EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000025024 (Gene tree)
Gene ID: 113026879
Gene Symbol: rbm28
Alias: zgc:56258
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 14089 bases
Position: chr7:58453033-58467121
Accession: 113026879
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000036950	RRM_1	PF00076.22	7.2e-60	1	3
ENSACLP00000036950	RRM_1	PF00076.22	7.2e-60	2	3
ENSACLP00000036950	RRM_1	PF00076.22	7.2e-60	3	3
ENSACLP00000036935	RRM_1	PF00076.22	9e-60	1	3
ENSACLP00000036935	RRM_1	PF00076.22	9e-60	2	3
ENSACLP00000036935	RRM_1	PF00076.22	9e-60	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000037816	-	2668	-	ENSACLP00000036935	787 (aa)	-	-
ENSACLT00000037829	-	2587	-	ENSACLP00000036950	760 (aa)	XP_026031900	UPI000E417694

Gene Model

Click here to download ENSACLG00000025024's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000025024's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000025024	rbm28	100	48.730	ENSG00000106344	RBM28	100	52.632	Homo_sapiens
ENSACLG00000025024	rbm28	58	76.072	ENSAPOG00000015512	rbm28	100	71.759	Acanthochromis_polyacanthus
ENSACLG00000025024	rbm28	97	58.621	ENSAMEG00000004776	RBM28	100	48.578	Ailuropoda_melanoleuca
ENSACLG00000025024	rbm28	56	84.848	ENSACIG00000023153	rbm28	98	79.536	Amphilophus_citrinellus
ENSACLG00000025024	rbm28	58	76.524	ENSAOCG00000000462	rbm28	100	73.022	Amphiprion_ocellaris
ENSACLG00000025024	rbm28	58	76.298	ENSAPEG00000012996	rbm28	100	73.472	Amphiprion_percula
ENSACLG00000025024	rbm28	100	50.644	ENSANAG00000033922	RBM28	100	52.632	Aotus_nancymaae
ENSACLG00000025024	rbm28	58	60.714	ENSAMXG00000000763	rbm28	99	58.425	Astyanax_mexicanus
ENSACLG00000025024	rbm28	66	56.152	ENSBTAG00000017001	RBM28	100	52.632	Bos_taurus
ENSACLG00000025024	rbm28	100	50.383	ENSCJAG00000017731	RBM28	100	52.632	Callithrix_jacchus
ENSACLG00000025024	rbm28	100	51.160	ENSCAFG00000001667	RBM28	100	49.619	Canis_familiaris
ENSACLG00000025024	rbm28	100	51.160	ENSCAFG00020021648	RBM28	100	49.619	Canis_lupus_dingo
ENSACLG00000025024	rbm28	100	51.588	ENSCHIG00000014146	RBM28	100	51.450	Capra_hircus
ENSACLG00000025024	rbm28	88	54.626	ENSTSYG00000002892	RBM28	100	66.667	Carlito_syrichta
ENSACLG00000025024	rbm28	79	39.677	ENSCAPG00000013218	RBM28	89	39.897	Cavia_aperea
ENSACLG00000025024	rbm28	63	54.601	ENSCPOG00000006253	RBM28	100	50.000	Cavia_porcellus
ENSACLG00000025024	rbm28	71	52.632	ENSCCAG00000035105	RBM28	100	52.632	Cebus_capucinus
ENSACLG00000025024	rbm28	100	49.193	ENSCATG00000040497	RBM28	100	52.632	Cercocebus_atys
