EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000024674 (Gene tree)
Gene ID: 113023876
Gene Symbol: SRL (1 of many)
Alias: SAR
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 16372 bases
Position: chr6:11447158-11463529
Accession: 11295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000036429	MMR_HSR1	PF01926.23	3.3e-08	1	1
ENSACLP00000036409	MMR_HSR1	PF01926.23	3.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000037291	SRL (1 of many)-202	4239	-	ENSACLP00000036429	742 (aa)	-	-
ENSACLT00000037271	SRL (1 of many)-201	4428	-	ENSACLP00000036409	805 (aa)	-	-

Gene Model

Click here to download ENSACLG00000024674's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000024674's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000024674	SRL	52	32.134	ENSACLG00000007581	ehd3	70	31.122
ENSACLG00000024674	SRL	52	33.248	ENSACLG00000017182	ehd4	68	33.247
ENSACLG00000024674	SRL	52	31.443	ENSACLG00000016016	ehd1a	72	30.227
ENSACLG00000024674	SRL	58	32.426	ENSACLG00000021088	ehd2b	71	32.593
ENSACLG00000024674	SRL	58	74.569	ENSACLG00000027685	srl	99	74.569

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000024674	SRL	57	71.648	ENSG00000185739	SRL	99	73.121	Homo_sapiens
ENSACLG00000024674	SRL	58	73.291	ENSAPOG00000018093	srl	99	74.449	Acanthochromis_polyacanthus
ENSACLG00000024674	SRL	64	82.552	ENSAPOG00000012432	SRL	99	86.184	Acanthochromis_polyacanthus
ENSACLG00000024674	SRL	55	74.321	ENSAMEG00000010862	SRL	51	69.358	Ailuropoda_melanoleuca
ENSACLG00000024674	SRL	57	89.394	ENSACIG00000015419	SRL	100	89.394	Amphilophus_citrinellus
ENSACLG00000024674	SRL	58	74.514	ENSACIG00000015799	srl	99	74.298	Amphilophus_citrinellus
ENSACLG00000024674	SRL	55	76.225	ENSAOCG00000007574	srl	100	74.497	Amphiprion_ocellaris
ENSACLG00000024674	SRL	58	85.470	ENSAOCG00000017049	SRL	99	86.538	Amphiprion_ocellaris
ENSACLG00000024674	SRL	54	77.250	ENSAPEG00000006911	srl	97	73.077	Amphiprion_percula
ENSACLG00000024674	SRL	58	81.410	ENSAPEG00000006533	SRL	99	82.692	Amphiprion_percula
ENSACLG00000024674	SRL	67	90.123	ENSATEG00000009643	SRL	99	79.892	Anabas_testudineus
ENSACLG00000024674	SRL	57	74.781	ENSATEG00000024315	srl	97	73.504	Anabas_testudineus
ENSACLG00000024674	SRL	54	76.250	ENSACAG00000016380	SRL	83	71.368	Anolis_carolinensis
ENSACLG00000024674	SRL	54	77.694	ENSAMXG00000018789	srl	88	74.242	Astyanax_mexicanus
ENSACLG00000024674	SRL	56	80.914	ENSAMXG00000038693	SRL	100	75.604	Astyanax_mexicanus
ENSACLG00000024674	SRL	56	72.467	ENSBTAG00000001078	SRL	79	57.037	Bos_taurus
