EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000025113 (Gene tree)
Gene ID: 113020340
Gene Symbol: ddx42
Alias: im:7148194|si:dkey-15n1.10|zgc:111815
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 6731 bases
Position: chr4:5798201-5804931
Accession: 113020340
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000037124	ResIII	PF04851.15	8.3e-07	1	1
ENSACLP00000037157	ResIII	PF04851.15	1.4e-06	1	1
ENSACLP00000037157	DEAD	PF00270.29	3.6e-48	1	1
ENSACLP00000037124	DEAD	PF00270.29	3.7e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000038037	-	2688	-	ENSACLP00000037157	895 (aa)	-	-
ENSACLT00000038006	-	3835	-	ENSACLP00000037124	909 (aa)	XP_026019997	UPI000329B4FB

Gene Model

Click here to download ENSACLG00000025113's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000025113's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000025113	ddx42	50	37.053	ENSACLG00000003774	-	69	36.255
ENSACLG00000025113	ddx42	51	36.688	ENSACLG00000013517	-	76	35.991
ENSACLG00000025113	ddx42	62	41.075	ENSACLG00000014804	ddx46	61	40.536

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000025113	ddx42	99	72.135	ENSG00000198231	DDX42	100	77.143	Homo_sapiens
ENSACLG00000025113	ddx42	91	93.614	ENSAPOG00000017675	ddx42	93	93.855	Acanthochromis_polyacanthus
ENSACLG00000025113	ddx42	99	72.479	ENSAMEG00000003200	DDX42	89	77.180	Ailuropoda_melanoleuca
ENSACLG00000025113	ddx42	84	96.615	ENSACIG00000007376	ddx42	90	97.238	Amphilophus_citrinellus
ENSACLG00000025113	ddx42	100	88.553	ENSAOCG00000003520	ddx42	90	93.750	Amphiprion_ocellaris
ENSACLG00000025113	ddx42	100	90.860	ENSAPEG00000000984	ddx42	91	93.502	Amphiprion_percula
ENSACLG00000025113	ddx42	100	90.949	ENSATEG00000022920	ddx42	100	90.731	Anabas_testudineus
ENSACLG00000025113	ddx42	99	72.999	ENSAPLG00000010544	DDX42	91	76.207	Anas_platyrhynchos
ENSACLG00000025113	ddx42	99	73.448	ENSACAG00000003994	DDX42	90	75.976	Anolis_carolinensis
ENSACLG00000025113	ddx42	99	73.248	ENSANAG00000035693	DDX42	99	77.247	Aotus_nancymaae
ENSACLG00000025113	ddx42	97	75.108	ENSAMXG00000011435	ddx42	89	80.947	Astyanax_mexicanus
ENSACLG00000025113	ddx42	99	72.293	ENSBTAG00000021058	DDX42	92	80.602	Bos_taurus
ENSACLG00000025113	ddx42	66	53.931	WBGene00008119	C46F11.4	69	58.230	Caenorhabditis_elegans
ENSACLG00000025113	ddx42	99	73.355	ENSCJAG00000019649	DDX42	99	80.928	Callithrix_jacchus
ENSACLG00000025113	ddx42	99	72.833	ENSCAFG00000012818	DDX42	89	77.180	Canis_familiaris
ENSACLG00000025113	ddx42	99	72.833	ENSCAFG00020026631	DDX42	89	77.180	Canis_lupus_dingo
ENSACLG00000025113	ddx42	99	73.763	ENSCHIG00000014431	DDX42	93	76.733	Capra_hircus