ENSACLG00000025024	rbm28	100	45.455	ENSCLAG00000003707	RBM28	100	47.547	Chinchilla_lanigera
ENSACLG00000025024	rbm28	65	52.906	ENSCSAG00000010161	RBM28	60	52.542	Chlorocebus_sabaeus
ENSACLG00000025024	rbm28	57	58.065	ENSCHOG00000001994	-	63	54.839	Choloepus_hoffmanni
ENSACLG00000025024	rbm28	51	50.922	ENSCPBG00000018088	RBM28	81	50.461	Chrysemys_picta_bellii
ENSACLG00000025024	rbm28	58	59.109	ENSCANG00000038397	RBM28	95	52.091	Colobus_angolensis_palliatus
ENSACLG00000025024	rbm28	65	53.924	ENSCGRG00001021278	Rbm28	100	50.441	Cricetulus_griseus_chok1gshd
ENSACLG00000025024	rbm28	100	50.641	ENSCGRG00000005098	Rbm28	100	47.445	Cricetulus_griseus_crigri
ENSACLG00000025024	rbm28	100	64.005	ENSCSEG00000004212	rbm28	100	63.589	Cynoglossus_semilaevis
ENSACLG00000025024	rbm28	59	76.821	ENSCVAG00000010493	rbm28	99	66.580	Cyprinodon_variegatus
ENSACLG00000025024	rbm28	89	60.225	ENSDARG00000025332	rbm28	100	54.505	Danio_rerio
ENSACLG00000025024	rbm28	100	50.644	ENSDNOG00000001124	RBM28	100	49.874	Dasypus_novemcinctus
ENSACLG00000025024	rbm28	66	51.663	ENSDORG00000004184	Rbm28	94	51.619	Dipodomys_ordii
ENSACLG00000025024	rbm28	63	40.041	FBgn0260456	CG4806	67	38.493	Drosophila_melanogaster
ENSACLG00000025024	rbm28	100	43.116	ENSETEG00000007130	RBM28	56	51.259	Echinops_telfairi
ENSACLG00000025024	rbm28	87	45.249	ENSEBUG00000004419	rbm28	99	40.026	Eptatretus_burgeri
ENSACLG00000025024	rbm28	65	53.479	ENSEASG00005008528	RBM28	100	49.490	Equus_asinus_asinus
ENSACLG00000025024	rbm28	65	53.280	ENSECAG00000007745	RBM28	100	49.362	Equus_caballus
ENSACLG00000025024	rbm28	100	48.276	ENSEEUG00000002389	RBM28	100	48.196	Erinaceus_europaeus
ENSACLG00000025024	rbm28	100	59.339	ENSELUG00000020602	rbm28	100	57.935	Esox_lucius
ENSACLG00000025024	rbm28	100	50.765	ENSFCAG00000000946	RBM28	100	52.632	Felis_catus
ENSACLG00000025024	rbm28	100	50.960	ENSFDAG00000010169	RBM28	100	50.000	Fukomys_damarensis
ENSACLG00000025024	rbm28	88	61.333	ENSGMOG00000007091	rbm28	99	54.427	Gadus_morhua
ENSACLG00000025024	rbm28	60	73.407	ENSGAFG00000004802	rbm28	98	72.967	Gambusia_affinis
ENSACLG00000025024	rbm28	58	75.281	ENSGACG00000012612	rbm28	100	67.710	Gasterosteus_aculeatus
ENSACLG00000025024	rbm28	77	63.102	ENSGAGG00000008873	RBM28	83	63.102	Gopherus_agassizii
ENSACLG00000025024	rbm28	95	48.450	ENSGGOG00000004644	RBM28	97	48.794	Gorilla_gorilla
ENSACLG00000025024	rbm28	95	98.752	ENSHBUG00000009611	rbm28	99	98.752	Haplochromis_burtoni
ENSACLG00000025024	rbm28	100	51.584	ENSHGLG00000005409	RBM28	100	50.127	Heterocephalus_glaber_female
