EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000024227 (Gene tree)
Gene ID: 113016670
Gene Symbol: arl13b
Alias: arl2l1|chunp6872|dkfzp761h079|fc23g07|scorpion|un-named hi459|unm hi459|wu:fc23g07|zgc:123149
Full Name: ADP-ribosylation factor-like 13b
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 11904 bases
Position: chr23:28297801-28309704
Accession: ZDB-GENE-021217-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000035780	MMR_HSR1	PF01926.23	8.2e-06	1	1
ENSACLP00000035777	MMR_HSR1	PF01926.23	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000036620	-	1335	-	ENSACLP00000035780	235 (aa)	-	-
ENSACLT00000036617	-	1176	-	ENSACLP00000035777	391 (aa)	-	-

Gene Model

Click here to download ENSACLG00000024227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000024227's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000024227	arl13b	75	31.073	ENSACLG00000008835	arl3l2	90	31.073
ENSACLG00000024227	arl13b	64	33.775	ENSACLG00000005011	-	75	33.775
ENSACLG00000024227	arl13b	73	32.749	ENSACLG00000027139	arl3	90	32.948
ENSACLG00000024227	arl13b	65	32.911	ENSACLG00000014218	arl4cb	81	32.911
ENSACLG00000024227	arl13b	71	33.140	ENSACLG00000020245	-	87	33.333
ENSACLG00000024227	arl13b	73	31.792	ENSACLG00000008188	arl1	90	31.792
ENSACLG00000024227	arl13b	69	31.902	ENSACLG00000011996	arl8a	87	33.333
ENSACLG00000024227	arl13b	71	30.539	ENSACLG00000019945	arl5a	88	30.539
ENSACLG00000024227	arl13b	63	35.065	ENSACLG00000024991	arl4d	76	35.065
ENSACLG00000024227	arl13b	90	44.340	ENSACLG00000000738	arl13a	55	47.465
ENSACLG00000024227	arl13b	71	32.738	ENSACLG00000006072	-	88	32.738
ENSACLG00000024227	arl13b	73	31.395	ENSACLG00000004123	-	91	31.395
ENSACLG00000024227	arl13b	66	36.709	ENSACLG00000015415	-	75	36.709
ENSACLG00000024227	arl13b	74	33.889	ENSACLG00000011811	-	83	34.659
ENSACLG00000024227	arl13b	71	32.738	ENSACLG00000024971	arf3b	88	32.738
ENSACLG00000024227	arl13b	67	33.742	ENSACLG00000026984	arl14	78	33.951
ENSACLG00000024227	arl13b	59	34.286	ENSACLG00000022869	-	87	34.286
ENSACLG00000024227	arl13b	72	30.588	ENSACLG00000000922	arl5c	89	32.886
ENSACLG00000024227	arl13b	74	31.461	ENSACLG00000024656	ARL6	94	31.694
ENSACLG00000024227	arl13b	74	31.492	ENSACLG00000016659	-	92	30.208
ENSACLG00000024227	arl13b	69	31.902	ENSACLG00000013597	arl8ba	87	33.333
ENSACLG00000024227	arl13b	70	36.364	ENSACLG00000009822	-	86	36.364
ENSACLG00000024227	arl13b	77	30.769	ENSACLG00000025604	-	96	30.769
ENSACLG00000024227	arl13b	74	38.728	ENSACLG00000021338	arl2	93	38.333
ENSACLG00000024227	arl13b	75	31.638	ENSACLG00000012519	-	93	31.667
ENSACLG00000024227	arl13b	71	32.143	ENSACLG00000022124	arf2b	88	32.143
ENSACLG00000024227	arl13b	64	30.667	ENSACLG00000014649	sar1b	74	30.667
ENSACLG00000024227	arl13b	60	32.624	ENSACLG00000013053	sar1ab	75	31.788
ENSACLG00000024227	arl13b	77	32.044	ENSACLG00000017387	-	96	32.044
ENSACLG00000024227	arl13b	72	31.285	ENSACLG00000002442	arfrp1	86	31.285
ENSACLG00000024227	arl13b	71	33.533	ENSACLG00000021872	arl8bb	88	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000024227	arl13b	90	97.630	ENSAPOG00000013256	arl13b	99	82.396	Acanthochromis_polyacanthus
