EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000024219 (Gene tree)
Gene ID: 113034947
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 96549 bases
Position: chr13:21490064-21586612
Accession: 113034947
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000035761	S1	PF00575.23	3.5e-11	1	1
ENSACLP00000035767	S1	PF00575.23	3.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000036601	-	5038	-	ENSACLP00000035761	1021 (aa)	XP_026045917	UPI000E416096
ENSACLT00000036607	-	4179	-	ENSACLP00000035767	1021 (aa)	XP_026045917	UPI000E416096

Gene Model

Click here to download ENSACLG00000024219's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000024219's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000024219	si:ch211-117n7.8	94	52.615	ENSG00000068784	SRBD1	94	52.905	Homo_sapiens
ENSACLG00000024219	si:ch211-117n7.8	100	84.164	ENSAPOG00000005103	si:ch211-117n7.8	100	84.262	Acanthochromis_polyacanthus
ENSACLG00000024219	si:ch211-117n7.8	94	52.626	ENSAMEG00000005993	SRBD1	99	50.828	Ailuropoda_melanoleuca
ENSACLG00000024219	si:ch211-117n7.8	97	87.790	ENSACIG00000009875	si:ch211-117n7.8	100	86.680	Amphilophus_citrinellus
ENSACLG00000024219	si:ch211-117n7.8	100	82.681	ENSAOCG00000024718	si:ch211-117n7.8	100	82.485	Amphiprion_ocellaris
ENSACLG00000024219	si:ch211-117n7.8	97	82.229	ENSAPEG00000002645	si:ch211-117n7.8	100	82.229	Amphiprion_percula
ENSACLG00000024219	si:ch211-117n7.8	100	81.293	ENSATEG00000010844	si:ch211-117n7.8	100	81.293	Anabas_testudineus
ENSACLG00000024219	si:ch211-117n7.8	94	54.205	ENSAPLG00000006313	SRBD1	100	52.149	Anas_platyrhynchos
ENSACLG00000024219	si:ch211-117n7.8	94	52.210	ENSANAG00000025573	SRBD1	99	50.584	Aotus_nancymaae
ENSACLG00000024219	si:ch211-117n7.8	100	62.607	ENSAMXG00000004294	SRBD1	100	64.120	Astyanax_mexicanus
ENSACLG00000024219	si:ch211-117n7.8	83	57.093	ENSBTAG00000007508	SRBD1	99	49.365	Bos_taurus
ENSACLG00000024219	si:ch211-117n7.8	94	52.303	ENSCJAG00000000727	SRBD1	99	50.194	Callithrix_jacchus
ENSACLG00000024219	si:ch211-117n7.8	94	52.826	ENSCAFG00000002554	SRBD1	99	51.212	Canis_familiaris
ENSACLG00000024219	si:ch211-117n7.8	94	50.412	ENSCAFG00020026284	SRBD1	98	57.311	Canis_lupus_dingo
ENSACLG00000024219	si:ch211-117n7.8	83	57.093	ENSCHIG00000016535	SRBD1	98	50.674	Capra_hircus
ENSACLG00000024219	si:ch211-117n7.8	94	53.360	ENSTSYG00000012797	SRBD1	95	53.265	Carlito_syrichta
ENSACLG00000024219	si:ch211-117n7.8	94	53.161	ENSCPOG00000004773	SRBD1	95	52.960	Cavia_porcellus
ENSACLG00000024219	si:ch211-117n7.8	94	52.205	ENSCCAG00000025589	SRBD1	99	50.583	Cebus_capucinus
ENSACLG00000024219	si:ch211-117n7.8	94	52.821	ENSCATG00000039530	SRBD1	95	53.237	Cercocebus_atys
ENSACLG00000024219	si:ch211-117n7.8	94	53.222	ENSCLAG00000008623	SRBD1	95	52.588	Chinchilla_lanigera
