83	42.607	ENSGALG00000008368	RAD18	75	42.607	Gallus_gallus
ENSACLG00000023506	rad18	97	64.579	ENSGACG00000000920	rad18	100	65.409	Gasterosteus_aculeatus
ENSACLG00000023506	rad18	84	42.159	ENSGAGG00000005184	RAD18	79	42.159	Gopherus_agassizii
ENSACLG00000023506	rad18	82	43.342	ENSGGOG00000008391	RAD18	71	43.342	Gorilla_gorilla
ENSACLG00000023506	rad18	91	98.444	ENSHBUG00000013322	rad18	100	98.598	Haplochromis_burtoni
ENSACLG00000023506	rad18	70	41.141	ENSHGLG00000009196	-	96	41.141	Heterocephalus_glaber_female
ENSACLG00000023506	rad18	70	41.141	ENSHGLG00100017675	-	96	41.141	Heterocephalus_glaber_male
ENSACLG00000023506	rad18	99	52.203	ENSIPUG00000018681	rad18	99	50.644	Ictalurus_punctatus
ENSACLG00000023506	rad18	69	44.954	ENSSTOG00000004870	-	96	44.713	Ictidomys_tridecemlineatus
ENSACLG00000023506	rad18	83	44.216	ENSJJAG00000001484	Rad18	79	44.216	Jaculus_jaculus
ENSACLG00000023506	rad18	100	67.594	ENSKMAG00000020725	rad18	99	67.594	Kryptolebias_marmoratus
ENSACLG00000023506	rad18	67	44.728	ENSLACG00000018437	RAD18	95	44.762	Latimeria_chalumnae
ENSACLG00000023506	rad18	86	53.769	ENSLOCG00000010629	rad18	97	50.219	Lepisosteus_oculatus
ENSACLG00000023506	rad18	81	43.117	ENSLAFG00000004667	RAD18	72	43.117	Loxodonta_africana
ENSACLG00000023506	rad18	82	44.010	ENSMFAG00000028864	RAD18	71	44.271	Macaca_fascicularis
ENSACLG00000023506	rad18	82	44.010	ENSMMUG00000020013	RAD18	96	43.161	Macaca_mulatta
ENSACLG00000023506	rad18	82	44.010	ENSMNEG00000013464	RAD18	71	44.271	Macaca_nemestrina
ENSACLG00000023506	rad18	82	44.560	ENSMLEG00000014306	RAD18	71	44.560	Mandrillus_leucophaeus
ENSACLG00000023506	rad18	93	66.667	ENSMAMG00000023936	rad18	100	66.667	Mastacembelus_armatus
ENSACLG00000023506	rad18	100	98.986	ENSMZEG00005010577	rad18	93	98.986	Maylandia_zebra
ENSACLG00000023506	rad18	79	42.204	ENSMGAG00000010131	RAD18	72	42.204	Meleagris_gallopavo
ENSACLG00000023506	rad18	82	44.301	ENSMAUG00000020642	Rad18	79	44.301	Mesocricetus_auratus
ENSACLG00000023506	rad18	80	42.857	ENSMICG00000013536	RAD18	70	42.706	Microcebus_murinus
ENSACLG00000023506	rad18	84	44.279	ENSMOCG00000009114	Rad18	79	43.846	Microtus_ochrogaster
ENSACLG00000023506	rad18	79	69.811	ENSMMOG00000021793	rad18	97	69.811	Mola_mola
ENSACLG00000023506	rad18	86	44.390	ENSMODG00000004679	RAD18	73	44.634	Monodelphis_domestica
ENSACLG00000023506	rad18	84	44.030	MGP_CAROLIEiJ_G0028712	Rad18	98	43.363	Mus_caroli
ENSACLG00000023506	rad18	84	44.332	ENSMUSG00000030254	Rad18	98	43.413	Mus_musculus
ENSACLG00000023506	rad18	84	44.140	MGP_PahariEiJ_G0022463	Rad18	98	42.522	Mus_pahari
ENSACLG00000023506	rad18	84	44.389	MGP_SPRETEiJ_G0029740	Rad18	98	43.491	Mus_spretus
ENSACLG00000023506	rad18	82	41.818	ENSMPUG00000017063	RAD18	71	43.846	Mustela_putorius_furo
ENSACLG00000023506	rad18	82	42.674	ENSMLUG00000016494	RAD18	70	44.125	Myotis_lucifugus
ENSACLG00000023506	rad18	79	44.355	ENSNGAG00000012464	Rad18	79	44.355	Nannospalax_galili
ENSACLG00000023506	rad18	80	89.835	ENSNBRG00000004794	rad18	97	89.835	Neolamprologus_brichardi
ENSACLG00000023506	rad18	82	44.271	ENSNLEG00000003789	RAD18	71	44.271	Nomascus_leucogenys
ENSACLG00000023506	rad18	60	44.406	ENSMEUG00000003444	-	61	44.406	Notamacropus_eugenii
ENSACLG00000023506	rad18	81	42.820	ENSOPRG00000013856	RAD18	71	44.947	Ochotona_princeps
ENSACLG00000023506	rad18	69	44.172	ENSODEG00000018158	RAD18	95	44.172	Octodon_degus
ENSACLG00000023506	rad18	98	89.579	ENSONIG00000018979	rad18	98	89.579	Oreochromis_niloticus