ENSACLG00000024227	arl13b	90	99.052	ENSACIG00000017582	arl13b	95	99.130	Amphilophus_citrinellus
ENSACLG00000024227	arl13b	90	97.630	ENSAOCG00000002828	arl13b	99	82.396	Amphiprion_ocellaris
ENSACLG00000024227	arl13b	90	97.630	ENSAPEG00000014654	arl13b	99	77.136	Amphiprion_percula
ENSACLG00000024227	arl13b	90	98.104	ENSATEG00000017586	arl13b	97	78.117	Anabas_testudineus
ENSACLG00000024227	arl13b	95	74.439	ENSACAG00000000523	ARL13B	99	60.671	Anolis_carolinensis
ENSACLG00000024227	arl13b	90	90.995	ENSAMXG00000042824	arl13b	100	73.171	Astyanax_mexicanus
ENSACLG00000024227	arl13b	87	81.863	ENSCAPG00000006764	ARL13B	94	58.311	Cavia_aperea
ENSACLG00000024227	arl13b	89	80.095	ENSCPOG00000002558	ARL13B	99	60.000	Cavia_porcellus
ENSACLG00000024227	arl13b	89	81.429	ENSCLAG00000006379	ARL13B	71	81.218	Chinchilla_lanigera
ENSACLG00000024227	arl13b	96	75.221	ENSCPBG00000005599	ARL13B	100	61.432	Chrysemys_picta_bellii
ENSACLG00000024227	arl13b	91	95.794	ENSCSEG00000005258	arl13b	99	76.284	Cynoglossus_semilaevis
ENSACLG00000024227	arl13b	86	93.069	ENSCVAG00000001545	arl13b	86	94.009	Cyprinodon_variegatus
ENSACLG00000024227	arl13b	86	91.584	ENSDARG00000012763	arl13b	83	92.627	Danio_rerio
ENSACLG00000024227	arl13b	91	56.744	ENSEBUG00000006528	arl13b	91	48.327	Eptatretus_burgeri
ENSACLG00000024227	arl13b	95	78.125	ENSEEUG00000010823	ARL13B	73	75.000	Erinaceus_europaeus
ENSACLG00000024227	arl13b	86	76.119	ENSFALG00000001654	ARL13B	99	56.468	Ficedula_albicollis
ENSACLG00000024227	arl13b	90	79.621	ENSFDAG00000006556	ARL13B	100	60.417	Fukomys_damarensis
ENSACLG00000024227	arl13b	86	92.079	ENSFHEG00000016049	arl13b	99	77.807	Fundulus_heteroclitus
ENSACLG00000024227	arl13b	88	88.835	ENSGMOG00000018628	arl13b	100	71.237	Gadus_morhua
ENSACLG00000024227	arl13b	89	94.762	ENSGAFG00000000025	arl13b	99	81.454	Gambusia_affinis
ENSACLG00000024227	arl13b	98	87.013	ENSGACG00000014228	arl13b	99	78.025	Gasterosteus_aculeatus
ENSACLG00000024227	arl13b	97	74.672	ENSGAGG00000019336	ARL13B	100	61.343	Gopherus_agassizii
ENSACLG00000024227	arl13b	100	100.000	ENSHBUG00000020619	arl13b	100	100.000	Haplochromis_burtoni
ENSACLG00000024227	arl13b	86	95.050	ENSHCOG00000006106	arl13b	99	77.836	Hippocampus_comes
ENSACLG00000024227	arl13b	91	96.279	ENSKMAG00000001122	arl13b	99	81.638	Kryptolebias_marmoratus
ENSACLG00000024227	arl13b	96	88.053	ENSLBEG00000014612	arl13b	99	78.240	Labrus_bergylta
ENSACLG00000024227	arl13b	91	83.955	ENSLOCG00000010465	arl13b	82	83.955	Lepisosteus_oculatus
ENSACLG00000024227	arl13b	96	91.111	ENSMAMG00000021452	arl13b	99	82.195	Mastacembelus_armatus
ENSACLG00000024227	arl13b	100	99.744	ENSMZEG00005017827	arl13b	100	99.744	Maylandia_zebra
ENSACLG00000024227	arl13b	99	84.359	ENSMMOG00000010253	arl13b	99	84.359	Mola_mola
ENSACLG00000024227	arl13b	91	96.279	ENSMALG00000014655	arl13b	99	79.540	Monopterus_albus
ENSACLG00000024227	arl13b	87	80.488	MGP_CAROLIEiJ_G0020856	Arl13b	100	61.072	Mus_caroli
ENSACLG00000024227	arl13b	87	80.488	ENSMUSG00000022911	Arl13b	100	60.930	Mus_musculus
ENSACLG00000024227	arl13b	87	80.488	MGP_PahariEiJ_G0016561	Arl13b	100	57.674	Mus_pahari
ENSACLG00000024227	arl13b	87	80.488	MGP_SPRETEiJ_G0021763	Arl13b	100	60.698	Mus_spretus