ENSACLG00000024219	si:ch211-117n7.8	94	52.497	ENSCSAG00000013350	SRBD1	95	52.707	Chlorocebus_sabaeus
ENSACLG00000024219	si:ch211-117n7.8	81	74.419	ENSCHOG00000003805	SRBD1	82	74.419	Choloepus_hoffmanni
ENSACLG00000024219	si:ch211-117n7.8	82	58.588	ENSCPBG00000005677	SRBD1	97	52.663	Chrysemys_picta_bellii
ENSACLG00000024219	si:ch211-117n7.8	77	40.025	ENSCING00000005950	-	99	40.025	Ciona_intestinalis
ENSACLG00000024219	si:ch211-117n7.8	77	41.562	ENSCSAVG00000000861	-	99	41.562	Ciona_savignyi
ENSACLG00000024219	si:ch211-117n7.8	94	52.464	ENSCANG00000016307	SRBD1	95	52.752	Colobus_angolensis_palliatus
ENSACLG00000024219	si:ch211-117n7.8	83	56.824	ENSCGRG00001000513	Srbd1	85	56.824	Cricetulus_griseus_chok1gshd
ENSACLG00000024219	si:ch211-117n7.8	83	56.824	ENSCGRG00000002283	Srbd1	85	56.824	Cricetulus_griseus_crigri
ENSACLG00000024219	si:ch211-117n7.8	100	72.390	ENSCSEG00000000856	si:ch211-117n7.8	100	72.390	Cynoglossus_semilaevis
ENSACLG00000024219	si:ch211-117n7.8	91	85.104	ENSCVAG00000020212	si:ch211-117n7.8	99	77.377	Cyprinodon_variegatus
ENSACLG00000024219	si:ch211-117n7.8	83	55.568	ENSDNOG00000018686	SRBD1	84	55.452	Dasypus_novemcinctus
ENSACLG00000024219	si:ch211-117n7.8	99	51.315	ENSDORG00000010468	Srbd1	84	57.720	Dipodomys_ordii
ENSACLG00000024219	si:ch211-117n7.8	77	34.887	FBgn0051156	CG31156	79	35.302	Drosophila_melanogaster
ENSACLG00000024219	si:ch211-117n7.8	84	57.685	ENSETEG00000000739	SRBD1	77	57.532	Echinops_telfairi
ENSACLG00000024219	si:ch211-117n7.8	71	46.768	ENSEBUG00000008902	si:ch211-117n7.8	95	46.768	Eptatretus_burgeri
ENSACLG00000024219	si:ch211-117n7.8	94	50.307	ENSEASG00005003132	SRBD1	98	54.815	Equus_asinus_asinus
ENSACLG00000024219	si:ch211-117n7.8	94	52.147	ENSECAG00000013865	SRBD1	98	50.288	Equus_caballus
ENSACLG00000024219	si:ch211-117n7.8	100	66.541	ENSELUG00000012592	si:ch211-117n7.8	100	65.429	Esox_lucius
ENSACLG00000024219	si:ch211-117n7.8	83	56.860	ENSFCAG00000005101	SRBD1	84	56.577	Felis_catus
ENSACLG00000024219	si:ch211-117n7.8	84	57.907	ENSFALG00000012966	SRBD1	96	53.774	Ficedula_albicollis
ENSACLG00000024219	si:ch211-117n7.8	93	53.403	ENSFDAG00000016670	SRBD1	99	51.542	Fukomys_damarensis
ENSACLG00000024219	si:ch211-117n7.8	100	80.683	ENSFHEG00000019480	si:ch211-117n7.8	100	80.000	Fundulus_heteroclitus
ENSACLG00000024219	si:ch211-117n7.8	82	59.338	ENSGALG00000009990	SRBD1	84	59.220	Gallus_gallus
ENSACLG00000024219	si:ch211-117n7.8	100	78.927	ENSGAFG00000019664	si:ch211-117n7.8	100	78.927	Gambusia_affinis
ENSACLG00000024219	si:ch211-117n7.8	61	84.292	ENSGACG00000010794	si:ch211-117n7.8	100	84.292	Gasterosteus_aculeatus
ENSACLG00000024219	si:ch211-117n7.8	82	59.059	ENSGAGG00000006166	SRBD1	99	58.706	Gopherus_agassizii
ENSACLG00000024219	si:ch211-117n7.8	97	51.632	ENSGGOG00000005910	SRBD1	97	53.161	Gorilla_gorilla
