EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000024566 (Gene tree)
Gene ID: 113031099
Gene Symbol: smfn
Alias: zgc:73191
Full Name: RNA exonuclease 2
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 13375 bases
Position: chr10:436353-449727
Accession: 113031099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000036284	RNase_T	PF00929.24	4.2e-33	1	1
ENSACLP00000036276	RNase_T	PF00929.24	4.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000037144	-	1527	-	ENSACLP00000036284	259 (aa)	XP_026038773	UPI000329BA0A
ENSACLT00000037136	-	570	-	ENSACLP00000036276	189 (aa)	-	-

Gene Model

Click here to download ENSACLG00000024566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000024566's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000024566	smfn	98	78.723	ENSG00000076043	REXO2	99	78.723	Homo_sapiens
ENSACLG00000024566	smfn	58	89.189	ENSAPOG00000011971	smfn	98	87.719	Acanthochromis_polyacanthus
ENSACLG00000024566	smfn	98	78.723	ENSAMEG00000013263	REXO2	95	73.214	Ailuropoda_melanoleuca
ENSACLG00000024566	smfn	95	91.111	ENSACIG00000023553	smfn	100	89.730	Amphilophus_citrinellus
ENSACLG00000024566	smfn	67	90.698	ENSAOCG00000011565	smfn	79	90.698	Amphiprion_ocellaris
ENSACLG00000024566	smfn	95	91.160	ENSAPEG00000012435	smfn	90	74.206	Amphiprion_percula
ENSACLG00000024566	smfn	95	87.845	ENSATEG00000015385	smfn	97	71.324	Anabas_testudineus
ENSACLG00000024566	smfn	95	79.121	ENSAPLG00000005045	REXO2	93	76.842	Anas_platyrhynchos
ENSACLG00000024566	smfn	89	73.214	ENSACAG00000011631	REXO2	91	69.744	Anolis_carolinensis
ENSACLG00000024566	smfn	98	79.255	ENSANAG00000020834	REXO2	95	72.247	Aotus_nancymaae
ENSACLG00000024566	smfn	61	64.655	ENSANAG00000027457	-	98	59.441	Aotus_nancymaae
ENSACLG00000024566	smfn	98	78.723	ENSBTAG00000005843	REXO2	95	72.247	Bos_taurus
ENSACLG00000024566	smfn	89	48.521	WBGene00007429	C08B6.8	92	55.556	Caenorhabditis_elegans
ENSACLG00000024566	smfn	98	78.191	ENSCJAG00000012434	REXO2	95	71.366	Callithrix_jacchus
ENSACLG00000024566	smfn	98	77.660	ENSCAFG00000013511	REXO2	85	77.114	Canis_familiaris
ENSACLG00000024566	smfn	98	78.723	ENSCAFG00020002513	REXO2	85	78.109	Canis_lupus_dingo
ENSACLG00000024566	smfn	98	78.723	ENSCHIG00000009264	REXO2	95	72.247	Capra_hircus
ENSACLG00000024566	smfn	98	69.681	ENSTSYG00000027948	-	95	69.681	Carlito_syrichta
ENSACLG00000024566	smfn	98	78.723	ENSTSYG00000002237	REXO2	95	71.806	Carlito_syrichta
ENSACLG00000024566	smfn	98	79.255	ENSCAPG00000006093	REXO2	99	79.255	Cavia_aperea
ENSACLG00000024566	smfn	98	79.255	ENSCPOG00000010548	REXO2	97	71.304	Cavia_porcellus
ENSACLG00000024566	smfn	98	79.255	ENSCCAG00000034979	REXO2	95	72.247	Cebus_capucinus
ENSACLG00000024566	smfn	98	78.723	ENSCATG00000015278	REXO2	95	73.214	Cercocebus_atys