ENSACLG00000024674	SRL	57	72.088	ENSCJAG00000019750	SRL	93	73.187	Callithrix_jacchus
ENSACLG00000024674	SRL	57	72.308	ENSCAFG00000019233	SRL	82	72.308	Canis_familiaris
ENSACLG00000024674	SRL	57	72.308	ENSCAFG00020025024	SRL	54	72.308	Canis_lupus_dingo
ENSACLG00000024674	SRL	56	72.467	ENSCHIG00000017927	SRL	55	72.467	Capra_hircus
ENSACLG00000024674	SRL	57	71.868	ENSTSYG00000007919	SRL	99	73.576	Carlito_syrichta
ENSACLG00000024674	SRL	57	71.868	ENSCPOG00000012643	SRL	94	72.967	Cavia_porcellus
ENSACLG00000024674	SRL	57	71.259	ENSCCAG00000032646	SRL	100	75.255	Cebus_capucinus
ENSACLG00000024674	SRL	55	74.201	ENSCATG00000032227	-	93	72.747	Cercocebus_atys
ENSACLG00000024674	SRL	57	71.868	ENSCLAG00000016242	SRL	94	72.967	Chinchilla_lanigera
ENSACLG00000024674	SRL	57	72.648	ENSCSAG00000009635	-	50	67.653	Chlorocebus_sabaeus
ENSACLG00000024674	SRL	54	76.382	ENSCHOG00000001618	SRL	52	76.382	Choloepus_hoffmanni
ENSACLG00000024674	SRL	57	75.561	ENSCPBG00000026371	SRL	94	70.825	Chrysemys_picta_bellii
ENSACLG00000024674	SRL	50	57.724	ENSCING00000005231	-	94	54.869	Ciona_intestinalis
ENSACLG00000024674	SRL	57	71.648	ENSCANG00000035872	SRL	99	73.121	Colobus_angolensis_palliatus
ENSACLG00000024674	SRL	68	64.919	ENSCGRG00001016630	Srl	94	72.747	Cricetulus_griseus_chok1gshd
ENSACLG00000024674	SRL	68	64.919	ENSCGRG00000005458	Srl	94	72.747	Cricetulus_griseus_crigri
ENSACLG00000024674	SRL	57	82.857	ENSCSEG00000011866	SRL	89	83.736	Cynoglossus_semilaevis
ENSACLG00000024674	SRL	58	73.650	ENSCSEG00000016151	srl	97	73.548	Cynoglossus_semilaevis
ENSACLG00000024674	SRL	96	63.308	ENSCVAG00000022465	SRL	100	64.338	Cyprinodon_variegatus
ENSACLG00000024674	SRL	58	74.730	ENSCVAG00000003513	srl	97	74.837	Cyprinodon_variegatus
ENSACLG00000024674	SRL	54	78.750	ENSDARG00000104587	srl	95	75.217	Danio_rerio
ENSACLG00000024674	SRL	53	80.357	ENSDARG00000112959	CABZ01072309.1	100	79.135	Danio_rerio
ENSACLG00000024674	SRL	57	72.747	ENSDNOG00000011643	SRL	55	69.959	Dasypus_novemcinctus
ENSACLG00000024674	SRL	57	72.747	ENSDORG00000014807	Srl	94	72.747	Dipodomys_ordii
ENSACLG00000024674	SRL	54	75.000	ENSEASG00005000942	SRL	59	68.263	Equus_asinus_asinus
ENSACLG00000024674	SRL	55	74.693	ENSECAG00000024219	SRL	96	71.215	Equus_caballus
ENSACLG00000024674	SRL	70	80.201	ENSELUG00000022266	SRL	75	58.333	Esox_lucius
ENSACLG00000024674	SRL	54	78.750	ENSELUG00000015616	srl	94	73.718	Esox_lucius
ENSACLG00000024674	SRL	55	74.321	ENSFCAG00000022075	SRL	97	70.851	Felis_catus
ENSACLG00000024674	SRL	55	75.430	ENSFALG00000004328	SRL	63	73.068	Ficedula_albicollis
ENSACLG00000024674	SRL	57	71.868	ENSFDAG00000006199	SRL	94	72.967	Fukomys_damarensis
