EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000024833 (Gene tree)
Gene ID: 113037030
Gene Symbol: scaf4b
Alias: im:6900467|si:ch211-245g11.2
Full Name: splicing factor%2C arginine/serine-rich 15-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 29399 bases
Position: chr14:8306945-8336343
Accession: 113037030
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000036661	RRM_1	PF00076.22	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000037530	-	4173	-	ENSACLP00000036661	749 (aa)	XP_026049523	UPI0003299A34

Gene Model

Click here to download ENSACLG00000024833's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000024833's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000024833	scaf4b	100	77.836	ENSAPOG00000019615	scaf4b	100	79.288	Acanthochromis_polyacanthus
ENSACLG00000024833	scaf4b	67	64.732	ENSAPOG00000002946	scaf4a	50	61.905	Acanthochromis_polyacanthus
ENSACLG00000024833	scaf4b	100	78.968	ENSAOCG00000010433	scaf4b	100	80.291	Amphiprion_ocellaris
ENSACLG00000024833	scaf4b	62	72.093	ENSAOCG00000000615	scaf4a	50	61.905	Amphiprion_ocellaris
ENSACLG00000024833	scaf4b	100	79.101	ENSAPEG00000010913	scaf4b	100	80.423	Amphiprion_percula
ENSACLG00000024833	scaf4b	62	71.512	ENSAPEG00000021229	scaf4a	50	61.508	Amphiprion_percula
ENSACLG00000024833	scaf4b	98	73.797	ENSATEG00000011758	scaf4b	100	74.064	Anabas_testudineus
ENSACLG00000024833	scaf4b	52	60.302	ENSBTAG00000031917	SCAF8	55	40.839	Bos_taurus
ENSACLG00000024833	scaf4b	55	74.051	ENSCJAG00000008993	SCAF4	64	61.733	Callithrix_jacchus
ENSACLG00000024833	scaf4b	53	74.684	ENSCAFG00020026019	SCAF4	67	59.551	Canis_lupus_dingo
ENSACLG00000024833	scaf4b	53	74.051	ENSTSYG00000011344	SCAF4	58	56.654	Carlito_syrichta
ENSACLG00000024833	scaf4b	81	42.047	ENSCPOG00000030311	-	52	42.615	Cavia_porcellus
ENSACLG00000024833	scaf4b	100	62.549	ENSCSEG00000012808	-	99	61.924	Cynoglossus_semilaevis
ENSACLG00000024833	scaf4b	100	69.565	ENSCVAG00000009142	scaf4b	100	69.353	Cyprinodon_variegatus
ENSACLG00000024833	scaf4b	57	62.286	ENSDARG00000018854	scaf4b	64	59.011	Danio_rerio
ENSACLG00000024833	scaf4b	54	59.574	ENSEBUG00000003891	SCAF8	58	50.909	Eptatretus_burgeri
ENSACLG00000024833	scaf4b	100	71.598	ENSFHEG00000007634	scaf4b	100	71.070	Fundulus_heteroclitus
ENSACLG00000024833	scaf4b	57	66.443	ENSGMOG00000015188	scaf4a	60	56.780	Gadus_morhua
ENSACLG00000024833	scaf4b	52	72.143	ENSGACG00000020580	scaf4a	53	60.687	Gasterosteus_aculeatus
ENSACLG00000024833	scaf4b	100	72.823	ENSKMAG00000005742	scaf4b	100	73.219	Kryptolebias_marmoratus
ENSACLG00000024833	scaf4b	92	49.140	ENSLOCG00000009162	scaf4a	65	52.086	Lepisosteus_oculatus
ENSACLG00000024833	scaf4b	55	74.214	ENSLAFG00000010710	SCAF4	51	61.803	Loxodonta_africana
ENSACLG00000024833	scaf4b	61	59.278	ENSMGAG00000012762	SCAF8	55	43.189	Meleagris_gallopavo
