EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000023674 (Gene tree)
Gene ID: 113013239
Gene Symbol: pan2 (1 of many)
Alias: fc27e10|si:dkey-126g1.10|wu:fc27e10
Full Name: poly(A) specific ribonuclease subunit PAN2
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 15417 bases
Position: chr20:8276708-8292124
Accession: 113013239
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000035153	RNase_T	PF00929.24	6.2e-20	1	1
ENSACLP00000035040	RNase_T	PF00929.24	6.2e-20	1	1
ENSACLP00000035084	RNase_T	PF00929.24	6.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000035910	-	6323	-	ENSACLP00000035084	1208 (aa)	XP_026009760	UPI000329A9BB
ENSACLT00000035866	-	6439	-	ENSACLP00000035040	1202 (aa)	-	-
ENSACLT00000035979	-	3588	-	ENSACLP00000035153	1195 (aa)	-	-

Gene Model

Click here to download ENSACLG00000023674's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000023674's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000023674	pan2	99	71.441	ENSACLG00000023821	pan2	99	72.152

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000023674	pan2	100	95.620	ENSAPOG00000022955	pan2	100	95.455	Acanthochromis_polyacanthus
ENSACLG00000023674	pan2	99	75.874	ENSAMEG00000003824	PAN2	100	75.802	Ailuropoda_melanoleuca
ENSACLG00000023674	pan2	99	72.589	ENSACIG00000012858	PAN2	99	72.643	Amphilophus_citrinellus
ENSACLG00000023674	pan2	99	93.178	ENSACIG00000013079	pan2	99	92.429	Amphilophus_citrinellus
ENSACLG00000023674	pan2	100	95.455	ENSAOCG00000022334	pan2	100	95.289	Amphiprion_ocellaris
ENSACLG00000023674	pan2	100	95.620	ENSAPEG00000022760	pan2	100	95.455	Amphiprion_percula
ENSACLG00000023674	pan2	99	95.535	ENSATEG00000024030	pan2	100	95.167	Anabas_testudineus
ENSACLG00000023674	pan2	94	77.337	ENSAPLG00000005195	PAN2	100	77.297	Anas_platyrhynchos
ENSACLG00000023674	pan2	99	77.310	ENSACAG00000007067	PAN2	100	77.310	Anolis_carolinensis
ENSACLG00000023674	pan2	99	75.541	ENSANAG00000036468	PAN2	97	83.152	Aotus_nancymaae
ENSACLG00000023674	pan2	99	87.396	ENSAMXG00000005418	pan2	98	87.323	Astyanax_mexicanus
ENSACLG00000023674	pan2	99	75.707	ENSBTAG00000004376	PAN2	100	75.638	Bos_taurus
ENSACLG00000023674	pan2	81	31.034	WBGene00017951	panl-2	70	40.138	Caenorhabditis_elegans
ENSACLG00000023674	pan2	99	75.374	ENSCJAG00000011141	PAN2	100	75.226	Callithrix_jacchus
ENSACLG00000023674	pan2	99	75.624	ENSCAFG00000000119	PAN2	94	83.880	Canis_familiaris
ENSACLG00000023674	pan2	99	75.436	ENSCAFG00020024865	PAN2	100	74.587	Canis_lupus_dingo
ENSACLG00000023674	pan2	99	75.289	ENSCHIG00000026935	PAN2	100	74.837	Capra_hircus
ENSACLG00000023674	pan2	99	75.124	ENSTSYG00000006927	PAN2	97	82.880	Carlito_syrichta