ENSACLG00000024566	smfn	98	79.255	ENSCLAG00000011195	REXO2	94	73.991	Chinchilla_lanigera
ENSACLG00000024566	smfn	98	78.723	ENSCSAG00000002754	REXO2	95	73.214	Chlorocebus_sabaeus
ENSACLG00000024566	smfn	98	77.660	ENSCHOG00000000642	-	95	71.875	Choloepus_hoffmanni
ENSACLG00000024566	smfn	72	71.942	ENSCPBG00000009359	REXO2	99	69.930	Chrysemys_picta_bellii
ENSACLG00000024566	smfn	88	61.446	ENSCING00000009858	-	88	60.656	Ciona_intestinalis
ENSACLG00000024566	smfn	98	78.723	ENSCANG00000034756	REXO2	95	73.214	Colobus_angolensis_palliatus
ENSACLG00000024566	smfn	98	77.660	ENSCGRG00001013673	-	94	79.167	Cricetulus_griseus_chok1gshd
ENSACLG00000024566	smfn	98	76.064	ENSCGRG00001010922	-	94	77.604	Cricetulus_griseus_chok1gshd
ENSACLG00000024566	smfn	98	78.723	ENSCGRG00001019814	-	97	71.304	Cricetulus_griseus_chok1gshd
ENSACLG00000024566	smfn	98	78.723	ENSCGRG00000006235	Rexo2	97	71.304	Cricetulus_griseus_crigri
ENSACLG00000024566	smfn	97	81.081	ENSCSEG00000007214	smfn	99	67.153	Cynoglossus_semilaevis
ENSACLG00000024566	smfn	89	88.757	ENSCVAG00000012008	smfn	91	88.757	Cyprinodon_variegatus
ENSACLG00000024566	smfn	97	79.781	ENSDARG00000009806	smfn	74	80.208	Danio_rerio
ENSACLG00000024566	smfn	85	83.125	ENSDNOG00000046533	REXO2	91	77.487	Dasypus_novemcinctus
ENSACLG00000024566	smfn	98	61.702	ENSDORG00000025142	-	92	59.048	Dipodomys_ordii
ENSACLG00000024566	smfn	98	79.255	ENSDORG00000011255	Rexo2	85	78.607	Dipodomys_ordii
ENSACLG00000024566	smfn	88	52.695	FBgn0039115	CG10214	91	51.042	Drosophila_melanogaster
ENSACLG00000024566	smfn	92	73.410	ENSEBUG00000013964	REXO2	70	69.458	Eptatretus_burgeri
ENSACLG00000024566	smfn	98	78.723	ENSEASG00005006674	REXO2	85	78.109	Equus_asinus_asinus
ENSACLG00000024566	smfn	98	78.723	ENSECAG00000005988	REXO2	85	78.109	Equus_caballus
ENSACLG00000024566	smfn	96	78.689	ENSELUG00000020072	smfn	69	78.392	Esox_lucius
ENSACLG00000024566	smfn	98	78.723	ENSFCAG00000018632	REXO2	95	71.806	Felis_catus
ENSACLG00000024566	smfn	95	79.121	ENSFALG00000010044	REXO2	92	77.838	Ficedula_albicollis
ENSACLG00000024566	smfn	98	79.255	ENSFDAG00000011764	REXO2	95	72.247	Fukomys_damarensis
ENSACLG00000024566	smfn	91	81.034	ENSGMOG00000006370	smfn	99	80.208	Gadus_morhua
ENSACLG00000024566	smfn	95	79.670	ENSGALG00000035980	REXO2	84	79.592	Gallus_gallus
ENSACLG00000024566	smfn	96	84.783	ENSGAFG00000015349	smfn	77	80.465	Gambusia_affinis
ENSACLG00000024566	smfn	90	87.059	ENSGACG00000020096	smfn	92	85.484	Gasterosteus_aculeatus
ENSACLG00000024566	smfn	95	77.473	ENSGAGG00000021126	REXO2	96	69.683	Gopherus_agassizii
ENSACLG00000024566	smfn	98	78.723	ENSGGOG00000023267	REXO2	98	69.417	Gorilla_gorilla
ENSACLG00000024566	smfn	96	77.912	ENSHBUG00000020097	REXO2	100	77.912	Haplochromis_burtoni
ENSACLG00000024566	smfn	98	78.723	ENSHGLG00000013556	REXO2	95	73.214	Heterocephalus_glaber_female