ENSACLG00000024833	scaf4b	59	62.105	ENSMODG00000008301	SCAF8	55	42.453	Monodelphis_domestica
ENSACLG00000024833	scaf4b	55	73.418	ENSMODG00000021040	SCAF4	55	56.870	Monodelphis_domestica
ENSACLG00000024833	scaf4b	82	57.194	ENSMALG00000013825	scaf4a	54	59.583	Monopterus_albus
ENSACLG00000024833	scaf4b	60	57.075	ENSONIG00000004687	scaf4a	52	58.621	Oreochromis_niloticus
ENSACLG00000024833	scaf4b	71	75.710	ENSONIG00000005610	scaf4b	99	75.552	Oreochromis_niloticus
ENSACLG00000024833	scaf4b	55	74.051	ENSOCUG00000008336	SCAF4	52	62.362	Oryctolagus_cuniculus
ENSACLG00000024833	scaf4b	100	64.675	ENSORLG00000003420	scaf4b	100	64.675	Oryzias_latipes
ENSACLG00000024833	scaf4b	100	65.252	ENSORLG00020013853	scaf4b	100	65.252	Oryzias_latipes_hni
ENSACLG00000024833	scaf4b	76	53.356	ENSORLG00020011857	scaf4a	69	49.003	Oryzias_latipes_hni
ENSACLG00000024833	scaf4b	51	60.000	ENSOARG00000004159	SCAF8	55	40.510	Ovis_aries
ENSACLG00000024833	scaf4b	57	68.571	ENSPKIG00000022408	scaf4a	100	46.814	Paramormyrops_kingsleyae
ENSACLG00000024833	scaf4b	55	58.273	ENSPMAG00000006192	SCAF8	68	58.333	Petromyzon_marinus
ENSACLG00000024833	scaf4b	54	74.051	ENSPCIG00000028183	SCAF4	51	57.252	Phascolarctos_cinereus
ENSACLG00000024833	scaf4b	83	69.742	ENSPFOG00000003261	scaf4b	80	69.742	Poecilia_formosa
ENSACLG00000024833	scaf4b	100	65.653	ENSPLAG00000004403	-	100	67.174	Poecilia_latipinna
ENSACLG00000024833	scaf4b	100	65.653	ENSPMEG00000006666	-	100	67.174	Poecilia_mexicana
ENSACLG00000024833	scaf4b	100	65.443	ENSPREG00000013510	scaf4b	100	66.456	Poecilia_reticulata
ENSACLG00000024833	scaf4b	55	74.051	ENSPCOG00000018710	SCAF4	53	61.303	Propithecus_coquereli
ENSACLG00000024833	scaf4b	100	99.466	ENSPNYG00000010526	scaf4b	100	99.466	Pundamilia_nyererei
ENSACLG00000024833	scaf4b	69	71.975	ENSPNAG00000015199	-	61	71.975	Pygocentrus_nattereri
ENSACLG00000024833	scaf4b	55	75.316	ENSRNOG00000002104	Scaf4	56	64.504	Rattus_norvegicus
ENSACLG00000024833	scaf4b	55	74.051	ENSSHAG00000001581	SCAF4	56	57.252	Sarcophilus_harrisii
ENSACLG00000024833	scaf4b	63	41.432	ENSSFOG00015006338	scaf4a	61	40.652	Scleropages_formosus
ENSACLG00000024833	scaf4b	100	74.147	ENSSMAG00000003738	scaf4b	100	74.016	Scophthalmus_maximus
ENSACLG00000024833	scaf4b	100	77.428	ENSSDUG00000012380	scaf4b	100	77.428	Seriola_dumerili
ENSACLG00000024833	scaf4b	100	77.297	ENSSLDG00000023152	-	100	77.297	Seriola_lalandi_dorsalis
ENSACLG00000024833	scaf4b	100	62.000	ENSTRUG00000009536	-	100	61.867	Takifugu_rubripes
ENSACLG00000024833	scaf4b	62	60.302	ENSTNIG00000016885	SCAF8	53	53.047	Tetraodon_nigroviridis
ENSACLG00000024833	scaf4b	52	75.974	ENSUMAG00000016962	SCAF4	51	62.753	Ursus_maritimus
ENSACLG00000024833	scaf4b	50	60.317	ENSVPAG00000012465	SCAF8	55	54.098	Vicugna_pacos
ENSACLG00000024833	scaf4b	60	65.641	ENSXETG00000007351	scaf4	50	61.429	Xenopus_tropicalis