ENSACLG00000024674	SRL	58	74.730	ENSFHEG00000011239	srl	96	75.439	Fundulus_heteroclitus
ENSACLG00000024674	SRL	99	67.038	ENSFHEG00000011854	SRL	100	85.065	Fundulus_heteroclitus
ENSACLG00000024674	SRL	54	77.694	ENSGMOG00000014954	srl	100	73.233	Gadus_morhua
ENSACLG00000024674	SRL	55	75.184	ENSGALG00000038884	SRL	93	73.510	Gallus_gallus
ENSACLG00000024674	SRL	96	66.582	ENSGAFG00000016984	SRL	99	85.498	Gambusia_affinis
ENSACLG00000024674	SRL	58	74.730	ENSGAFG00000000010	srl	98	74.569	Gambusia_affinis
ENSACLG00000024674	SRL	54	77.694	ENSGACG00000011332	srl	99	72.805	Gasterosteus_aculeatus
ENSACLG00000024674	SRL	57	72.648	ENSGGOG00000011312	-	93	72.747	Gorilla_gorilla
ENSACLG00000024674	SRL	100	98.758	ENSHBUG00000015710	SRL	100	98.758	Haplochromis_burtoni
ENSACLG00000024674	SRL	58	74.569	ENSHBUG00000007581	srl	99	74.569	Haplochromis_burtoni
ENSACLG00000024674	SRL	57	71.648	ENSHGLG00000015271	SRL	94	72.747	Heterocephalus_glaber_female
ENSACLG00000024674	SRL	57	71.648	ENSHGLG00100019378	SRL	94	72.747	Heterocephalus_glaber_male
ENSACLG00000024674	SRL	58	73.504	ENSHCOG00000008687	srl	99	74.026	Hippocampus_comes
ENSACLG00000024674	SRL	99	60.240	ENSHCOG00000001012	SRL	93	80.000	Hippocampus_comes
ENSACLG00000024674	SRL	57	70.742	ENSIPUG00000011609	SRL	100	70.524	Ictalurus_punctatus
ENSACLG00000024674	SRL	58	73.002	ENSIPUG00000012513	srl	96	73.002	Ictalurus_punctatus
ENSACLG00000024674	SRL	55	75.062	ENSSTOG00000021151	-	94	72.967	Ictidomys_tridecemlineatus
ENSACLG00000024674	SRL	57	72.967	ENSJJAG00000016400	Srl	94	72.747	Jaculus_jaculus
ENSACLG00000024674	SRL	99	68.441	ENSKMAG00000019537	SRL	100	87.004	Kryptolebias_marmoratus
ENSACLG00000024674	SRL	53	79.481	ENSKMAG00000014115	srl	97	74.066	Kryptolebias_marmoratus
ENSACLG00000024674	SRL	54	77.750	ENSLBEG00000026643	srl	97	73.504	Labrus_bergylta
ENSACLG00000024674	SRL	58	84.829	ENSLBEG00000013811	SRL	98	84.402	Labrus_bergylta
ENSACLG00000024674	SRL	57	73.407	ENSLACG00000002825	SRL	98	72.967	Latimeria_chalumnae
ENSACLG00000024674	SRL	55	77.451	ENSLOCG00000002644	srl	96	74.620	Lepisosteus_oculatus
ENSACLG00000024674	SRL	89	54.798	ENSLAFG00000006329	SRL	56	67.583	Loxodonta_africana
ENSACLG00000024674	SRL	55	72.794	ENSMFAG00000037383	SRL	99	73.121	Macaca_fascicularis
ENSACLG00000024674	SRL	57	72.747	ENSMNEG00000019236	-	93	72.747	Macaca_nemestrina
ENSACLG00000024674	SRL	58	68.677	ENSMLEG00000032156	SRL	95	69.266	Mandrillus_leucophaeus
ENSACLG00000024674	SRL	78	72.588	ENSMAMG00000013756	SRL	99	65.029	Mastacembelus_armatus