ENSACLG00000025113	ddx42	100	71.354	ENSTSYG00000001380	DDX42	90	75.976	Carlito_syrichta
ENSACLG00000025113	ddx42	73	60.997	ENSCAPG00000013621	DDX42	94	60.997	Cavia_aperea
ENSACLG00000025113	ddx42	99	72.824	ENSCPOG00000005633	DDX42	99	71.888	Cavia_porcellus
ENSACLG00000025113	ddx42	99	68.605	ENSCCAG00000020612	DDX42	97	77.857	Cebus_capucinus
ENSACLG00000025113	ddx42	99	73.106	ENSCATG00000030490	DDX42	92	75.610	Cercocebus_atys
ENSACLG00000025113	ddx42	99	73.383	ENSCLAG00000003497	DDX42	91	76.415	Chinchilla_lanigera
ENSACLG00000025113	ddx42	99	68.017	ENSCSAG00000003914	DDX42	89	73.603	Chlorocebus_sabaeus
ENSACLG00000025113	ddx42	63	85.714	ENSCHOG00000006241	DDX42	61	87.273	Choloepus_hoffmanni
ENSACLG00000025113	ddx42	99	74.241	ENSCPBG00000026682	DDX42	90	76.842	Chrysemys_picta_bellii
ENSACLG00000025113	ddx42	50	67.640	ENSCING00000001837	-	96	67.191	Ciona_intestinalis
ENSACLG00000025113	ddx42	99	73.106	ENSCANG00000034663	DDX42	95	80.896	Colobus_angolensis_palliatus
ENSACLG00000025113	ddx42	99	72.216	ENSCGRG00001009775	Ddx42	89	77.116	Cricetulus_griseus_chok1gshd
ENSACLG00000025113	ddx42	99	72.216	ENSCGRG00000011718	Ddx42	89	77.116	Cricetulus_griseus_crigri
ENSACLG00000025113	ddx42	100	87.432	ENSCSEG00000021574	ddx42	91	88.675	Cynoglossus_semilaevis
ENSACLG00000025113	ddx42	100	87.157	ENSCVAG00000011404	ddx42	100	86.937	Cyprinodon_variegatus
ENSACLG00000025113	ddx42	100	79.679	ENSDARG00000037928	ddx42	92	81.915	Danio_rerio
ENSACLG00000025113	ddx42	99	70.117	ENSDNOG00000007961	DDX42	90	74.344	Dasypus_novemcinctus
ENSACLG00000025113	ddx42	99	66.702	ENSDORG00000004199	Ddx42	90	69.204	Dipodomys_ordii
ENSACLG00000025113	ddx42	67	60.356	FBgn0036104	CG6418	84	57.612	Drosophila_melanogaster
ENSACLG00000025113	ddx42	85	72.983	ENSEBUG00000001155	ddx42	93	72.215	Eptatretus_burgeri
ENSACLG00000025113	ddx42	100	72.958	ENSEASG00005013089	DDX42	99	78.063	Equus_asinus_asinus
ENSACLG00000025113	ddx42	99	72.611	ENSECAG00000022684	DDX42	89	76.941	Equus_caballus
ENSACLG00000025113	ddx42	60	89.189	ENSEEUG00000009144	DDX42	73	94.286	Erinaceus_europaeus
ENSACLG00000025113	ddx42	100	80.871	ENSELUG00000020593	ddx42	91	84.024	Esox_lucius
ENSACLG00000025113	ddx42	99	72.051	ENSFCAG00000003499	DDX42	89	77.300	Felis_catus
ENSACLG00000025113	ddx42	98	71.913	ENSFALG00000004675	DDX42	74	76.407	Ficedula_albicollis
ENSACLG00000025113	ddx42	99	72.439	ENSFDAG00000020516	DDX42	90	76.769	Fukomys_damarensis
ENSACLG00000025113	ddx42	100	86.718	ENSFHEG00000023290	ddx42	100	87.047	Fundulus_heteroclitus
ENSACLG00000025113	ddx42	78	84.605	ENSGMOG00000004595	ddx42	79	84.040	Gadus_morhua
