EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000023821 (Gene tree)
Gene ID: 113013736
Gene Symbol: pan2 (1 of many)
Alias: fc27e10|si:dkey-126g1.10|wu:fc27e10
Full Name: poly(A) specific ribonuclease subunit PAN2
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 9125 bases
Position: chr20:8316194-8325318
Accession: ZDB-GENE-030131-3113
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000035376	RNase_T	PF00929.24	6.5e-20	1	1
ENSACLP00000035474	RNase_T	PF00929.24	7e-20	1	1
ENSACLP00000035462	RNase_T	PF00929.24	7.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000036307	-	3393	-	ENSACLP00000035474	1130 (aa)	-	-
ENSACLT00000036206	-	3363	-	ENSACLP00000035376	1120 (aa)	-	-
ENSACLT00000036295	-	3363	-	ENSACLP00000035462	1120 (aa)	-	-

Gene Model

Click here to download ENSACLG00000023821's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000023821's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000023821	pan2	99	72.152	ENSACLG00000023674	pan2	99	71.441

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000023821	pan2	99	71.711	ENSAPOG00000022955	pan2	99	71.711	Acanthochromis_polyacanthus
ENSACLG00000023821	pan2	99	59.932	ENSAMEG00000003824	PAN2	98	60.051	Ailuropoda_melanoleuca
ENSACLG00000023821	pan2	99	71.678	ENSACIG00000013079	pan2	99	71.678	Amphilophus_citrinellus
ENSACLG00000023821	pan2	98	67.598	ENSACIG00000012858	PAN2	98	67.568	Amphilophus_citrinellus
ENSACLG00000023821	pan2	99	71.429	ENSAOCG00000022334	pan2	98	71.622	Amphiprion_ocellaris
ENSACLG00000023821	pan2	99	71.188	ENSAPEG00000022760	pan2	98	71.380	Amphiprion_percula
ENSACLG00000023821	pan2	99	70.752	ENSATEG00000024030	pan2	99	70.946	Anabas_testudineus
ENSACLG00000023821	pan2	94	61.710	ENSAPLG00000005195	PAN2	99	62.590	Anas_platyrhynchos
ENSACLG00000023821	pan2	99	61.597	ENSACAG00000007067	PAN2	99	61.597	Anolis_carolinensis
ENSACLG00000023821	pan2	99	59.915	ENSANAG00000036468	PAN2	99	65.957	Aotus_nancymaae
ENSACLG00000023821	pan2	99	66.356	ENSAMXG00000005418	pan2	97	66.525	Astyanax_mexicanus
ENSACLG00000023821	pan2	99	60.085	ENSBTAG00000004376	PAN2	98	60.169	Bos_taurus
ENSACLG00000023821	pan2	99	59.848	ENSCJAG00000011141	PAN2	98	59.966	Callithrix_jacchus
ENSACLG00000023821	pan2	99	60.068	ENSCAFG00000000119	PAN2	100	64.872	Canis_familiaris
ENSACLG00000023821	pan2	99	59.396	ENSCAFG00020024865	PAN2	98	59.281	Canis_lupus_dingo
ENSACLG00000023821	pan2	99	58.996	ENSCHIG00000026935	PAN2	99	59.079	Capra_hircus
ENSACLG00000023821	pan2	99	59.125	ENSTSYG00000006927	PAN2	99	65.691	Carlito_syrichta
ENSACLG00000023821	pan2	99	59.781	ENSCPOG00000014918	PAN2	98	59.865	Cavia_porcellus