ENSACLG00000024674	SRL	57	74.561	ENSMAMG00000023322	srl	96	73.866	Mastacembelus_armatus
ENSACLG00000024674	SRL	58	74.569	ENSMZEG00005004548	srl	99	74.569	Maylandia_zebra
ENSACLG00000024674	SRL	99	99.372	ENSMZEG00005004010	SRL	100	99.372	Maylandia_zebra
ENSACLG00000024674	SRL	80	57.011	ENSMGAG00000009342	SRL	92	80.000	Meleagris_gallopavo
ENSACLG00000024674	SRL	55	75.000	ENSMICG00000032307	SRL	94	73.304	Microcebus_murinus
ENSACLG00000024674	SRL	57	72.527	ENSMOCG00000008208	Srl	94	72.308	Microtus_ochrogaster
ENSACLG00000024674	SRL	58	73.434	ENSMMOG00000013970	srl	100	73.434	Mola_mola
ENSACLG00000024674	SRL	54	87.000	ENSMMOG00000021572	SRL	99	82.766	Mola_mola
ENSACLG00000024674	SRL	56	73.789	ENSMODG00000016380	-	50	73.789	Monodelphis_domestica
ENSACLG00000024674	SRL	54	85.390	ENSMALG00000000670	SRL	98	84.491	Monopterus_albus
ENSACLG00000024674	SRL	58	73.434	ENSMALG00000005039	srl	99	73.276	Monopterus_albus
ENSACLG00000024674	SRL	68	64.738	MGP_CAROLIEiJ_G0020400	Srl	94	72.747	Mus_caroli
ENSACLG00000024674	SRL	55	75.062	ENSMUSG00000022519	Srl	94	72.747	Mus_musculus
ENSACLG00000024674	SRL	65	65.926	MGP_PahariEiJ_G0016108	Srl	57	66.111	Mus_pahari
ENSACLG00000024674	SRL	55	75.062	MGP_SPRETEiJ_G0021294	Srl	94	72.747	Mus_spretus
ENSACLG00000024674	SRL	55	74.321	ENSMPUG00000015025	SRL	54	72.308	Mustela_putorius_furo
ENSACLG00000024674	SRL	57	72.747	ENSMLUG00000030733	SRL	56	72.747	Myotis_lucifugus
ENSACLG00000024674	SRL	57	73.187	ENSNGAG00000019741	Srl	94	72.967	Nannospalax_galili
ENSACLG00000024674	SRL	58	74.946	ENSNBRG00000023775	srl	97	74.145	Neolamprologus_brichardi
ENSACLG00000024674	SRL	100	97.270	ENSNBRG00000002422	SRL	100	97.270	Neolamprologus_brichardi
ENSACLG00000024674	SRL	58	70.070	ENSNLEG00000029051	SRL	95	70.642	Nomascus_leucogenys
ENSACLG00000024674	SRL	54	75.188	ENSOPRG00000000477	-	52	68.352	Ochotona_princeps
ENSACLG00000024674	SRL	57	72.527	ENSODEG00000013256	SRL	94	73.626	Octodon_degus
ENSACLG00000024674	SRL	58	74.624	ENSONIG00000005192	srl	96	74.624	Oreochromis_niloticus
ENSACLG00000024674	SRL	59	70.737	ENSOCUG00000025140	SRL	51	70.737	Oryctolagus_cuniculus
ENSACLG00000024674	SRL	57	75.000	ENSORLG00000008291	srl	93	76.904	Oryzias_latipes
ENSACLG00000024674	SRL	100	63.758	ENSORLG00000015064	SRL	98	83.369	Oryzias_latipes
ENSACLG00000024674	SRL	54	78.250	ENSORLG00020019784	srl	81	77.150	Oryzias_latipes_hni
ENSACLG00000024674	SRL	57	84.416	ENSORLG00020018173	SRL	98	83.585	Oryzias_latipes_hni
ENSACLG00000024674	SRL	57	84.416	ENSORLG00015019063	SRL	98	83.801	Oryzias_latipes_hsok
ENSACLG00000024674	SRL	57	75.000	ENSORLG00015009342	srl	91	75.000	Oryzias_latipes_hsok