ENSACLG00000025113	ddx42	99	71.473	ENSGALG00000000581	DDX42	84	79.297	Gallus_gallus
ENSACLG00000025113	ddx42	95	87.384	ENSGAFG00000011846	ddx42	91	89.290	Gambusia_affinis
ENSACLG00000025113	ddx42	100	82.860	ENSGACG00000009782	ddx42	94	84.569	Gasterosteus_aculeatus
ENSACLG00000025113	ddx42	99	73.795	ENSGAGG00000024411	DDX42	89	76.230	Gopherus_agassizii
ENSACLG00000025113	ddx42	99	72.921	ENSGGOG00000006779	DDX42	97	78.031	Gorilla_gorilla
ENSACLG00000025113	ddx42	100	99.450	ENSHBUG00000008705	ddx42	100	99.450	Haplochromis_burtoni
ENSACLG00000025113	ddx42	99	70.766	ENSHGLG00000010024	DDX42	90	72.902	Heterocephalus_glaber_female
ENSACLG00000025113	ddx42	99	72.727	ENSHGLG00100004479	-	89	76.822	Heterocephalus_glaber_male
ENSACLG00000025113	ddx42	89	57.247	ENSHGLG00100007138	-	84	59.014	Heterocephalus_glaber_male
ENSACLG00000025113	ddx42	100	79.386	ENSHCOG00000003357	ddx42	100	78.289	Hippocampus_comes
ENSACLG00000025113	ddx42	100	79.045	ENSIPUG00000013327	ddx42	93	82.277	Ictalurus_punctatus
ENSACLG00000025113	ddx42	99	72.881	ENSSTOG00000008922	DDX42	90	76.325	Ictidomys_tridecemlineatus
ENSACLG00000025113	ddx42	99	73.504	ENSJJAG00000011727	Ddx42	91	76.631	Jaculus_jaculus
ENSACLG00000025113	ddx42	100	88.974	ENSKMAG00000009914	ddx42	100	82.873	Kryptolebias_marmoratus
ENSACLG00000025113	ddx42	100	79.185	ENSLBEG00000004687	ddx42	90	82.482	Labrus_bergylta
ENSACLG00000025113	ddx42	99	73.205	ENSLACG00000013476	DDX42	90	78.121	Latimeria_chalumnae
ENSACLG00000025113	ddx42	100	81.365	ENSLOCG00000011764	ddx42	90	83.373	Lepisosteus_oculatus
ENSACLG00000025113	ddx42	99	72.497	ENSLAFG00000003249	DDX42	91	76.491	Loxodonta_africana
ENSACLG00000025113	ddx42	99	73.106	ENSMFAG00000031356	DDX42	92	75.726	Macaca_fascicularis
ENSACLG00000025113	ddx42	99	73.291	ENSMMUG00000016762	DDX42	96	77.809	Macaca_mulatta
ENSACLG00000025113	ddx42	99	73.106	ENSMNEG00000038250	DDX42	87	80.810	Macaca_nemestrina
ENSACLG00000025113	ddx42	99	71.190	ENSMLEG00000043080	DDX42	88	77.392	Mandrillus_leucophaeus
ENSACLG00000025113	ddx42	91	93.124	ENSMAMG00000021888	ddx42	88	92.400	Mastacembelus_armatus
ENSACLG00000025113	ddx42	100	100.000	ENSMZEG00005023103	ddx42	100	100.000	Maylandia_zebra
ENSACLG00000025113	ddx42	99	71.444	ENSMGAG00000001822	DDX42	89	76.331	Meleagris_gallopavo
ENSACLG00000025113	ddx42	79	77.361	ENSMAUG00000020774	-	94	77.528	Mesocricetus_auratus
ENSACLG00000025113	ddx42	99	72.795	ENSMICG00000009952	DDX42	91	76.061	Microcebus_murinus
ENSACLG00000025113	ddx42	99	73.312	ENSMOCG00000015504	Ddx42	90	77.061	Microtus_ochrogaster
ENSACLG00000025113	ddx42	93	84.970	ENSMMOG00000016963	ddx42	85	86.203	Mola_mola