ENSACLG00000024227	arl13b	88	80.193	ENSMLUG00000017473	ARL13B	96	58.637	Myotis_lucifugus
ENSACLG00000024227	arl13b	100	94.629	ENSNBRG00000004078	arl13b	100	94.629	Neolamprologus_brichardi
ENSACLG00000024227	arl13b	99	72.103	ENSNLEG00000001772	ARL13B	100	59.535	Nomascus_leucogenys
ENSACLG00000024227	arl13b	89	70.000	ENSMEUG00000008036	-	81	65.323	Notamacropus_eugenii
ENSACLG00000024227	arl13b	99	75.431	ENSODEG00000011381	ARL13B	100	59.302	Octodon_degus
ENSACLG00000024227	arl13b	90	100.000	ENSONIG00000001864	arl13b	100	82.609	Oreochromis_niloticus
ENSACLG00000024227	arl13b	86	95.050	ENSORLG00000006350	arl13b	91	96.522	Oryzias_latipes
ENSACLG00000024227	arl13b	86	95.050	ENSORLG00020013754	arl13b	99	79.653	Oryzias_latipes_hni
ENSACLG00000024227	arl13b	92	88.940	ENSORLG00015012586	arl13b	99	79.901	Oryzias_latipes_hsok
ENSACLG00000024227	arl13b	86	89.604	ENSOMEG00000010187	arl13b	84	91.244	Oryzias_melastigma
ENSACLG00000024227	arl13b	90	81.991	ENSPSIG00000018115	ARL13B	99	62.162	Pelodiscus_sinensis
ENSACLG00000024227	arl13b	86	94.554	ENSPMGG00000004584	arl13b	99	80.597	Periophthalmus_magnuspinnatus
ENSACLG00000024227	arl13b	97	60.088	ENSPCIG00000026984	ARL13B	95	45.433	Phascolarctos_cinereus
ENSACLG00000024227	arl13b	100	81.546	ENSPFOG00000005379	arl13b	100	81.546	Poecilia_formosa
ENSACLG00000024227	arl13b	84	93.939	ENSPLAG00000008699	arl13b	99	81.117	Poecilia_latipinna
ENSACLG00000024227	arl13b	85	93.970	ENSPMEG00000015387	arl13b	99	80.990	Poecilia_mexicana
ENSACLG00000024227	arl13b	100	81.000	ENSPREG00000006291	arl13b	100	82.250	Poecilia_reticulata
ENSACLG00000024227	arl13b	95	97.849	ENSPNYG00000022879	arl13b	98	97.849	Pundamilia_nyererei
ENSACLG00000024227	arl13b	86	92.574	ENSPNAG00000003803	arl13b	100	74.878	Pygocentrus_nattereri
ENSACLG00000024227	arl13b	83	74.112	ENSSFOG00015023057	arl13b	85	72.222	Scleropages_formosus
ENSACLG00000024227	arl13b	91	84.475	ENSSFOG00015005491	arl13b	84	85.185	Scleropages_formosus
ENSACLG00000024227	arl13b	99	79.082	ENSSMAG00000015450	arl13b	99	79.082	Scophthalmus_maximus
ENSACLG00000024227	arl13b	91	97.209	ENSSDUG00000005560	arl13b	96	80.000	Seriola_dumerili
ENSACLG00000024227	arl13b	98	92.208	ENSSLDG00000013361	arl13b	99	79.897	Seriola_lalandi_dorsalis
ENSACLG00000024227	arl13b	90	78.673	ENSSARG00000003872	ARL13B	99	58.879	Sorex_araneus
ENSACLG00000024227	arl13b	91	80.465	ENSSPUG00000006649	ARL13B	88	81.106	Sphenodon_punctatus
ENSACLG00000024227	arl13b	90	98.104	ENSSPAG00000016442	arl13b	91	81.472	Stegastes_partitus
ENSACLG00000024227	arl13b	99	72.103	ENSTGUG00000013493	ARL13B	100	55.035	Taeniopygia_guttata
ENSACLG00000024227	arl13b	92	70.776	ENSTRUG00000013035	-	84	70.507	Takifugu_rubripes
ENSACLG00000024227	arl13b	89	72.249	ENSTRUG00000003641	arl13b	74	70.918	Takifugu_rubripes
ENSACLG00000024227	arl13b	90	78.199	ENSVVUG00000021511	ARL13B	100	56.410	Vulpes_vulpes
ENSACLG00000024227	arl13b	83	40.909	ENSXETG00000026166	arl13a	50	40.845	Xenopus_tropicalis
ENSACLG00000024227	arl13b	98	76.623	ENSXETG00000032383	ARL13B	97	76.580	Xenopus_tropicalis
ENSACLG00000024227	arl13b	100	83.163	ENSXCOG00000016955	arl13b	100	83.163	Xiphophorus_couchianus
ENSACLG00000024227	arl13b	99	81.360	ENSXMAG00000002089	arl13b	99	81.360	Xiphophorus_maculatus