ENSACLG00000024674	SRL	84	74.952	ENSOMEG00000005682	SRL	99	68.455	Oryzias_melastigma
ENSACLG00000024674	SRL	54	78.250	ENSOMEG00000010006	srl	97	75.610	Oryzias_melastigma
ENSACLG00000024674	SRL	63	66.275	ENSOGAG00000029266	SRL	60	66.275	Otolemur_garnettii
ENSACLG00000024674	SRL	55	73.710	ENSOARG00000003074	SRL	55	72.467	Ovis_aries
ENSACLG00000024674	SRL	57	72.648	ENSPPAG00000024919	-	99	73.121	Pan_paniscus
ENSACLG00000024674	SRL	55	72.794	ENSPPRG00000010274	SRL	99	72.893	Panthera_pardus
ENSACLG00000024674	SRL	55	72.794	ENSPTIG00000015162	SRL	99	72.893	Panthera_tigris_altaica
ENSACLG00000024674	SRL	57	72.648	ENSPTRG00000007712	SRL	99	73.121	Pan_troglodytes
ENSACLG00000024674	SRL	57	71.648	ENSPANG00000013804	SRL	95	72.747	Papio_anubis
ENSACLG00000024674	SRL	57	75.922	ENSPKIG00000006405	srl	95	75.922	Paramormyrops_kingsleyae
ENSACLG00000024674	SRL	97	56.259	ENSPKIG00000024974	SRL	90	72.570	Paramormyrops_kingsleyae
ENSACLG00000024674	SRL	85	56.484	ENSPSIG00000008586	SRL	73	56.186	Pelodiscus_sinensis
ENSACLG00000024674	SRL	58	74.464	ENSPMGG00000021081	srl	98	74.464	Periophthalmus_magnuspinnatus
ENSACLG00000024674	SRL	57	82.637	ENSPMGG00000023505	-	99	82.198	Periophthalmus_magnuspinnatus
ENSACLG00000024674	SRL	57	72.747	ENSPEMG00000015842	Srl	94	72.527	Peromyscus_maniculatus_bairdii
ENSACLG00000024674	SRL	54	67.574	ENSPMAG00000004786	srl	99	63.657	Petromyzon_marinus
ENSACLG00000024674	SRL	57	73.002	ENSPCIG00000012128	SRL	98	73.002	Phascolarctos_cinereus
ENSACLG00000024674	SRL	54	78.500	ENSPFOG00000011408	srl	95	73.263	Poecilia_formosa
ENSACLG00000024674	SRL	99	65.304	ENSPLAG00000002932	SRL	99	84.816	Poecilia_latipinna
ENSACLG00000024674	SRL	55	77.451	ENSPLAG00000008017	srl	99	74.200	Poecilia_latipinna
ENSACLG00000024674	SRL	58	74.946	ENSPMEG00000006745	srl	99	74.200	Poecilia_mexicana
ENSACLG00000024674	SRL	99	65.675	ENSPMEG00000005890	SRL	99	65.174	Poecilia_mexicana
ENSACLG00000024674	SRL	58	74.730	ENSPREG00000007751	srl	99	74.730	Poecilia_reticulata
ENSACLG00000024674	SRL	70	77.990	ENSPREG00000000315	SRL	99	85.249	Poecilia_reticulata
ENSACLG00000024674	SRL	55	72.794	ENSPPYG00000007053	SRL	98	73.611	Pongo_abelii
ENSACLG00000024674	SRL	57	72.588	ENSPCAG00000003378	-	56	67.387	Procavia_capensis
ENSACLG00000024674	SRL	55	73.775	ENSPCOG00000023135	SRL	99	73.576	Propithecus_coquereli
ENSACLG00000024674	SRL	57	72.867	ENSPVAG00000006586	SRL	58	70.186	Pteropus_vampyrus
ENSACLG00000024674	SRL	100	98.758	ENSPNYG00000003423	SRL	100	98.758	Pundamilia_nyererei