ENSACLG00000023674	pan2	99	75.537	ENSCPOG00000014918	PAN2	100	75.307	Cavia_porcellus
ENSACLG00000023674	pan2	99	75.541	ENSCCAG00000036637	PAN2	97	82.880	Cebus_capucinus
ENSACLG00000023674	pan2	99	75.374	ENSCATG00000045076	PAN2	97	83.607	Cercocebus_atys
ENSACLG00000023674	pan2	99	75.433	ENSCLAG00000011700	PAN2	100	75.061	Chinchilla_lanigera
ENSACLG00000023674	pan2	99	75.291	ENSCSAG00000005173	PAN2	100	75.062	Chlorocebus_sabaeus
ENSACLG00000023674	pan2	99	77.475	ENSCPBG00000014029	PAN2	100	77.393	Chrysemys_picta_bellii
ENSACLG00000023674	pan2	91	46.864	ENSCSAVG00000003833	-	97	61.224	Ciona_savignyi
ENSACLG00000023674	pan2	99	74.065	ENSCANG00000017798	PAN2	100	73.931	Colobus_angolensis_palliatus
ENSACLG00000023674	pan2	99	76.040	ENSCGRG00001019707	Pan2	100	75.740	Cricetulus_griseus_chok1gshd
ENSACLG00000023674	pan2	99	75.310	ENSCGRG00000009996	Pan2	100	75.020	Cricetulus_griseus_crigri
ENSACLG00000023674	pan2	100	88.678	ENSCSEG00000021529	pan2	100	88.512	Cynoglossus_semilaevis
ENSACLG00000023674	pan2	100	93.223	ENSCVAG00000010197	pan2	100	93.058	Cyprinodon_variegatus
ENSACLG00000023674	pan2	100	86.435	ENSDARG00000074675	pan2	100	86.435	Danio_rerio
ENSACLG00000023674	pan2	99	75.770	ENSDNOG00000010940	PAN2	100	75.763	Dasypus_novemcinctus
ENSACLG00000023674	pan2	98	41.575	FBgn0033352	PAN2	99	41.417	Drosophila_melanogaster
ENSACLG00000023674	pan2	75	84.789	ENSETEG00000012041	PAN2	81	85.549	Echinops_telfairi
ENSACLG00000023674	pan2	99	56.397	ENSEBUG00000002773	pan2	98	56.397	Eptatretus_burgeri
ENSACLG00000023674	pan2	99	75.876	ENSEASG00005005235	PAN2	100	75.307	Equus_asinus_asinus
ENSACLG00000023674	pan2	99	75.874	ENSECAG00000019814	PAN2	100	75.802	Equus_caballus
ENSACLG00000023674	pan2	99	89.147	ENSELUG00000024604	pan2	99	89.064	Esox_lucius
ENSACLG00000023674	pan2	99	75.707	ENSFCAG00000012021	PAN2	100	75.638	Felis_catus
ENSACLG00000023674	pan2	99	77.722	ENSFALG00000000464	PAN2	99	77.318	Ficedula_albicollis
ENSACLG00000023674	pan2	99	75.411	ENSFDAG00000017104	PAN2	100	75.265	Fukomys_damarensis
ENSACLG00000023674	pan2	91	92.325	ENSFHEG00000000157	pan2	97	92.325	Fundulus_heteroclitus
ENSACLG00000023674	pan2	100	87.469	ENSGMOG00000007249	pan2	99	87.116	Gadus_morhua
ENSACLG00000023674	pan2	99	78.055	ENSGALG00000031512	PAN2	100	77.723	Gallus_gallus
ENSACLG00000023674	pan2	100	92.893	ENSGAFG00000000284	pan2	100	92.727	Gambusia_affinis
ENSACLG00000023674	pan2	100	91.934	ENSGACG00000010722	pan2	99	91.934	Gasterosteus_aculeatus
ENSACLG00000023674	pan2	99	77.063	ENSGAGG00000007868	PAN2	100	77.063	Gopherus_agassizii
ENSACLG00000023674	pan2	99	75.374	ENSGGOG00000009115	PAN2	97	83.607	Gorilla_gorilla