ENSACLG00000023821	pan2	99	60.017	ENSCCAG00000036637	PAN2	99	65.691	Cebus_capucinus
ENSACLG00000023821	pan2	99	60.000	ENSCATG00000045076	PAN2	99	66.043	Cercocebus_atys
ENSACLG00000023821	pan2	99	59.398	ENSCLAG00000011700	PAN2	99	59.482	Chinchilla_lanigera
ENSACLG00000023821	pan2	99	59.713	ENSCSAG00000005173	PAN2	99	59.765	Chlorocebus_sabaeus
ENSACLG00000023821	pan2	99	61.088	ENSCPBG00000014029	PAN2	99	61.815	Chrysemys_picta_bellii
ENSACLG00000023821	pan2	91	40.035	ENSCSAVG00000003833	-	99	46.436	Ciona_savignyi
ENSACLG00000023821	pan2	99	58.530	ENSCANG00000017798	PAN2	98	58.734	Colobus_angolensis_palliatus
ENSACLG00000023821	pan2	99	60.102	ENSCGRG00001019707	Pan2	98	60.102	Cricetulus_griseus_chok1gshd
ENSACLG00000023821	pan2	99	59.393	ENSCGRG00000009996	Pan2	98	59.393	Cricetulus_griseus_crigri
ENSACLG00000023821	pan2	99	68.014	ENSCSEG00000021529	pan2	99	68.014	Cynoglossus_semilaevis
ENSACLG00000023821	pan2	99	70.648	ENSCVAG00000010197	pan2	99	70.008	Cyprinodon_variegatus
ENSACLG00000023821	pan2	99	65.511	ENSDARG00000074675	pan2	98	65.709	Danio_rerio
ENSACLG00000023821	pan2	99	60.187	ENSDNOG00000010940	PAN2	98	60.272	Dasypus_novemcinctus
ENSACLG00000023821	pan2	93	38.119	FBgn0033352	PAN2	95	37.951	Drosophila_melanogaster
ENSACLG00000023821	pan2	72	70.725	ENSETEG00000012041	PAN2	75	70.845	Echinops_telfairi
ENSACLG00000023821	pan2	98	49.606	ENSEBUG00000002773	pan2	98	48.705	Eptatretus_burgeri
ENSACLG00000023821	pan2	99	61.207	ENSEASG00005005235	PAN2	98	61.293	Equus_asinus_asinus
ENSACLG00000023821	pan2	99	60.000	ENSECAG00000019814	PAN2	98	60.085	Equus_caballus
ENSACLG00000023821	pan2	99	68.074	ENSELUG00000024604	pan2	99	67.170	Esox_lucius
ENSACLG00000023821	pan2	99	59.932	ENSFCAG00000012021	PAN2	98	59.966	Felis_catus
ENSACLG00000023821	pan2	98	62.361	ENSFALG00000000464	PAN2	97	61.844	Ficedula_albicollis
ENSACLG00000023821	pan2	99	59.546	ENSFDAG00000017104	PAN2	98	59.630	Fukomys_damarensis
ENSACLG00000023821	pan2	90	67.841	ENSFHEG00000000157	pan2	96	68.471	Fundulus_heteroclitus
ENSACLG00000023821	pan2	99	66.019	ENSGMOG00000007249	pan2	98	66.132	Gadus_morhua
ENSACLG00000023821	pan2	99	62.139	ENSGALG00000031512	PAN2	99	61.985	Gallus_gallus
ENSACLG00000023821	pan2	99	71.124	ENSGAFG00000000284	pan2	99	71.124	Gambusia_affinis
ENSACLG00000023821	pan2	99	69.140	ENSGACG00000010722	pan2	98	69.671	Gasterosteus_aculeatus
ENSACLG00000023821	pan2	99	60.578	ENSGAGG00000007868	PAN2	99	60.555	Gopherus_agassizii
ENSACLG00000023821	pan2	99	59.763	ENSGGOG00000009115	PAN2	99	66.043	Gorilla_gorilla
ENSACLG00000023821	pan2	99	72.227	ENSHBUG00000005234	pan2	98	72.589	Haplochromis_burtoni