ENSACLG00000025024	rbm28	100	51.584	ENSHGLG00100016458	RBM28	100	50.127	Heterocephalus_glaber_male
ENSACLG00000025024	rbm28	83	55.556	ENSHCOG00000010597	rbm28	90	56.085	Hippocampus_comes
ENSACLG00000025024	rbm28	57	48.157	ENSIPUG00000007103	rbm28	92	45.702	Ictalurus_punctatus
ENSACLG00000025024	rbm28	66	53.831	ENSSTOG00000002169	RBM28	100	49.015	Ictidomys_tridecemlineatus
ENSACLG00000025024	rbm28	56	54.756	ENSJJAG00000022400	Rbm28	59	54.378	Jaculus_jaculus
ENSACLG00000025024	rbm28	59	72.727	ENSKMAG00000013348	rbm28	99	66.235	Kryptolebias_marmoratus
ENSACLG00000025024	rbm28	59	72.907	ENSLBEG00000012998	rbm28	100	66.285	Labrus_bergylta
ENSACLG00000025024	rbm28	73	47.538	ENSLACG00000010485	-	99	49.215	Latimeria_chalumnae
ENSACLG00000025024	rbm28	100	59.694	ENSLOCG00000015541	rbm28	78	61.734	Lepisosteus_oculatus
ENSACLG00000025024	rbm28	100	51.269	ENSLAFG00000010717	RBM28	100	49.936	Loxodonta_africana
ENSACLG00000025024	rbm28	91	53.509	ENSMFAG00000031036	RBM28	100	52.632	Macaca_fascicularis
ENSACLG00000025024	rbm28	91	53.509	ENSMMUG00000007250	RBM28	100	52.632	Macaca_mulatta
ENSACLG00000025024	rbm28	100	51.432	ENSMNEG00000036970	RBM28	100	52.632	Macaca_nemestrina
ENSACLG00000025024	rbm28	70	59.162	ENSMLEG00000037717	RBM28	94	47.327	Mandrillus_leucophaeus
ENSACLG00000025024	rbm28	100	69.191	ENSMAMG00000008525	rbm28	100	68.855	Mastacembelus_armatus
ENSACLG00000025024	rbm28	93	99.717	ENSMZEG00005019625	rbm28	100	99.717	Maylandia_zebra
ENSACLG00000025024	rbm28	65	54.545	ENSMAUG00000002263	Rbm28	100	50.824	Mesocricetus_auratus
ENSACLG00000025024	rbm28	66	51.052	ENSMICG00000000107	RBM28	100	48.583	Microcebus_murinus
ENSACLG00000025024	rbm28	100	51.302	ENSMOCG00000014615	Rbm28	100	51.023	Microtus_ochrogaster
ENSACLG00000025024	rbm28	59	65.188	ENSMMOG00000008600	rbm28	98	61.875	Mola_mola
ENSACLG00000025024	rbm28	100	48.920	ENSMODG00000015151	RBM28	100	48.424	Monodelphis_domestica
ENSACLG00000025024	rbm28	59	75.991	ENSMALG00000006419	rbm28	100	68.293	Monopterus_albus
ENSACLG00000025024	rbm28	100	48.568	MGP_CAROLIEiJ_G0028162	Rbm28	100	49.937	Mus_caroli
ENSACLG00000025024	rbm28	100	50.891	ENSMUSG00000029701	Rbm28	100	50.317	Mus_musculus
ENSACLG00000025024	rbm28	100	50.320	MGP_PahariEiJ_G0021920	Rbm28	100	49.558	Mus_pahari
ENSACLG00000025024	rbm28	100	50.636	MGP_SPRETEiJ_G0029162	Rbm28	100	50.317	Mus_spretus
ENSACLG00000025024	rbm28	100	52.903	ENSMPUG00000006511	RBM28	100	50.633	Mustela_putorius_furo
ENSACLG00000025024	rbm28	64	52.727	ENSMLUG00000002186	RBM28	100	49.488	Myotis_lucifugus