ENSACLG00000023674	pan2	100	99.834	ENSHBUG00000005234	pan2	100	99.834	Haplochromis_burtoni
ENSACLG00000023674	pan2	99	75.041	ENSHGLG00000005647	PAN2	99	74.959	Heterocephalus_glaber_female
ENSACLG00000023674	pan2	99	74.793	ENSHGLG00100014057	PAN2	99	74.711	Heterocephalus_glaber_male
ENSACLG00000023674	pan2	100	91.322	ENSHCOG00000007920	pan2	100	90.909	Hippocampus_comes
ENSACLG00000023674	pan2	100	86.921	ENSIPUG00000011065	PAN2	100	86.921	Ictalurus_punctatus
ENSACLG00000023674	pan2	94	75.773	ENSSTOG00000015974	PAN2	100	75.508	Ictidomys_tridecemlineatus
ENSACLG00000023674	pan2	99	75.354	ENSJJAG00000013044	Pan2	98	74.835	Jaculus_jaculus
ENSACLG00000023674	pan2	100	93.967	ENSKMAG00000006192	pan2	100	93.802	Kryptolebias_marmoratus
ENSACLG00000023674	pan2	99	88.358	ENSLBEG00000015763	pan2	97	93.490	Labrus_bergylta
ENSACLG00000023674	pan2	99	71.244	ENSLACG00000018694	PAN2	100	70.921	Latimeria_chalumnae
ENSACLG00000023674	pan2	100	86.315	ENSLOCG00000004333	pan2	99	86.315	Lepisosteus_oculatus
ENSACLG00000023674	pan2	99	73.546	ENSLAFG00000014873	PAN2	100	73.546	Loxodonta_africana
ENSACLG00000023674	pan2	99	75.291	ENSMFAG00000002293	PAN2	97	83.607	Macaca_fascicularis
ENSACLG00000023674	pan2	99	75.291	ENSMMUG00000013482	PAN2	94	83.607	Macaca_mulatta
ENSACLG00000023674	pan2	99	75.374	ENSMNEG00000033264	PAN2	97	83.333	Macaca_nemestrina
ENSACLG00000023674	pan2	99	75.458	ENSMLEG00000037388	PAN2	97	83.607	Mandrillus_leucophaeus
ENSACLG00000023674	pan2	99	94.900	ENSMAMG00000001624	pan2	100	94.541	Mastacembelus_armatus
ENSACLG00000023674	pan2	98	73.333	ENSMZEG00005026472	pan2	99	73.333	Maylandia_zebra
ENSACLG00000023674	pan2	100	100.000	ENSMZEG00005026462	pan2	100	100.000	Maylandia_zebra
ENSACLG00000023674	pan2	97	78.388	ENSMGAG00000001439	PAN2	99	78.276	Meleagris_gallopavo
ENSACLG00000023674	pan2	100	75.700	ENSMAUG00000012602	Pan2	99	75.598	Mesocricetus_auratus
ENSACLG00000023674	pan2	99	75.707	ENSMICG00000017661	PAN2	97	81.593	Microcebus_murinus
ENSACLG00000023674	pan2	99	75.707	ENSMOCG00000007191	Pan2	100	75.411	Microtus_ochrogaster
ENSACLG00000023674	pan2	100	92.417	ENSMMOG00000009313	pan2	98	93.089	Mola_mola
ENSACLG00000023674	pan2	99	94.376	ENSMALG00000013377	pan2	100	94.210	Monopterus_albus
ENSACLG00000023674	pan2	99	75.103	MGP_CAROLIEiJ_G0015930	Pan2	100	74.898	Mus_caroli
ENSACLG00000023674	pan2	99	75.667	ENSMUSG00000005682	Pan2	100	75.535	Mus_musculus
ENSACLG00000023674	pan2	99	75.186	MGP_PahariEiJ_G0031154	Pan2	100	75.061	Mus_pahari
ENSACLG00000023674	pan2	99	75.750	MGP_SPRETEiJ_G0016755	Pan2	100	75.618	Mus_spretus
ENSACLG00000023674	pan2	99	75.874	ENSMPUG00000001383	PAN2	100	75.802	Mustela_putorius_furo