ENSACLG00000024674	SRL	58	74.569	ENSPNYG00000001200	srl	99	74.569	Pundamilia_nyererei
ENSACLG00000024674	SRL	61	70.876	ENSPNAG00000023106	srl	99	70.876	Pygocentrus_nattereri
ENSACLG00000024674	SRL	56	77.753	ENSPNAG00000007361	-	91	77.753	Pygocentrus_nattereri
ENSACLG00000024674	SRL	57	72.747	ENSRBIG00000042358	SRL	83	51.953	Rhinopithecus_bieti
ENSACLG00000024674	SRL	57	73.085	ENSSBOG00000029273	SRL	93	73.187	Saimiri_boliviensis_boliviensis
ENSACLG00000024674	SRL	64	68.269	ENSSHAG00000011715	-	58	66.979	Sarcophilus_harrisii
ENSACLG00000024674	SRL	74	75.245	ENSSFOG00015021327	SRL	54	67.308	Scleropages_formosus
ENSACLG00000024674	SRL	57	75.385	ENSSFOG00015009773	srl	94	75.165	Scleropages_formosus
ENSACLG00000024674	SRL	68	87.192	ENSSMAG00000002232	SRL	100	61.530	Scophthalmus_maximus
ENSACLG00000024674	SRL	54	76.750	ENSSMAG00000016274	srl	98	73.536	Scophthalmus_maximus
ENSACLG00000024674	SRL	57	75.219	ENSSDUG00000010808	srl	98	75.219	Seriola_dumerili
ENSACLG00000024674	SRL	57	83.550	ENSSDUG00000009161	SRL	98	83.550	Seriola_dumerili
ENSACLG00000024674	SRL	54	78.250	ENSSLDG00000022024	srl	97	74.620	Seriola_lalandi_dorsalis
ENSACLG00000024674	SRL	57	89.011	ENSSLDG00000014601	SRL	99	89.011	Seriola_lalandi_dorsalis
ENSACLG00000024674	SRL	55	74.201	ENSSPUG00000016859	SRL	98	71.930	Sphenodon_punctatus
ENSACLG00000024674	SRL	58	73.866	ENSSPAG00000019105	srl	95	73.866	Stegastes_partitus
ENSACLG00000024674	SRL	56	85.463	ENSSPAG00000014254	SRL	98	85.463	Stegastes_partitus
ENSACLG00000024674	SRL	59	70.208	ENSSSCG00000007949	SRL	98	73.348	Sus_scrofa
ENSACLG00000024674	SRL	55	75.430	ENSTGUG00000003951	-	97	73.068	Taeniopygia_guttata
ENSACLG00000024674	SRL	64	84.691	ENSTRUG00000013310	SRL	91	84.691	Takifugu_rubripes
ENSACLG00000024674	SRL	58	73.866	ENSTRUG00000006005	srl	96	73.866	Takifugu_rubripes
ENSACLG00000024674	SRL	58	73.650	ENSTNIG00000009739	srl	96	73.650	Tetraodon_nigroviridis
ENSACLG00000024674	SRL	61	68.485	ENSUAMG00000005701	SRL	58	68.485	Ursus_americanus
ENSACLG00000024674	SRL	61	68.485	ENSUMAG00000002574	SRL	58	68.485	Ursus_maritimus
ENSACLG00000024674	SRL	59	70.464	ENSVVUG00000016331	-	51	70.464	Vulpes_vulpes
ENSACLG00000024674	SRL	55	75.735	ENSXETG00000017313	srl	98	73.523	Xenopus_tropicalis
ENSACLG00000024674	SRL	55	77.017	ENSXCOG00000010424	srl	97	76.376	Xiphophorus_couchianus
ENSACLG00000024674	SRL	58	85.529	ENSXCOG00000014584	SRL	99	85.129	Xiphophorus_couchianus
ENSACLG00000024674	SRL	96	65.693	ENSXMAG00000027598	SRL	100	66.369	Xiphophorus_maculatus
ENSACLG00000024674	SRL	58	74.730	ENSXMAG00000004625	srl	91	74.730	Xiphophorus_maculatus