ENSACLG00000024566	smfn	98	79.255	ENSHGLG00100005257	REXO2	95	73.661	Heterocephalus_glaber_male
ENSACLG00000024566	smfn	94	84.270	ENSHCOG00000007122	smfn	98	84.270	Hippocampus_comes
ENSACLG00000024566	smfn	97	81.622	ENSIPUG00000020440	rexo2	76	80.000	Ictalurus_punctatus
ENSACLG00000024566	smfn	98	79.255	ENSSTOG00000012465	REXO2	95	73.661	Ictidomys_tridecemlineatus
ENSACLG00000024566	smfn	98	55.851	ENSJJAG00000022605	-	87	55.660	Jaculus_jaculus
ENSACLG00000024566	smfn	98	79.255	ENSJJAG00000013710	-	95	72.247	Jaculus_jaculus
ENSACLG00000024566	smfn	95	86.667	ENSKMAG00000016795	smfn	70	85.787	Kryptolebias_marmoratus
ENSACLG00000024566	smfn	98	81.818	ENSLBEG00000006021	smfn	99	81.818	Labrus_bergylta
ENSACLG00000024566	smfn	95	70.330	ENSLACG00000018623	REXO2	91	64.414	Latimeria_chalumnae
ENSACLG00000024566	smfn	98	80.851	ENSLOCG00000002389	smfn	95	79.397	Lepisosteus_oculatus
ENSACLG00000024566	smfn	98	78.723	ENSLAFG00000012451	REXO2	85	78.109	Loxodonta_africana
ENSACLG00000024566	smfn	98	78.723	ENSMFAG00000041155	REXO2	95	73.214	Macaca_fascicularis
ENSACLG00000024566	smfn	98	78.723	ENSMMUG00000012269	REXO2	95	73.214	Macaca_mulatta
ENSACLG00000024566	smfn	98	78.723	ENSMNEG00000033379	REXO2	95	73.214	Macaca_nemestrina
ENSACLG00000024566	smfn	98	78.723	ENSMLEG00000036571	REXO2	95	73.214	Mandrillus_leucophaeus
ENSACLG00000024566	smfn	95	91.111	ENSMAMG00000021209	smfn	75	88.462	Mastacembelus_armatus
ENSACLG00000024566	smfn	100	100.000	ENSMZEG00005020730	REXO2	100	100.000	Maylandia_zebra
ENSACLG00000024566	smfn	100	100.000	ENSMZEG00005023224	-	100	100.000	Maylandia_zebra
ENSACLG00000024566	smfn	81	77.070	ENSMGAG00000003026	REXO2	99	75.155	Meleagris_gallopavo
ENSACLG00000024566	smfn	98	78.723	ENSMAUG00000014576	Rexo2	97	71.304	Mesocricetus_auratus
ENSACLG00000024566	smfn	98	79.255	ENSMICG00000010094	REXO2	85	78.607	Microcebus_murinus
ENSACLG00000024566	smfn	98	78.723	ENSMOCG00000009016	Rexo2	97	71.304	Microtus_ochrogaster
ENSACLG00000024566	smfn	97	82.796	ENSMMOG00000006430	smfn	99	67.293	Mola_mola
ENSACLG00000024566	smfn	98	79.787	ENSMODG00000013913	REXO2	92	75.463	Monodelphis_domestica
ENSACLG00000024566	smfn	95	85.714	ENSMALG00000018130	smfn	68	75.630	Monopterus_albus
ENSACLG00000024566	smfn	95	78.571	MGP_CAROLIEiJ_G0032166	Rexo2	98	69.828	Mus_caroli
ENSACLG00000024566	smfn	95	78.571	ENSMUSG00000032026	Rexo2	97	70.000	Mus_musculus
ENSACLG00000024566	smfn	95	78.571	MGP_PahariEiJ_G0015034	Rexo2	97	70.000	Mus_pahari
ENSACLG00000024566	smfn	95	78.571	MGP_SPRETEiJ_G0033305	Rexo2	97	70.000	Mus_spretus
ENSACLG00000024566	smfn	98	78.723	ENSMPUG00000003947	REXO2	95	73.214	Mustela_putorius_furo
ENSACLG00000024566	smfn	98	78.191	ENSMLUG00000009030	REXO2	85	77.612	Myotis_lucifugus
ENSACLG00000024566	smfn	98	79.787	ENSNGAG00000008819	Rexo2	94	80.829	Nannospalax_galili