ENSACLG00000023821	pan2	99	59.011	ENSHGLG00000005647	PAN2	98	59.095	Heterocephalus_glaber_female
ENSACLG00000023821	pan2	99	59.076	ENSHGLG00100014057	PAN2	98	59.160	Heterocephalus_glaber_male
ENSACLG00000023821	pan2	99	68.919	ENSHCOG00000007920	pan2	98	69.030	Hippocampus_comes
ENSACLG00000023821	pan2	99	66.107	ENSIPUG00000011065	PAN2	99	66.191	Ictalurus_punctatus
ENSACLG00000023821	pan2	93	59.015	ENSSTOG00000015974	PAN2	98	59.015	Ictidomys_tridecemlineatus
ENSACLG00000023821	pan2	99	59.628	ENSJJAG00000013044	Pan2	97	59.444	Jaculus_jaculus
ENSACLG00000023821	pan2	99	70.215	ENSKMAG00000006192	pan2	98	70.355	Kryptolebias_marmoratus
ENSACLG00000023821	pan2	99	67.804	ENSLBEG00000015763	pan2	99	67.804	Labrus_bergylta
ENSACLG00000023821	pan2	99	55.749	ENSLACG00000018694	PAN2	98	55.868	Latimeria_chalumnae
ENSACLG00000023821	pan2	99	65.992	ENSLOCG00000004333	pan2	98	66.020	Lepisosteus_oculatus
ENSACLG00000023821	pan2	99	58.045	ENSLAFG00000014873	PAN2	98	58.130	Loxodonta_africana
ENSACLG00000023821	pan2	99	59.915	ENSMFAG00000002293	PAN2	99	66.043	Macaca_fascicularis
ENSACLG00000023821	pan2	99	59.915	ENSMMUG00000013482	PAN2	98	60.000	Macaca_mulatta
ENSACLG00000023821	pan2	99	60.000	ENSMNEG00000033264	PAN2	99	66.043	Macaca_nemestrina
ENSACLG00000023821	pan2	99	60.000	ENSMLEG00000037388	PAN2	99	66.043	Mandrillus_leucophaeus
ENSACLG00000023821	pan2	99	70.558	ENSMAMG00000001624	pan2	98	70.752	Mastacembelus_armatus
ENSACLG00000023821	pan2	99	97.511	ENSMZEG00005026472	pan2	99	97.511	Maylandia_zebra
ENSACLG00000023821	pan2	99	72.152	ENSMZEG00005026462	pan2	98	73.462	Maylandia_zebra
ENSACLG00000023821	pan2	97	62.165	ENSMGAG00000001439	PAN2	99	63.089	Meleagris_gallopavo
ENSACLG00000023821	pan2	99	59.179	ENSMAUG00000012602	Pan2	98	59.179	Mesocricetus_auratus
ENSACLG00000023821	pan2	99	59.664	ENSMICG00000017661	PAN2	99	64.785	Microcebus_murinus
ENSACLG00000023821	pan2	99	59.983	ENSMOCG00000007191	Pan2	98	60.068	Microtus_ochrogaster
ENSACLG00000023821	pan2	98	70.513	ENSMMOG00000009313	pan2	96	70.513	Mola_mola
ENSACLG00000023821	pan2	99	68.917	ENSMALG00000013377	pan2	99	68.917	Monopterus_albus
ENSACLG00000023821	pan2	99	59.882	MGP_CAROLIEiJ_G0015930	Pan2	98	59.882	Mus_caroli
ENSACLG00000023821	pan2	99	59.966	ENSMUSG00000005682	Pan2	99	59.110	Mus_musculus
ENSACLG00000023821	pan2	99	59.628	MGP_PahariEiJ_G0031154	Pan2	98	59.713	Mus_pahari
ENSACLG00000023821	pan2	99	60.255	MGP_SPRETEiJ_G0016755	Pan2	98	60.255	Mus_spretus
ENSACLG00000023821	pan2	99	60.000	ENSMPUG00000001383	PAN2	98	60.085	Mustela_putorius_furo
ENSACLG00000023821	pan2	99	60.085	ENSMLUG00000006737	PAN2	98	60.085	Myotis_lucifugus