ENSACLG00000025113	ddx42	51	84.255	ENSMODG00000009917	-	98	84.435	Monodelphis_domestica
ENSACLG00000025113	ddx42	100	90.979	ENSMALG00000007800	ddx42	100	90.539	Monopterus_albus
ENSACLG00000025113	ddx42	99	72.098	MGP_CAROLIEiJ_G0017314	Ddx42	89	77.300	Mus_caroli
ENSACLG00000025113	ddx42	99	72.641	ENSMUSG00000020705	Ddx42	89	76.941	Mus_musculus
ENSACLG00000025113	ddx42	76	83.792	MGP_PahariEiJ_G0018444	-	95	85.693	Mus_pahari
ENSACLG00000025113	ddx42	99	71.991	MGP_SPRETEiJ_G0018158	Ddx42	89	77.061	Mus_spretus
ENSACLG00000025113	ddx42	99	71.911	ENSMPUG00000014921	DDX42	88	77.300	Mustela_putorius_furo
ENSACLG00000025113	ddx42	99	70.504	ENSMLUG00000011645	DDX42	88	76.478	Myotis_lucifugus
ENSACLG00000025113	ddx42	99	73.561	ENSNGAG00000021897	Ddx42	99	72.121	Nannospalax_galili
ENSACLG00000025113	ddx42	100	99.106	ENSNBRG00000004466	ddx42	100	99.106	Neolamprologus_brichardi
ENSACLG00000025113	ddx42	99	73.241	ENSNLEG00000004248	DDX42	99	78.174	Nomascus_leucogenys
ENSACLG00000025113	ddx42	76	71.331	ENSMEUG00000013227	-	71	70.819	Notamacropus_eugenii
ENSACLG00000025113	ddx42	99	71.898	ENSOPRG00000014960	DDX42	89	77.153	Ochotona_princeps
ENSACLG00000025113	ddx42	99	69.851	ENSODEG00000007810	DDX42	90	72.759	Octodon_degus
ENSACLG00000025113	ddx42	100	98.680	ENSONIG00000000734	ddx42	100	98.680	Oreochromis_niloticus
ENSACLG00000025113	ddx42	59	83.148	ENSOANG00000000265	DDX42	100	83.148	Ornithorhynchus_anatinus
ENSACLG00000025113	ddx42	99	72.747	ENSOCUG00000004304	DDX42	82	76.703	Oryctolagus_cuniculus
ENSACLG00000025113	ddx42	100	87.789	ENSORLG00000002395	ddx42	91	89.080	Oryzias_latipes
ENSACLG00000025113	ddx42	100	89.549	ENSORLG00020011621	ddx42	100	86.909	Oryzias_latipes_hni
ENSACLG00000025113	ddx42	100	89.219	ENSORLG00015004487	ddx42	100	86.703	Oryzias_latipes_hsok
ENSACLG00000025113	ddx42	100	88.681	ENSOMEG00000020093	ddx42	100	87.569	Oryzias_melastigma
ENSACLG00000025113	ddx42	99	72.526	ENSOGAG00000006872	DDX42	89	77.014	Otolemur_garnettii
ENSACLG00000025113	ddx42	99	72.013	ENSOARG00000013540	DDX42	88	77.327	Ovis_aries
ENSACLG00000025113	ddx42	99	73.028	ENSPPAG00000007496	DDX42	97	78.305	Pan_paniscus
ENSACLG00000025113	ddx42	99	71.945	ENSPPRG00000002740	DDX42	89	77.180	Panthera_pardus
ENSACLG00000025113	ddx42	99	71.039	ENSPTIG00000009932	DDX42	89	77.180	Panthera_tigris_altaica
ENSACLG00000025113	ddx42	99	73.028	ENSPTRG00000009523	DDX42	97	78.305	Pan_troglodytes
ENSACLG00000025113	ddx42	99	73.212	ENSPANG00000020990	DDX42	92	76.999	Papio_anubis
ENSACLG00000025113	ddx42	100	78.233	ENSPKIG00000002901	ddx42	96	81.360	Paramormyrops_kingsleyae
