EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000023669 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 2718 bases
Position: chr18:3070414-3073131
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000034953	zf-C2H2	PF00096.26	7.9e-17	1	3
ENSACLP00000034953	zf-C2H2	PF00096.26	7.9e-17	2	3
ENSACLP00000034953	zf-C2H2	PF00096.26	7.9e-17	3	3
ENSACLP00000034951	zf-C2H2	PF00096.26	3.7e-16	1	3
ENSACLP00000034951	zf-C2H2	PF00096.26	3.7e-16	2	3
ENSACLP00000034951	zf-C2H2	PF00096.26	3.7e-16	3	3
ENSACLP00000034953	zf-met	PF12874.7	7.7e-05	1	1
ENSACLP00000034951	zf-met	PF12874.7	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000035779	-	1299	-	ENSACLP00000034953	432 (aa)	-	UPI000329FDC5
ENSACLT00000035777	-	1380	-	ENSACLP00000034951	459 (aa)	-	-

Gene Model

Click here to download ENSACLG00000023669's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000023669's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000023669	-	65	45.378	ENSACLG00000019318	-	97	47.059
ENSACLG00000023669	-	55	39.831	ENSACLG00000005594	ZNF319	80	39.831
ENSACLG00000023669	-	58	44.348	ENSACLG00000016841	-	53	44.348
ENSACLG00000023669	-	51	57.143	ENSACLG00000019424	-	96	51.456
ENSACLG00000023669	-	57	41.053	ENSACLG00000020579	znf319b	84	41.053
ENSACLG00000023669	-	52	49.565	ENSACLG00000024308	-	98	53.913
ENSACLG00000023669	-	71	53.000	ENSACLG00000017487	-	93	53.000
ENSACLG00000023669	-	60	48.718	ENSACLG00000025163	-	93	48.718

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000023669	-	100	99.537	ENSHBUG00000011264	-	100	99.537	Haplochromis_burtoni
ENSACLG00000023669	-	100	99.769	ENSMZEG00005020337	-	100	99.769	Maylandia_zebra
ENSACLG00000023669	-	100	100.000	ENSPNYG00000016409	-	100	100.000	Pundamilia_nyererei