ENSACLG00000023821	pan2	99	59.966	ENSNGAG00000007930	Pan2	98	60.051	Nannospalax_galili
ENSACLG00000023821	pan2	99	60.660	ENSNBRG00000006585	pan2	98	65.388	Neolamprologus_brichardi
ENSACLG00000023821	pan2	99	56.986	ENSNLEG00000017499	PAN2	99	65.508	Nomascus_leucogenys
ENSACLG00000023821	pan2	99	60.627	ENSMEUG00000010125	PAN2	99	60.453	Notamacropus_eugenii
ENSACLG00000023821	pan2	99	59.225	ENSOPRG00000001468	PAN2	98	59.325	Ochotona_princeps
ENSACLG00000023821	pan2	99	59.167	ENSODEG00000007203	PAN2	99	59.250	Octodon_degus
ENSACLG00000023821	pan2	99	72.283	ENSONIG00000016732	pan2	98	72.475	Oreochromis_niloticus
ENSACLG00000023821	pan2	82	55.600	ENSOANG00000005151	PAN2	99	55.200	Ornithorhynchus_anatinus
ENSACLG00000023821	pan2	99	59.646	ENSOCUG00000007227	PAN2	98	59.730	Oryctolagus_cuniculus
ENSACLG00000023821	pan2	99	69.172	ENSORLG00000015195	pan2	98	69.451	Oryzias_latipes
ENSACLG00000023821	pan2	99	69.003	ENSORLG00020000277	pan2	99	68.293	Oryzias_latipes_hni
ENSACLG00000023821	pan2	99	68.834	ENSORLG00015005193	pan2	99	68.209	Oryzias_latipes_hsok
ENSACLG00000023821	pan2	99	69.003	ENSOMEG00000022087	pan2	97	70.207	Oryzias_melastigma
ENSACLG00000023821	pan2	99	59.244	ENSOGAG00000030620	PAN2	98	59.244	Otolemur_garnettii
ENSACLG00000023821	pan2	99	59.848	ENSOARG00000009379	PAN2	98	59.966	Ovis_aries
ENSACLG00000023821	pan2	99	59.831	ENSPPAG00000001208	PAN2	99	66.043	Pan_paniscus
ENSACLG00000023821	pan2	99	59.848	ENSPPRG00000021586	PAN2	98	59.882	Panthera_pardus
ENSACLG00000023821	pan2	99	57.485	ENSPTIG00000012494	PAN2	98	57.521	Panthera_tigris_altaica
ENSACLG00000023821	pan2	99	59.831	ENSPTRG00000052054	PAN2	99	66.043	Pan_troglodytes
ENSACLG00000023821	pan2	93	61.101	ENSPANG00000018906	PAN2	99	66.043	Papio_anubis
ENSACLG00000023821	pan2	99	66.836	ENSPKIG00000003973	pan2	98	66.836	Paramormyrops_kingsleyae
ENSACLG00000023821	pan2	99	59.388	ENSPSIG00000003267	PAN2	99	59.125	Pelodiscus_sinensis
ENSACLG00000023821	pan2	99	71.589	ENSPMGG00000023186	pan2	98	71.589	Periophthalmus_magnuspinnatus
ENSACLG00000023821	pan2	99	59.275	ENSPEMG00000018505	Pan2	98	59.359	Peromyscus_maniculatus_bairdii
ENSACLG00000023821	pan2	91	54.603	ENSPMAG00000004731	pan2	100	54.512	Petromyzon_marinus
ENSACLG00000023821	pan2	99	60.814	ENSPCIG00000024643	PAN2	99	60.639	Phascolarctos_cinereus
ENSACLG00000023821	pan2	99	70.076	ENSPFOG00000008392	pan2	98	70.186	Poecilia_formosa
ENSACLG00000023821	pan2	99	70.386	ENSPLAG00000009198	pan2	98	70.101	Poecilia_latipinna
ENSACLG00000023821	pan2	99	70.744	ENSPMEG00000001484	pan2	99	70.008	Poecilia_mexicana
