EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000024373 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 3519 bases
Position: chr5:32782183-32785701
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000035990	RRM_1	PF00076.22	4.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000036840	-	288	-	ENSACLP00000035990	95 (aa)	-	-

Gene Model

Click here to download ENSACLG00000024373's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000024373's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000024373	-	80	78.947	ENSACLG00000003395	srsf4	60	78.082

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000024373	-	96	79.570	ENSG00000124193	SRSF6	54	89.041	Homo_sapiens
ENSACLG00000024373	-	91	97.674	ENSACIG00000020091	-	82	97.619	Amphilophus_citrinellus
ENSACLG00000024373	-	80	92.105	ENSAOCG00000019438	-	64	91.781	Amphiprion_ocellaris
ENSACLG00000024373	-	96	79.570	ENSANAG00000024080	SRSF6	54	89.041	Aotus_nancymaae
ENSACLG00000024373	-	77	94.521	ENSAMXG00000042692	-	52	94.521	Astyanax_mexicanus
ENSACLG00000024373	-	96	80.645	ENSBTAG00000008527	SRSF6	54	90.411	Bos_taurus
ENSACLG00000024373	-	96	79.570	ENSCJAG00000048403	SRSF6	54	89.041	Callithrix_jacchus
ENSACLG00000024373	-	96	80.645	ENSCAFG00000009289	SRSF6	54	90.411	Canis_familiaris
ENSACLG00000024373	-	96	80.645	ENSCAFG00020013559	SRSF6	54	90.411	Canis_lupus_dingo
ENSACLG00000024373	-	96	80.645	ENSCHIG00000015890	-	54	90.411	Capra_hircus
ENSACLG00000024373	-	96	79.570	ENSCPOG00000011761	SRSF6	54	89.041	Cavia_porcellus
ENSACLG00000024373	-	96	79.570	ENSCCAG00000026018	-	54	89.041	Cebus_capucinus
ENSACLG00000024373	-	96	79.570	ENSCATG00000030794	SRSF6	54	89.041	Cercocebus_atys
ENSACLG00000024373	-	96	79.570	ENSCLAG00000010247	SRSF6	54	89.041	Chinchilla_lanigera
ENSACLG00000024373	-	96	79.570	ENSCGRG00001022339	Srsf6	54	89.041	Cricetulus_griseus_chok1gshd
ENSACLG00000024373	-	80	92.105	ENSCSEG00000019778	SRSF6	55	91.781	Cynoglossus_semilaevis
ENSACLG00000024373	-	80	89.474	ENSCVAG00000001863	SRSF6	72	89.041	Cyprinodon_variegatus
ENSACLG00000024373	-	77	91.781	ENSDARG00000016783	srsf6b	77	91.781	Danio_rerio
ENSACLG00000024373	-	96	79.570	ENSDORG00000028378	Srsf6	54	89.041	Dipodomys_ordii
ENSACLG00000024373	-	99	84.211	ENSELUG00000024182	SRSF6	72	94.521	Esox_lucius
ENSACLG00000024373	-	86	91.463	ENSELUG00000013506	SRSF6	65	93.151	Esox_lucius
ENSACLG00000024373	-	96	78.495	ENSGALG00000000990	SRSF6	54	89.041	Gallus_gallus
ENSACLG00000024373	-	96	79.570	ENSGGOG00000009808	SRSF6	54	89.041	Gorilla_gorilla
ENSACLG00000024373	-	96	79.570	ENSHGLG00000007348	SRSF6	54	89.041	Heterocephalus_glaber_female
ENSACLG00000024373	-	96	79.570	ENSSTOG00000010866	SRSF6	54	89.041	Ictidomys_tridecemlineatus