ENSACLG00000024219	si:ch211-117n7.8	97	81.288	ENSHBUG00000013207	si:ch211-117n7.8	100	81.288	Haplochromis_burtoni
ENSACLG00000024219	si:ch211-117n7.8	82	57.515	ENSHGLG00000018153	-	96	52.929	Heterocephalus_glaber_female
ENSACLG00000024219	si:ch211-117n7.8	82	57.515	ENSHGLG00100015183	-	96	52.824	Heterocephalus_glaber_male
ENSACLG00000024219	si:ch211-117n7.8	100	63.796	ENSIPUG00000009661	srbd1	100	63.965	Ictalurus_punctatus
ENSACLG00000024219	si:ch211-117n7.8	94	53.161	ENSSTOG00000005898	SRBD1	85	57.715	Ictidomys_tridecemlineatus
ENSACLG00000024219	si:ch211-117n7.8	99	49.180	ENSJJAG00000022244	Srbd1	100	49.084	Jaculus_jaculus
ENSACLG00000024219	si:ch211-117n7.8	99	81.623	ENSKMAG00000003473	si:ch211-117n7.8	100	80.642	Kryptolebias_marmoratus
ENSACLG00000024219	si:ch211-117n7.8	100	80.803	ENSLBEG00000027518	si:ch211-117n7.8	100	80.118	Labrus_bergylta
ENSACLG00000024219	si:ch211-117n7.8	83	58.275	ENSLACG00000009790	SRBD1	99	58.159	Latimeria_chalumnae
ENSACLG00000024219	si:ch211-117n7.8	92	63.014	ENSLOCG00000016360	si:ch211-117n7.8	99	59.903	Lepisosteus_oculatus
ENSACLG00000024219	si:ch211-117n7.8	94	52.718	ENSMFAG00000042026	SRBD1	95	52.929	Macaca_fascicularis
ENSACLG00000024219	si:ch211-117n7.8	93	52.464	ENSMMUG00000003490	SRBD1	95	52.469	Macaca_mulatta
ENSACLG00000024219	si:ch211-117n7.8	94	51.077	ENSMNEG00000034701	SRBD1	95	51.285	Macaca_nemestrina
ENSACLG00000024219	si:ch211-117n7.8	94	52.615	ENSMLEG00000000745	SRBD1	95	53.032	Mandrillus_leucophaeus
ENSACLG00000024219	si:ch211-117n7.8	100	80.901	ENSMAMG00000021921	si:ch211-117n7.8	100	81.391	Mastacembelus_armatus
ENSACLG00000024219	si:ch211-117n7.8	100	99.804	ENSMZEG00005027369	si:ch211-117n7.8	100	99.804	Maylandia_zebra
ENSACLG00000024219	si:ch211-117n7.8	78	56.950	ENSMGAG00000010273	SRBD1	99	56.950	Meleagris_gallopavo
ENSACLG00000024219	si:ch211-117n7.8	77	55.596	ENSMAUG00000013916	Srbd1	95	55.596	Mesocricetus_auratus
ENSACLG00000024219	si:ch211-117n7.8	94	52.863	ENSMICG00000007835	SRBD1	99	51.250	Microcebus_murinus
ENSACLG00000024219	si:ch211-117n7.8	83	56.471	ENSMOCG00000018716	Srbd1	85	56.706	Microtus_ochrogaster
ENSACLG00000024219	si:ch211-117n7.8	97	77.980	ENSMMOG00000007507	si:ch211-117n7.8	100	77.980	Mola_mola
ENSACLG00000024219	si:ch211-117n7.8	100	81.348	ENSMALG00000001562	si:ch211-117n7.8	100	81.641	Monopterus_albus
ENSACLG00000024219	si:ch211-117n7.8	92	52.610	MGP_CAROLIEiJ_G0021934	Srbd1	99	58.882	Mus_caroli
ENSACLG00000024219	si:ch211-117n7.8	92	52.401	ENSMUSG00000024135	Srbd1	96	56.343	Mus_musculus
ENSACLG00000024219	si:ch211-117n7.8	92	52.033	MGP_PahariEiJ_G0020924	Srbd1	96	52.033	Mus_pahari
ENSACLG00000024219	si:ch211-117n7.8	92	52.401	MGP_SPRETEiJ_G0022850	Srbd1	96	52.401	Mus_spretus
ENSACLG00000024219	si:ch211-117n7.8	93	53.455	ENSMLUG00000007039	SRBD1	95	53.163	Myotis_lucifugus