ENSACLG00000024566	smfn	96	96.685	ENSNBRG00000006529	smfn	96	96.685	Neolamprologus_brichardi
ENSACLG00000024566	smfn	98	78.723	ENSNLEG00000029745	REXO2	95	72.124	Nomascus_leucogenys
ENSACLG00000024566	smfn	98	79.255	ENSMEUG00000011558	REXO2	92	78.607	Notamacropus_eugenii
ENSACLG00000024566	smfn	70	74.627	ENSOPRG00000011076	REXO2	92	51.613	Ochotona_princeps
ENSACLG00000024566	smfn	98	79.255	ENSODEG00000009750	-	99	79.255	Octodon_degus
ENSACLG00000024566	smfn	85	64.596	ENSODEG00000016046	-	91	63.536	Octodon_degus
ENSACLG00000024566	smfn	95	98.324	ENSONIG00000001954	smfn	100	97.835	Oreochromis_niloticus
ENSACLG00000024566	smfn	98	77.660	ENSOANG00000001754	REXO2	81	79.167	Ornithorhynchus_anatinus
ENSACLG00000024566	smfn	98	79.255	ENSOCUG00000004274	REXO2	90	73.661	Oryctolagus_cuniculus
ENSACLG00000024566	smfn	95	83.516	ENSORLG00000005119	smfn	74	68.924	Oryzias_latipes
ENSACLG00000024566	smfn	95	84.066	ENSORLG00020010121	smfn	64	82.741	Oryzias_latipes_hni
ENSACLG00000024566	smfn	95	83.978	ENSORLG00015015699	smfn	65	82.000	Oryzias_latipes_hsok
ENSACLG00000024566	smfn	74	79.433	ENSOMEG00000008940	-	99	79.433	Oryzias_melastigma
ENSACLG00000024566	smfn	96	80.435	ENSOMEG00000016878	REXO2	75	79.310	Oryzias_melastigma
ENSACLG00000024566	smfn	98	79.255	ENSOGAG00000016860	REXO2	95	72.247	Otolemur_garnettii
ENSACLG00000024566	smfn	98	78.723	ENSOARG00000001040	REXO2	93	77.889	Ovis_aries
ENSACLG00000024566	smfn	98	78.723	ENSPPAG00000039849	REXO2	95	72.124	Pan_paniscus
ENSACLG00000024566	smfn	98	78.723	ENSPPRG00000007255	REXO2	95	71.806	Panthera_pardus
ENSACLG00000024566	smfn	98	78.723	ENSPTIG00000015578	REXO2	99	78.723	Panthera_tigris_altaica
ENSACLG00000024566	smfn	98	78.723	ENSPTRG00000004306	REXO2	95	72.124	Pan_troglodytes
ENSACLG00000024566	smfn	98	78.723	ENSPANG00000010675	REXO2	95	73.214	Papio_anubis
ENSACLG00000024566	smfn	97	80.541	ENSPKIG00000000911	smfn	77	83.784	Paramormyrops_kingsleyae
ENSACLG00000024566	smfn	95	78.571	ENSPSIG00000005151	REXO2	80	73.636	Pelodiscus_sinensis
ENSACLG00000024566	smfn	95	82.873	ENSPMGG00000007442	smfn	97	82.514	Periophthalmus_magnuspinnatus
ENSACLG00000024566	smfn	84	71.429	ENSPEMG00000001421	Rexo2	97	58.261	Peromyscus_maniculatus_bairdii
ENSACLG00000024566	smfn	61	76.724	ENSPMAG00000001022	REXO2	100	76.724	Petromyzon_marinus
ENSACLG00000024566	smfn	98	79.787	ENSPCIG00000011227	REXO2	58	75.463	Phascolarctos_cinereus
ENSACLG00000024566	smfn	95	86.188	ENSPFOG00000017861	smfn	99	84.500	Poecilia_formosa
ENSACLG00000024566	smfn	79	87.248	ENSPLAG00000007327	REXO2	77	76.847	Poecilia_latipinna
ENSACLG00000024566	smfn	95	86.740	ENSPMEG00000017343	smfn	80	80.088	Poecilia_mexicana
ENSACLG00000024566	smfn	96	85.326	ENSPREG00000016438	smfn	80	78.761	Poecilia_reticulata