ENSACLG00000023674	pan2	99	75.493	ENSMLUG00000006737	PAN2	100	75.309	Myotis_lucifugus
ENSACLG00000023674	pan2	99	75.707	ENSNGAG00000007930	Pan2	100	75.411	Nannospalax_galili
ENSACLG00000023674	pan2	92	100.000	ENSNBRG00000006585	pan2	99	100.000	Neolamprologus_brichardi
ENSACLG00000023674	pan2	99	71.393	ENSNLEG00000017499	PAN2	97	83.060	Nomascus_leucogenys
ENSACLG00000023674	pan2	99	77.095	ENSMEUG00000010125	PAN2	100	76.936	Notamacropus_eugenii
ENSACLG00000023674	pan2	99	75.103	ENSOPRG00000001468	PAN2	100	75.062	Ochotona_princeps
ENSACLG00000023674	pan2	99	74.878	ENSODEG00000007203	PAN2	100	74.531	Octodon_degus
ENSACLG00000023674	pan2	99	96.275	ENSONIG00000016732	pan2	100	95.748	Oreochromis_niloticus
ENSACLG00000023674	pan2	82	68.363	ENSOANG00000005151	PAN2	99	68.232	Ornithorhynchus_anatinus
ENSACLG00000023674	pan2	99	75.310	ENSOCUG00000007227	PAN2	100	75.143	Oryctolagus_cuniculus
ENSACLG00000023674	pan2	99	92.648	ENSORLG00000015195	pan2	100	92.231	Oryzias_latipes
ENSACLG00000023674	pan2	99	92.565	ENSORLG00020000277	pan2	100	92.149	Oryzias_latipes_hni
ENSACLG00000023674	pan2	99	92.398	ENSORLG00015005193	pan2	100	91.901	Oryzias_latipes_hsok
ENSACLG00000023674	pan2	99	92.398	ENSOMEG00000022087	pan2	100	91.983	Oryzias_melastigma
ENSACLG00000023674	pan2	99	74.752	ENSOGAG00000030620	PAN2	100	74.449	Otolemur_garnettii
ENSACLG00000023674	pan2	99	75.624	ENSOARG00000009379	PAN2	100	75.556	Ovis_aries
ENSACLG00000023674	pan2	99	75.374	ENSPPAG00000001208	PAN2	97	83.607	Pan_paniscus
ENSACLG00000023674	pan2	99	75.624	ENSPPRG00000021586	PAN2	100	75.556	Panthera_pardus
ENSACLG00000023674	pan2	99	72.020	ENSPTIG00000012494	PAN2	100	71.826	Panthera_tigris_altaica
ENSACLG00000023674	pan2	99	75.374	ENSPTRG00000052054	PAN2	97	83.607	Pan_troglodytes
ENSACLG00000023674	pan2	92	76.812	ENSPANG00000018906	PAN2	97	83.607	Papio_anubis
ENSACLG00000023674	pan2	100	87.107	ENSPKIG00000003973	pan2	100	86.921	Paramormyrops_kingsleyae
ENSACLG00000023674	pan2	99	74.217	ENSPSIG00000003267	PAN2	100	74.217	Pelodiscus_sinensis
ENSACLG00000023674	pan2	99	91.253	ENSPMGG00000023186	pan2	100	90.646	Periophthalmus_magnuspinnatus
ENSACLG00000023674	pan2	99	75.289	ENSPEMG00000018505	Pan2	100	74.531	Peromyscus_maniculatus_bairdii
ENSACLG00000023674	pan2	91	67.486	ENSPMAG00000004731	pan2	100	67.213	Petromyzon_marinus
ENSACLG00000023674	pan2	99	77.473	ENSPCIG00000024643	PAN2	100	77.228	Phascolarctos_cinereus
ENSACLG00000023674	pan2	100	93.306	ENSPFOG00000008392	pan2	100	93.140	Poecilia_formosa
ENSACLG00000023674	pan2	100	93.223	ENSPLAG00000009198	pan2	100	93.058	Poecilia_latipinna
ENSACLG00000023674	pan2	100	93.223	ENSPMEG00000001484	pan2	100	93.058	Poecilia_mexicana