ENSACLG00000023506	rad18	82	41.775	ENSOCUG00000000013	RAD18	71	44.125	Oryctolagus_cuniculus
ENSACLG00000023506	rad18	80	65.041	ENSORLG00000029026	rad18	96	65.041	Oryzias_latipes
ENSACLG00000023506	rad18	82	43.669	ENSOGAG00000001410	RAD18	72	43.557	Otolemur_garnettii
ENSACLG00000023506	rad18	53	60.674	ENSOARG00000007445	RAD18	71	42.268	Ovis_aries
ENSACLG00000023506	rad18	82	43.864	ENSPPAG00000035797	RAD18	71	43.864	Pan_paniscus
ENSACLG00000023506	rad18	88	41.646	ENSPPRG00000004021	RAD18	76	42.131	Panthera_pardus
ENSACLG00000023506	rad18	88	41.646	ENSPTIG00000008602	RAD18	76	42.131	Panthera_tigris_altaica
ENSACLG00000023506	rad18	82	43.864	ENSPTRG00000014583	RAD18	71	43.864	Pan_troglodytes
ENSACLG00000023506	rad18	82	44.271	ENSPANG00000008855	RAD18	71	44.271	Papio_anubis
ENSACLG00000023506	rad18	89	41.135	ENSPSIG00000006928	RAD18	78	41.135	Pelodiscus_sinensis
ENSACLG00000023506	rad18	75	60.000	ENSPMGG00000013294	rad18	94	60.000	Periophthalmus_magnuspinnatus
ENSACLG00000023506	rad18	92	42.989	ENSPEMG00000022129	Rad18	79	44.615	Peromyscus_maniculatus_bairdii
ENSACLG00000023506	rad18	87	44.794	ENSPCIG00000024872	RAD18	82	44.794	Phascolarctos_cinereus
ENSACLG00000023506	rad18	80	69.730	ENSPFOG00000002722	rad18	98	69.730	Poecilia_formosa
ENSACLG00000023506	rad18	82	44.271	ENSPPYG00000013688	RAD18	71	44.271	Pongo_abelii
ENSACLG00000023506	rad18	55	43.651	ENSPCAG00000008229	RAD18	59	42.537	Procavia_capensis
ENSACLG00000023506	rad18	83	41.538	ENSPVAG00000012220	RAD18	73	43.333	Pteropus_vampyrus
ENSACLG00000023506	rad18	100	98.986	ENSPNYG00000006815	rad18	100	98.986	Pundamilia_nyererei
ENSACLG00000023506	rad18	98	53.731	ENSPNAG00000016082	rad18	99	53.277	Pygocentrus_nattereri
ENSACLG00000023506	rad18	82	44.584	ENSRNOG00000005907	Rad18	73	45.088	Rattus_norvegicus
ENSACLG00000023506	rad18	82	43.411	ENSRBIG00000044173	RAD18	71	43.411	Rhinopithecus_bieti
ENSACLG00000023506	rad18	82	44.819	ENSRROG00000043948	RAD18	73	44.819	Rhinopithecus_roxellana
ENSACLG00000023506	rad18	83	44.246	ENSSBOG00000008434	-	73	44.246	Saimiri_boliviensis_boliviensis
ENSACLG00000023506	rad18	85	41.584	ENSSHAG00000012472	-	92	41.584	Sarcophilus_harrisii
ENSACLG00000023506	rad18	100	50.980	ENSSFOG00015019264	rad18	100	51.076	Scleropages_formosus
ENSACLG00000023506	rad18	69	43.293	ENSSPUG00000017486	RAD18	97	43.293	Sphenodon_punctatus
ENSACLG00000023506	rad18	99	70.775	ENSSPAG00000007165	rad18	99	71.372	Stegastes_partitus
ENSACLG00000023506	rad18	83	42.386	ENSSSCG00000026158	RAD18	72	43.291	Sus_scrofa
ENSACLG00000023506	rad18	80	44.533	ENSTGUG00000010405	RAD18	78	44.855	Taeniopygia_guttata
ENSACLG00000023506	rad18	80	66.038	ENSTRUG00000003517	rad18	100	66.038	Takifugu_rubripes
ENSACLG00000023506	rad18	83	67.624	ENSTNIG00000014625	rad18	100	67.624	Tetraodon_nigroviridis
ENSACLG00000023506	rad18	83	42.967	ENSTTRG00000005034	RAD18	75	42.432	Tursiops_truncatus
ENSACLG00000023506	rad18	82	43.117	ENSUMAG00000019279	RAD18	71	43.523	Ursus_maritimus
ENSACLG00000023506	rad18	83	38.875	ENSVPAG00000002063	RAD18	78	40.665	Vicugna_pacos
ENSACLG00000023506	rad18	96	37.827	ENSVVUG00000025318	RAD18	74	42.674	Vulpes_vulpes
ENSACLG00000023506	rad18	80	41.489	ENSXETG00000033878	RAD18	94	41.489	Xenopus_tropicalis
ENSACLG00000023506	rad18	80	64.770	ENSXCOG00000020018	rad18	95	64.770	Xiphophorus_couchianus
ENSACLG00000023506	rad18	80	65.312	ENSXMAG00000001516	rad18	95	65.312	Xiphophorus_maculatus