EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000024747 (Gene tree)
Gene ID: 113020333
Gene Symbol: setd1a
Alias: -
Full Name: SET domain containing 1A
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 21776 bases
Position: chr4:5661172-5682947
Accession: 113020333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000036520	RRM_1	PF00076.22	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000037388	-	7348	-	ENSACLP00000036520	2197 (aa)	XP_026019983	UPI000E410BAD

Gene Model

Click here to download ENSACLG00000024747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000024747's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000024747	setd1a	58	67.213	ENSACLG00000016584	setd1ba	52	67.213

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000024747	setd1a	82	98.010	ENSAPOG00000018002	setd1a	79	97.156	Acanthochromis_polyacanthus
ENSACLG00000024747	setd1a	77	91.333	ENSACIG00000007144	setd1a	99	93.417	Amphilophus_citrinellus
ENSACLG00000024747	setd1a	100	87.854	ENSAOCG00000003663	setd1a	100	88.619	Amphiprion_ocellaris
ENSACLG00000024747	setd1a	100	85.907	ENSATEG00000022798	setd1a	100	85.515	Anabas_testudineus
ENSACLG00000024747	setd1a	100	81.301	ENSCSEG00000021605	setd1a	100	80.324	Cynoglossus_semilaevis
ENSACLG00000024747	setd1a	100	81.695	ENSCVAG00000011672	setd1a	100	81.604	Cyprinodon_variegatus
ENSACLG00000024747	setd1a	100	60.683	ENSELUG00000020261	setd1a	72	75.455	Esox_lucius
ENSACLG00000024747	setd1a	89	77.750	ENSFHEG00000023258	setd1a	96	97.368	Fundulus_heteroclitus
ENSACLG00000024747	setd1a	60	91.562	ENSGAFG00000011698	setd1a	80	91.562	Gambusia_affinis
ENSACLG00000024747	setd1a	66	87.248	ENSGACG00000013688	setd1a	83	85.450	Gasterosteus_aculeatus
ENSACLG00000024747	setd1a	56	80.519	ENSGAGG00000010781	-	72	80.519	Gopherus_agassizii
ENSACLG00000024747	setd1a	100	99.272	ENSHBUG00000008893	setd1a	100	99.272	Haplochromis_burtoni
ENSACLG00000024747	setd1a	77	85.511	ENSHCOG00000003119	setd1a	100	85.511	Hippocampus_comes
ENSACLG00000024747	setd1a	100	83.281	ENSKMAG00000009484	setd1a	100	83.928	Kryptolebias_marmoratus
ENSACLG00000024747	setd1a	69	80.822	ENSLBEG00000004399	setd1a	100	83.430	Labrus_bergylta
ENSACLG00000024747	setd1a	71	89.139	ENSMAMG00000021851	setd1a	98	89.139	Mastacembelus_armatus
ENSACLG00000024747	setd1a	100	99.818	ENSMZEG00005023141	setd1a	100	99.818	Maylandia_zebra
ENSACLG00000024747	setd1a	52	82.095	ENSMAUG00000008959	-	65	69.029	Mesocricetus_auratus
ENSACLG00000024747	setd1a	74	87.960	ENSMMOG00000016992	setd1a	99	92.837	Mola_mola
ENSACLG00000024747	setd1a	99	77.793	ENSMALG00000007401	setd1a	98	77.552	Monopterus_albus
ENSACLG00000024747	setd1a	51	81.757	MGP_PahariEiJ_G0013726	-	100	73.096	Mus_pahari
ENSACLG00000024747	setd1a	52	81.757	MGP_SPRETEiJ_G0031633	Setd1a	100	72.589	Mus_spretus
ENSACLG00000024747	setd1a	100	93.282	ENSNBRG00000004760	setd1a	100	93.282	Neolamprologus_brichardi
ENSACLG00000024747	setd1a	100	79.593	ENSORLG00000002213	setd1a	100	80.280	Oryzias_latipes
ENSACLG00000024747	setd1a	100	79.512	ENSORLG00020011897	setd1a	100	80.335	Oryzias_latipes_hni
ENSACLG00000024747	setd1a	100	78.155	ENSORLG00015004826	setd1a	100	80.380	Oryzias_latipes_hsok
ENSACLG00000024747	setd1a	100	79.338	ENSOMEG00000019732	setd1a	100	80.235	Oryzias_melastigma
ENSACLG00000024747	setd1a	52	67.905	ENSOGAG00000028006	-	54	67.905	Otolemur_garnettii
ENSACLG00000024747	setd1a	100	78.255	ENSPFOG00000013669	setd1a	100	77.758	Poecilia_formosa
ENSACLG00000024747	setd1a	100	80.045	ENSPLAG00000009294	setd1a	100	78.914	Poecilia_latipinna
ENSACLG00000024747	setd1a	100	80.154	ENSPMEG00000005864	setd1a	100	79.024	Poecilia_mexicana
ENSACLG00000024747	setd1a	100	79.449	ENSPREG00000010201	setd1a	100	78.546	Poecilia_reticulata
ENSACLG00000024747	setd1a	100	99.045	ENSPNYG00000014139	setd1a	100	99.045	Pundamilia_nyererei
ENSACLG00000024747	setd1a	55	80.546	ENSRBIG00000033047	-	65	77.316	Rhinopithecus_bieti
ENSACLG00000024747	setd1a	53	80.546	ENSRROG00000040062	-	70	80.546	Rhinopithecus_roxellana
ENSACLG00000024747	setd1a	100	83.679	ENSSMAG00000008846	setd1a	100	85.038	Scophthalmus_maximus
ENSACLG00000024747	setd1a	100	88.869	ENSSDUG00000022142	setd1a	100	88.463	Seriola_dumerili
ENSACLG00000024747	setd1a	100	88.734	ENSSLDG00000018250	setd1a	100	88.328	Seriola_lalandi_dorsalis
ENSACLG00000024747	setd1a	100	89.365	ENSSPAG00000007822	setd1a	100	89.455	Stegastes_partitus
ENSACLG00000024747	setd1a	83	80.097	ENSTRUG00000008953	setd1a	99	82.558	Takifugu_rubripes
ENSACLG00000024747	setd1a	50	89.096	ENSTNIG00000014930	setd1a	89	94.737	Tetraodon_nigroviridis
ENSACLG00000024747	setd1a	95	80.453	ENSXCOG00000017585	setd1a	100	74.786	Xiphophorus_couchianus
ENSACLG00000024747	setd1a	100	80.606	ENSXMAG00000008021	setd1a	100	79.892	Xiphophorus_maculatus