ENSACLG00000025024	rbm28	100	50.958	ENSNGAG00000006480	-	100	50.065	Nannospalax_galili
ENSACLG00000025024	rbm28	100	49.681	ENSNGAG00000017946	-	100	48.338	Nannospalax_galili
ENSACLG00000025024	rbm28	92	54.386	ENSNLEG00000012307	RBM28	100	52.632	Nomascus_leucogenys
ENSACLG00000025024	rbm28	81	61.635	ENSMEUG00000009611	RBM28	88	61.635	Notamacropus_eugenii
ENSACLG00000025024	rbm28	100	48.508	ENSODEG00000003213	-	100	47.044	Octodon_degus
ENSACLG00000025024	rbm28	73	58.400	ENSODEG00000013217	-	79	57.219	Octodon_degus
ENSACLG00000025024	rbm28	100	95.213	ENSONIG00000014924	rbm28	100	95.213	Oreochromis_niloticus
ENSACLG00000025024	rbm28	100	48.416	ENSOANG00000000815	-	63	49.489	Ornithorhynchus_anatinus
ENSACLG00000025024	rbm28	64	54.435	ENSOCUG00000003009	RBM28	100	49.748	Oryctolagus_cuniculus
ENSACLG00000025024	rbm28	99	67.273	ENSORLG00000009636	rbm28	99	65.847	Oryzias_latipes
ENSACLG00000025024	rbm28	59	74.393	ENSORLG00020002123	rbm28	99	66.016	Oryzias_latipes_hni
ENSACLG00000025024	rbm28	86	71.366	ENSORLG00015015030	rbm28	98	72.195	Oryzias_latipes_hsok
ENSACLG00000025024	rbm28	59	76.044	ENSOMEG00000007801	rbm28	100	69.935	Oryzias_melastigma
ENSACLG00000025024	rbm28	73	53.707	ENSOGAG00000006011	RBM28	100	50.877	Otolemur_garnettii
ENSACLG00000025024	rbm28	100	51.828	ENSOARG00000002547	RBM28	100	50.252	Ovis_aries
ENSACLG00000025024	rbm28	100	48.702	ENSPPAG00000041730	RBM28	100	52.632	Pan_paniscus
ENSACLG00000025024	rbm28	100	50.381	ENSPPRG00000004420	RBM28	100	52.632	Panthera_pardus
ENSACLG00000025024	rbm28	100	50.508	ENSPTIG00000008550	RBM28	100	52.632	Panthera_tigris_altaica
ENSACLG00000025024	rbm28	100	48.826	ENSPTRG00000019659	RBM28	100	52.632	Pan_troglodytes
ENSACLG00000025024	rbm28	100	48.335	ENSPANG00000022295	RBM28	100	52.632	Papio_anubis
ENSACLG00000025024	rbm28	99	54.827	ENSPKIG00000023453	rbm28	99	53.695	Paramormyrops_kingsleyae
ENSACLG00000025024	rbm28	100	58.421	ENSPMGG00000012840	rbm28	100	58.553	Periophthalmus_magnuspinnatus
ENSACLG00000025024	rbm28	100	51.108	ENSPEMG00000020673	Rbm28	100	50.065	Peromyscus_maniculatus_bairdii
ENSACLG00000025024	rbm28	100	49.098	ENSPCIG00000012810	RBM28	100	49.040	Phascolarctos_cinereus
ENSACLG00000025024	rbm28	59	73.289	ENSPFOG00000018209	rbm28	100	64.295	Poecilia_formosa
ENSACLG00000025024	rbm28	59	72.707	ENSPLAG00000016078	rbm28	96	64.146	Poecilia_latipinna
ENSACLG00000025024	rbm28	59	72.848	ENSPMEG00000004292	rbm28	100	64.036	Poecilia_mexicana
ENSACLG00000025024	rbm28	59	71.523	ENSPREG00000014287	rbm28	99	63.472	Poecilia_reticulata