ENSACLG00000024219	si:ch211-117n7.8	99	49.481	ENSNGAG00000011893	Srbd1	99	49.252	Nannospalax_galili
ENSACLG00000024219	si:ch211-117n7.8	98	92.008	ENSNBRG00000012873	si:ch211-117n7.8	100	92.008	Neolamprologus_brichardi
ENSACLG00000024219	si:ch211-117n7.8	94	52.405	ENSNLEG00000016877	SRBD1	94	52.692	Nomascus_leucogenys
ENSACLG00000024219	si:ch211-117n7.8	94	52.445	ENSODEG00000012095	SRBD1	85	56.243	Octodon_degus
ENSACLG00000024219	si:ch211-117n7.8	100	98.433	ENSONIG00000000945	si:ch211-117n7.8	100	98.433	Oreochromis_niloticus
ENSACLG00000024219	si:ch211-117n7.8	92	53.086	ENSOCUG00000015385	SRBD1	99	51.600	Oryctolagus_cuniculus
ENSACLG00000024219	si:ch211-117n7.8	100	74.634	ENSORLG00000004427	si:ch211-117n7.8	100	73.659	Oryzias_latipes
ENSACLG00000024219	si:ch211-117n7.8	100	77.507	ENSORLG00020012792	si:ch211-117n7.8	100	76.534	Oryzias_latipes_hni
ENSACLG00000024219	si:ch211-117n7.8	100	77.290	ENSORLG00015018598	si:ch211-117n7.8	100	76.413	Oryzias_latipes_hsok
ENSACLG00000024219	si:ch211-117n7.8	95	81.061	ENSOMEG00000012229	si:ch211-117n7.8	99	81.061	Oryzias_melastigma
ENSACLG00000024219	si:ch211-117n7.8	98	50.147	ENSOGAG00000001076	SRBD1	96	50.924	Otolemur_garnettii
ENSACLG00000024219	si:ch211-117n7.8	83	53.184	ENSOARG00000005958	SRBD1	99	47.623	Ovis_aries
ENSACLG00000024219	si:ch211-117n7.8	94	52.508	ENSPPAG00000038442	SRBD1	99	50.532	Pan_paniscus
ENSACLG00000024219	si:ch211-117n7.8	83	57.159	ENSPPRG00000003449	SRBD1	84	57.043	Panthera_pardus
ENSACLG00000024219	si:ch211-117n7.8	83	57.159	ENSPTIG00000012495	SRBD1	84	57.043	Panthera_tigris_altaica
ENSACLG00000024219	si:ch211-117n7.8	94	52.508	ENSPTRG00000011889	SRBD1	99	50.532	Pan_troglodytes
ENSACLG00000024219	si:ch211-117n7.8	94	52.513	ENSPANG00000008063	SRBD1	95	52.675	Papio_anubis
ENSACLG00000024219	si:ch211-117n7.8	99	61.456	ENSPKIG00000021973	si:ch211-117n7.8	99	60.773	Paramormyrops_kingsleyae
ENSACLG00000024219	si:ch211-117n7.8	82	58.353	ENSPSIG00000008992	SRBD1	100	51.007	Pelodiscus_sinensis
ENSACLG00000024219	si:ch211-117n7.8	98	73.626	ENSPMGG00000013348	si:ch211-117n7.8	99	73.926	Periophthalmus_magnuspinnatus
ENSACLG00000024219	si:ch211-117n7.8	82	55.208	ENSPEMG00000020684	Srbd1	84	55.208	Peromyscus_maniculatus_bairdii
ENSACLG00000024219	si:ch211-117n7.8	100	79.512	ENSPFOG00000010650	si:ch211-117n7.8	100	79.512	Poecilia_formosa
ENSACLG00000024219	si:ch211-117n7.8	100	79.610	ENSPLAG00000002141	si:ch211-117n7.8	100	79.610	Poecilia_latipinna
ENSACLG00000024219	si:ch211-117n7.8	100	79.610	ENSPMEG00000018537	si:ch211-117n7.8	100	79.610	Poecilia_mexicana
ENSACLG00000024219	si:ch211-117n7.8	100	77.637	ENSPREG00000003258	si:ch211-117n7.8	100	77.637	Poecilia_reticulata
ENSACLG00000024219	si:ch211-117n7.8	94	49.179	ENSPPYG00000012444	SRBD1	98	47.161	Pongo_abelii