ENSACLG00000024373	-	96	79.570	ENSMFAG00000036925	SRSF6	54	89.041	Macaca_fascicularis
ENSACLG00000024373	-	96	79.570	ENSMMUG00000006742	SRSF6	54	89.041	Macaca_mulatta
ENSACLG00000024373	-	96	78.495	ENSMNEG00000027392	-	54	87.671	Macaca_nemestrina
ENSACLG00000024373	-	88	97.619	ENSMAMG00000023477	-	90	97.619	Mastacembelus_armatus
ENSACLG00000024373	-	96	79.570	ENSMAUG00000019086	-	54	89.041	Mesocricetus_auratus
ENSACLG00000024373	-	96	79.570	ENSMICG00000008537	SRSF6	54	89.041	Microcebus_murinus
ENSACLG00000024373	-	80	90.789	ENSMMOG00000015241	-	68	90.411	Mola_mola
ENSACLG00000024373	-	96	79.570	MGP_CAROLIEiJ_G0024606	Srsf6	54	89.041	Mus_caroli
ENSACLG00000024373	-	96	79.570	ENSMUSG00000016921	Srsf6	54	89.041	Mus_musculus
ENSACLG00000024373	-	96	79.570	MGP_PahariEiJ_G0026050	Srsf6	54	89.041	Mus_pahari
ENSACLG00000024373	-	96	79.570	MGP_SPRETEiJ_G0025528	Srsf6	54	89.041	Mus_spretus
ENSACLG00000024373	-	96	79.570	ENSNGAG00000017560	Srsf6	54	89.041	Nannospalax_galili
ENSACLG00000024373	-	96	79.570	ENSNLEG00000006524	SRSF6	54	89.041	Nomascus_leucogenys
ENSACLG00000024373	-	96	79.570	ENSODEG00000016510	-	54	89.041	Octodon_degus
ENSACLG00000024373	-	96	79.570	ENSPTRG00000044686	-	54	89.041	Pan_troglodytes
ENSACLG00000024373	-	96	79.570	ENSPANG00000035224	SRSF6	54	89.041	Papio_anubis
ENSACLG00000024373	-	91	86.047	ENSPKIG00000018463	-	72	90.411	Paramormyrops_kingsleyae
ENSACLG00000024373	-	80	92.105	ENSPKIG00000015603	-	52	91.781	Paramormyrops_kingsleyae
ENSACLG00000024373	-	89	71.264	ENSPKIG00000015703	-	54	73.913	Paramormyrops_kingsleyae
ENSACLG00000024373	-	96	79.570	ENSPCIG00000003820	SRSF6	54	89.041	Phascolarctos_cinereus
ENSACLG00000024373	-	96	79.570	ENSPCOG00000026364	SRSF6	54	89.041	Propithecus_coquereli
ENSACLG00000024373	-	89	89.412	ENSPNAG00000023179	-	56	91.781	Pygocentrus_nattereri
ENSACLG00000024373	-	89	83.529	ENSRBIG00000041414	SRSF6	56	89.041	Rhinopithecus_bieti
ENSACLG00000024373	-	96	79.570	ENSRROG00000029989	SRSF6	54	89.041	Rhinopithecus_roxellana
ENSACLG00000024373	-	96	79.570	ENSSBOG00000033708	-	54	89.041	Saimiri_boliviensis_boliviensis
ENSACLG00000024373	-	80	90.789	ENSSMAG00000014861	-	54	90.411	Scophthalmus_maximus
ENSACLG00000024373	-	87	98.795	ENSSDUG00000011036	-	90	98.795	Seriola_dumerili
ENSACLG00000024373	-	87	98.795	ENSSLDG00000014858	-	90	98.795	Seriola_lalandi_dorsalis
ENSACLG00000024373	-	96	78.495	ENSSPUG00000004967	SRSF6	54	89.041	Sphenodon_punctatus
ENSACLG00000024373	-	88	97.619	ENSSPAG00000021913	-	88	97.619	Stegastes_partitus
ENSACLG00000024373	-	80	92.105	ENSTRUG00000021397	-	79	91.781	Takifugu_rubripes
ENSACLG00000024373	-	96	80.645	ENSUAMG00000003559	SRSF6	54	90.411	Ursus_americanus