ENSACLG00000025024	rbm28	100	49.504	ENSPPYG00000017975	RBM28	100	50.128	Pongo_abelii
ENSACLG00000025024	rbm28	75	50.416	ENSPCAG00000008223	RBM28	83	50.543	Procavia_capensis
ENSACLG00000025024	rbm28	74	52.632	ENSPCOG00000016797	RBM28	100	52.632	Propithecus_coquereli
ENSACLG00000025024	rbm28	73	62.736	ENSPVAG00000005443	RBM28	71	62.736	Pteropus_vampyrus
ENSACLG00000025024	rbm28	100	98.947	ENSPNYG00000014003	rbm28	100	98.947	Pundamilia_nyererei
ENSACLG00000025024	rbm28	100	49.873	ENSRNOG00000005468	Rbm28	100	49.242	Rattus_norvegicus
ENSACLG00000025024	rbm28	91	54.386	ENSRBIG00000033990	RBM28	100	52.632	Rhinopithecus_bieti
ENSACLG00000025024	rbm28	91	54.386	ENSRROG00000040747	RBM28	100	52.632	Rhinopithecus_roxellana
ENSACLG00000025024	rbm28	86	47.396	ENSSBOG00000012308	RBM28	100	47.917	Saimiri_boliviensis_boliviensis
ENSACLG00000025024	rbm28	96	47.299	ENSSHAG00000017017	RBM28	97	47.554	Sarcophilus_harrisii
ENSACLG00000025024	rbm28	58	61.247	ENSSFOG00015001231	rbm28	100	54.830	Scleropages_formosus
ENSACLG00000025024	rbm28	59	67.763	ENSSMAG00000003885	rbm28	95	64.570	Scophthalmus_maximus
ENSACLG00000025024	rbm28	59	79.515	ENSSDUG00000014270	rbm28	92	77.542	Seriola_dumerili
ENSACLG00000025024	rbm28	100	69.716	ENSSLDG00000020099	rbm28	100	70.103	Seriola_lalandi_dorsalis
ENSACLG00000025024	rbm28	73	59.677	ENSSARG00000008303	RBM28	76	59.730	Sorex_araneus
ENSACLG00000025024	rbm28	67	60.294	ENSSPUG00000000838	RBM28	80	60.294	Sphenodon_punctatus
ENSACLG00000025024	rbm28	58	76.682	ENSSPAG00000023305	rbm28	100	70.274	Stegastes_partitus
ENSACLG00000025024	rbm28	100	51.955	ENSSSCG00000031847	RBM28	100	50.763	Sus_scrofa
ENSACLG00000025024	rbm28	100	61.705	ENSTRUG00000013311	rbm28	99	62.677	Takifugu_rubripes
ENSACLG00000025024	rbm28	99	61.460	ENSTNIG00000017962	rbm28	62	67.230	Tetraodon_nigroviridis
ENSACLG00000025024	rbm28	82	54.574	ENSTBEG00000012749	RBM28	72	54.313	Tupaia_belangeri
ENSACLG00000025024	rbm28	100	48.119	ENSUAMG00000006949	RBM28	100	47.296	Ursus_americanus
ENSACLG00000025024	rbm28	100	51.421	ENSUMAG00000005997	RBM28	100	49.621	Ursus_maritimus
ENSACLG00000025024	rbm28	85	48.554	ENSVPAG00000008304	RBM28	85	47.189	Vicugna_pacos
ENSACLG00000025024	rbm28	100	51.044	ENSVVUG00000007270	RBM28	100	49.682	Vulpes_vulpes
ENSACLG00000025024	rbm28	99	47.170	ENSXETG00000009271	rbm28	99	48.936	Xenopus_tropicalis
ENSACLG00000025024	rbm28	59	68.653	ENSXCOG00000020357	rbm28	98	66.250	Xiphophorus_couchianus
ENSACLG00000025024	rbm28	99	65.526	ENSXMAG00000004415	rbm28	99	65.046	Xiphophorus_maculatus