ENSACLG00000024219	si:ch211-117n7.8	74	52.094	ENSPCAG00000005629	SRBD1	80	51.832	Procavia_capensis
ENSACLG00000024219	si:ch211-117n7.8	94	44.670	ENSPCOG00000017669	SRBD1	99	43.292	Propithecus_coquereli
ENSACLG00000024219	si:ch211-117n7.8	88	47.983	ENSPVAG00000001782	SRBD1	100	44.732	Pteropus_vampyrus
ENSACLG00000024219	si:ch211-117n7.8	97	90.232	ENSPNYG00000000508	si:ch211-117n7.8	100	90.232	Pundamilia_nyererei
ENSACLG00000024219	si:ch211-117n7.8	94	66.667	ENSPNAG00000013492	SRBD1	97	65.365	Pygocentrus_nattereri
ENSACLG00000024219	si:ch211-117n7.8	82	56.532	ENSRNOG00000014720	Srbd1	83	56.532	Rattus_norvegicus
ENSACLG00000024219	si:ch211-117n7.8	94	52.513	ENSRBIG00000033486	SRBD1	96	52.724	Rhinopithecus_bieti
ENSACLG00000024219	si:ch211-117n7.8	94	52.513	ENSRROG00000041599	SRBD1	96	52.724	Rhinopithecus_roxellana
ENSACLG00000024219	si:ch211-117n7.8	94	52.312	ENSSBOG00000024982	SRBD1	99	50.437	Saimiri_boliviensis_boliviensis
ENSACLG00000024219	si:ch211-117n7.8	85	66.552	ENSSFOG00015001128	si:ch211-117n7.8	94	66.438	Scleropages_formosus
ENSACLG00000024219	si:ch211-117n7.8	100	80.957	ENSSMAG00000018256	si:ch211-117n7.8	100	80.957	Scophthalmus_maximus
ENSACLG00000024219	si:ch211-117n7.8	97	83.597	ENSSLDG00000023189	si:ch211-117n7.8	100	83.597	Seriola_lalandi_dorsalis
ENSACLG00000024219	si:ch211-117n7.8	94	49.485	ENSSARG00000009740	SRBD1	96	49.009	Sorex_araneus
ENSACLG00000024219	si:ch211-117n7.8	83	58.968	ENSSPUG00000010475	SRBD1	94	58.754	Sphenodon_punctatus
ENSACLG00000024219	si:ch211-117n7.8	97	77.778	ENSSPAG00000008092	-	100	78.705	Stegastes_partitus
ENSACLG00000024219	si:ch211-117n7.8	94	53.019	ENSSSCG00000008445	SRBD1	98	50.575	Sus_scrofa
ENSACLG00000024219	si:ch211-117n7.8	82	58.893	ENSTGUG00000003878	SRBD1	100	58.824	Taeniopygia_guttata
ENSACLG00000024219	si:ch211-117n7.8	99	76.047	ENSTRUG00000007080	si:ch211-117n7.8	98	81.440	Takifugu_rubripes
ENSACLG00000024219	si:ch211-117n7.8	98	74.263	ENSTNIG00000007464	si:ch211-117n7.8	98	73.772	Tetraodon_nigroviridis
ENSACLG00000024219	si:ch211-117n7.8	66	80.851	ENSTBEG00000004556	SRBD1	64	80.851	Tupaia_belangeri
ENSACLG00000024219	si:ch211-117n7.8	88	53.810	ENSTTRG00000011871	SRBD1	91	57.065	Tursiops_truncatus
ENSACLG00000024219	si:ch211-117n7.8	94	52.766	ENSUAMG00000008126	SRBD1	97	54.513	Ursus_americanus
ENSACLG00000024219	si:ch211-117n7.8	94	52.766	ENSUMAG00000012902	SRBD1	97	51.163	Ursus_maritimus
ENSACLG00000024219	si:ch211-117n7.8	83	56.461	ENSVPAG00000006825	SRBD1	93	55.749	Vicugna_pacos
ENSACLG00000024219	si:ch211-117n7.8	94	52.984	ENSVVUG00000005389	SRBD1	99	49.070	Vulpes_vulpes
ENSACLG00000024219	si:ch211-117n7.8	98	45.429	ENSXETG00000002760	srbd1	98	45.146	Xenopus_tropicalis
ENSACLG00000024219	si:ch211-117n7.8	100	79.610	ENSXMAG00000016861	si:ch211-117n7.8	100	79.610	Xiphophorus_maculatus