ENSACLG00000023674	pan2	100	93.388	ENSPREG00000000900	pan2	100	93.223	Poecilia_reticulata
ENSACLG00000023674	pan2	88	77.504	ENSPPYG00000004656	PAN2	99	77.504	Pongo_abelii
ENSACLG00000023674	pan2	92	77.020	ENSPCAG00000011047	PAN2	99	77.020	Procavia_capensis
ENSACLG00000023674	pan2	99	75.790	ENSPCOG00000018263	PAN2	100	75.556	Propithecus_coquereli
ENSACLG00000023674	pan2	94	73.652	ENSPVAG00000007591	PAN2	94	73.598	Pteropus_vampyrus
ENSACLG00000023674	pan2	100	99.917	ENSPNYG00000002629	pan2	100	99.917	Pundamilia_nyererei
ENSACLG00000023674	pan2	100	88.162	ENSPNAG00000027140	pan2	100	88.162	Pygocentrus_nattereri
ENSACLG00000023674	pan2	99	75.783	ENSRNOG00000032441	Pan2	100	75.700	Rattus_norvegicus
ENSACLG00000023674	pan2	99	75.208	ENSRBIG00000029591	PAN2	97	83.060	Rhinopithecus_bieti
ENSACLG00000023674	pan2	99	75.208	ENSRROG00000041950	PAN2	97	83.060	Rhinopithecus_roxellana
ENSACLG00000023674	pan2	99	75.374	ENSSBOG00000027343	PAN2	97	82.880	Saimiri_boliviensis_boliviensis
ENSACLG00000023674	pan2	92	77.358	ENSSHAG00000000122	PAN2	99	78.754	Sarcophilus_harrisii
ENSACLG00000023674	pan2	100	86.672	ENSSFOG00015017740	pan2	100	86.672	Scleropages_formosus
ENSACLG00000023674	pan2	100	93.069	ENSSMAG00000020901	pan2	100	92.987	Scophthalmus_maximus
ENSACLG00000023674	pan2	100	95.868	ENSSDUG00000001840	pan2	100	95.702	Seriola_dumerili
ENSACLG00000023674	pan2	100	95.537	ENSSLDG00000013866	pan2	100	95.372	Seriola_lalandi_dorsalis
ENSACLG00000023674	pan2	92	76.325	ENSSARG00000013350	PAN2	92	76.325	Sorex_araneus
ENSACLG00000023674	pan2	92	79.354	ENSSPUG00000004270	PAN2	99	79.372	Sphenodon_punctatus
ENSACLG00000023674	pan2	100	95.372	ENSSPAG00000019970	pan2	100	95.207	Stegastes_partitus
ENSACLG00000023674	pan2	99	75.374	ENSSSCG00000000393	PAN2	100	75.309	Sus_scrofa
ENSACLG00000023674	pan2	100	92.975	ENSTRUG00000014260	pan2	100	92.810	Takifugu_rubripes
ENSACLG00000023674	pan2	100	92.727	ENSTNIG00000012537	pan2	99	92.645	Tetraodon_nigroviridis
ENSACLG00000023674	pan2	80	75.269	ENSTTRG00000007150	PAN2	80	75.101	Tursiops_truncatus
ENSACLG00000023674	pan2	99	75.856	ENSUAMG00000026522	PAN2	100	75.658	Ursus_americanus
ENSACLG00000023674	pan2	99	75.145	ENSUMAG00000017020	PAN2	100	74.755	Ursus_maritimus
ENSACLG00000023674	pan2	79	91.133	ENSVPAG00000007309	PAN2	84	91.133	Vicugna_pacos
ENSACLG00000023674	pan2	99	75.624	ENSVVUG00000021878	PAN2	100	75.556	Vulpes_vulpes
ENSACLG00000023674	pan2	99	74.236	ENSXETG00000009434	pan2	100	75.084	Xenopus_tropicalis
ENSACLG00000023674	pan2	99	88.354	ENSXCOG00000014391	pan2	100	87.583	Xiphophorus_couchianus
ENSACLG00000023674	pan2	100	93.306	ENSXMAG00000011661	pan2	100	93.140	Xiphophorus_maculatus