ENSACLG00000024566	smfn	98	78.723	ENSPPYG00000003895	REXO2	95	72.124	Pongo_abelii
ENSACLG00000024566	smfn	98	78.191	ENSPCAG00000005237	REXO2	85	77.612	Procavia_capensis
ENSACLG00000024566	smfn	77	83.562	ENSPCOG00000027639	REXO2	85	81.325	Propithecus_coquereli
ENSACLG00000024566	smfn	84	76.250	ENSPVAG00000005295	REXO2	85	66.010	Pteropus_vampyrus
ENSACLG00000024566	smfn	100	99.614	ENSPNYG00000018401	smfn	100	99.614	Pundamilia_nyererei
ENSACLG00000024566	smfn	96	79.891	ENSPNAG00000005290	smfn	97	65.649	Pygocentrus_nattereri
ENSACLG00000024566	smfn	98	76.596	ENSRNOG00000018939	Rexo2	97	70.000	Rattus_norvegicus
ENSACLG00000024566	smfn	98	78.723	ENSRBIG00000037809	REXO2	95	73.214	Rhinopithecus_bieti
ENSACLG00000024566	smfn	98	78.723	ENSRROG00000038928	REXO2	95	73.214	Rhinopithecus_roxellana
ENSACLG00000024566	smfn	95	41.711	YLR059C	REX2	75	42.574	Saccharomyces_cerevisiae
ENSACLG00000024566	smfn	98	79.255	ENSSBOG00000028651	REXO2	95	72.247	Saimiri_boliviensis_boliviensis
ENSACLG00000024566	smfn	98	79.787	ENSSHAG00000008008	REXO2	92	75.000	Sarcophilus_harrisii
ENSACLG00000024566	smfn	95	80.769	ENSSFOG00015022414	smfn	97	80.769	Scleropages_formosus
ENSACLG00000024566	smfn	95	85.635	ENSSMAG00000003168	smfn	99	69.597	Scophthalmus_maximus
ENSACLG00000024566	smfn	100	86.387	ENSSDUG00000015624	smfn	81	80.087	Seriola_dumerili
ENSACLG00000024566	smfn	100	85.340	ENSSLDG00000014005	smfn	81	79.476	Seriola_lalandi_dorsalis
ENSACLG00000024566	smfn	67	86.508	ENSSARG00000014530	REXO2	99	86.508	Sorex_araneus
ENSACLG00000024566	smfn	84	71.250	ENSSPUG00000006005	REXO2	85	71.250	Sphenodon_punctatus
ENSACLG00000024566	smfn	95	90.608	ENSSPAG00000001530	smfn	99	89.674	Stegastes_partitus
ENSACLG00000024566	smfn	98	78.723	ENSSSCG00000015056	REXO2	95	72.124	Sus_scrofa
ENSACLG00000024566	smfn	95	78.022	ENSTGUG00000000121	REXO2	97	70.259	Taeniopygia_guttata
ENSACLG00000024566	smfn	95	85.475	ENSTRUG00000021529	smfn	75	82.673	Takifugu_rubripes
ENSACLG00000024566	smfn	95	85.635	ENSTNIG00000008588	smfn	100	76.496	Tetraodon_nigroviridis
ENSACLG00000024566	smfn	98	79.255	ENSTBEG00000017040	REXO2	95	72.566	Tupaia_belangeri
ENSACLG00000024566	smfn	98	78.191	ENSTTRG00000014928	REXO2	85	77.612	Tursiops_truncatus
ENSACLG00000024566	smfn	98	72.340	ENSUAMG00000019096	REXO2	97	74.603	Ursus_americanus
ENSACLG00000024566	smfn	98	78.723	ENSUMAG00000003770	REXO2	95	73.214	Ursus_maritimus
ENSACLG00000024566	smfn	88	62.651	ENSVPAG00000006301	REXO2	99	60.638	Vicugna_pacos
ENSACLG00000024566	smfn	99	78.307	ENSVVUG00000025223	REXO2	85	78.109	Vulpes_vulpes
ENSACLG00000024566	smfn	95	80.328	ENSXETG00000012648	rexo2	95	70.690	Xenopus_tropicalis
ENSACLG00000024566	smfn	96	83.152	ENSXCOG00000018838	smfn	95	82.796	Xiphophorus_couchianus
ENSACLG00000024566	smfn	96	83.152	ENSXMAG00000021125	smfn	89	66.426	Xiphophorus_maculatus