ENSACLG00000023821	pan2	99	71.318	ENSPREG00000000900	pan2	99	70.755	Poecilia_reticulata
ENSACLG00000023821	pan2	89	65.365	ENSPPYG00000004656	PAN2	96	65.365	Pongo_abelii
ENSACLG00000023821	pan2	92	61.086	ENSPCAG00000011047	PAN2	99	61.176	Procavia_capensis
ENSACLG00000023821	pan2	99	59.916	ENSPCOG00000018263	PAN2	99	59.916	Propithecus_coquereli
ENSACLG00000023821	pan2	93	57.172	ENSPVAG00000007591	PAN2	93	57.172	Pteropus_vampyrus
ENSACLG00000023821	pan2	99	71.441	ENSPNYG00000002629	pan2	99	71.525	Pundamilia_nyererei
ENSACLG00000023821	pan2	99	67.198	ENSPNAG00000027140	pan2	99	67.282	Pygocentrus_nattereri
ENSACLG00000023821	pan2	99	60.119	ENSRNOG00000032441	Pan2	98	60.119	Rattus_norvegicus
ENSACLG00000023821	pan2	99	59.831	ENSRBIG00000029591	PAN2	99	65.508	Rhinopithecus_bieti
ENSACLG00000023821	pan2	99	59.831	ENSRROG00000041950	PAN2	99	65.508	Rhinopithecus_roxellana
ENSACLG00000023821	pan2	99	59.915	ENSSBOG00000027343	PAN2	99	65.691	Saimiri_boliviensis_boliviensis
ENSACLG00000023821	pan2	93	60.842	ENSSHAG00000000122	PAN2	99	62.075	Sarcophilus_harrisii
ENSACLG00000023821	pan2	99	65.880	ENSSFOG00015017740	pan2	98	65.965	Scleropages_formosus
ENSACLG00000023821	pan2	99	71.221	ENSSMAG00000020901	pan2	98	71.246	Scophthalmus_maximus
ENSACLG00000023821	pan2	99	71.188	ENSSDUG00000001840	pan2	98	71.380	Seriola_dumerili
ENSACLG00000023821	pan2	99	71.429	ENSSLDG00000013866	pan2	98	71.622	Seriola_lalandi_dorsalis
ENSACLG00000023821	pan2	92	59.132	ENSSARG00000013350	PAN2	91	59.132	Sorex_araneus
ENSACLG00000023821	pan2	93	63.191	ENSSPUG00000004270	PAN2	99	63.373	Sphenodon_punctatus
ENSACLG00000023821	pan2	99	71.355	ENSSPAG00000019970	pan2	98	71.550	Stegastes_partitus
ENSACLG00000023821	pan2	99	59.480	ENSSSCG00000000393	PAN2	99	59.591	Sus_scrofa
ENSACLG00000023821	pan2	99	69.140	ENSTRUG00000014260	pan2	98	69.140	Takifugu_rubripes
ENSACLG00000023821	pan2	99	69.477	ENSTNIG00000012537	pan2	98	69.477	Tetraodon_nigroviridis
ENSACLG00000023821	pan2	78	63.083	ENSTTRG00000007150	PAN2	77	63.083	Tursiops_truncatus
ENSACLG00000023821	pan2	99	60.549	ENSUAMG00000026522	PAN2	98	60.668	Ursus_americanus
ENSACLG00000023821	pan2	99	59.462	ENSUMAG00000017020	PAN2	98	59.546	Ursus_maritimus
ENSACLG00000023821	pan2	77	80.541	ENSVPAG00000007309	PAN2	83	80.541	Vicugna_pacos
ENSACLG00000023821	pan2	99	59.983	ENSVVUG00000021878	PAN2	99	59.983	Vulpes_vulpes
ENSACLG00000023821	pan2	99	58.679	ENSXETG00000009434	pan2	99	59.897	Xenopus_tropicalis
ENSACLG00000023821	pan2	99	66.497	ENSXCOG00000014391	pan2	99	66.497	Xiphophorus_couchianus
ENSACLG00000023821	pan2	99	69.700	ENSXMAG00000011661	pan2	99	69.700	Xiphophorus_maculatus