ENSACLG00000025113	ddx42	85	80.076	ENSPSIG00000010289	DDX42	95	79.695	Pelodiscus_sinensis
ENSACLG00000025113	ddx42	100	80.311	ENSPMGG00000009323	ddx42	92	84.783	Periophthalmus_magnuspinnatus
ENSACLG00000025113	ddx42	99	72.775	ENSPEMG00000006755	Ddx42	89	77.419	Peromyscus_maniculatus_bairdii
ENSACLG00000025113	ddx42	82	72.526	ENSPMAG00000005580	ddx42	99	72.157	Petromyzon_marinus
ENSACLG00000025113	ddx42	99	72.251	ENSPCIG00000009093	DDX42	89	76.241	Phascolarctos_cinereus
ENSACLG00000025113	ddx42	100	84.418	ENSPFOG00000014104	ddx42	89	89.531	Poecilia_formosa
ENSACLG00000025113	ddx42	100	83.778	ENSPLAG00000010522	ddx42	89	89.290	Poecilia_latipinna
ENSACLG00000025113	ddx42	100	85.048	ENSPMEG00000010744	ddx42	100	83.617	Poecilia_mexicana
ENSACLG00000025113	ddx42	100	84.050	ENSPREG00000009926	ddx42	100	82.700	Poecilia_reticulata
ENSACLG00000025113	ddx42	99	70.262	ENSPPYG00000008531	DDX42	88	75.388	Pongo_abelii
ENSACLG00000025113	ddx42	92	67.705	ENSPCAG00000002474	DDX42	88	72.346	Procavia_capensis
ENSACLG00000025113	ddx42	99	62.619	ENSPCOG00000001559	DDX42	92	73.684	Propithecus_coquereli
ENSACLG00000025113	ddx42	99	70.688	ENSPVAG00000000160	DDX42	90	74.201	Pteropus_vampyrus
ENSACLG00000025113	ddx42	85	96.723	ENSPNYG00000013954	ddx42	97	97.523	Pundamilia_nyererei
ENSACLG00000025113	ddx42	97	76.226	ENSPNAG00000017352	ddx42	90	82.019	Pygocentrus_nattereri
ENSACLG00000025113	ddx42	99	72.311	ENSRNOG00000009474	Ddx42	89	77.300	Rattus_norvegicus
ENSACLG00000025113	ddx42	99	73.106	ENSRBIG00000004781	DDX42	94	81.409	Rhinopithecus_bieti
ENSACLG00000025113	ddx42	99	73.106	ENSRROG00000029794	DDX42	92	75.610	Rhinopithecus_roxellana
ENSACLG00000025113	ddx42	99	73.007	ENSSBOG00000029624	DDX42	97	77.857	Saimiri_boliviensis_boliviensis
ENSACLG00000025113	ddx42	99	72.356	ENSSHAG00000012896	-	88	76.758	Sarcophilus_harrisii
ENSACLG00000025113	ddx42	71	49.774	ENSSHAG00000007919	-	85	53.022	Sarcophilus_harrisii
ENSACLG00000025113	ddx42	86	86.752	ENSSFOG00015014064	ddx42	83	86.497	Scleropages_formosus
ENSACLG00000025113	ddx42	100	89.059	ENSSMAG00000009077	ddx42	100	88.594	Scophthalmus_maximus
ENSACLG00000025113	ddx42	100	92.779	ENSSDUG00000022221	ddx42	100	92.123	Seriola_dumerili
ENSACLG00000025113	ddx42	100	91.199	ENSSLDG00000018483	ddx42	100	90.649	Seriola_lalandi_dorsalis
ENSACLG00000025113	ddx42	99	71.838	ENSSARG00000009847	DDX42	89	76.464	Sorex_araneus
ENSACLG00000025113	ddx42	99	73.701	ENSSPUG00000018806	DDX42	99	72.175	Sphenodon_punctatus
ENSACLG00000025113	ddx42	100	91.776	ENSSPAG00000013055	ddx42	100	92.763	Stegastes_partitus
ENSACLG00000025113	ddx42	85	71.798	ENSSSCG00000017289	DDX42	84	76.912	Sus_scrofa
ENSACLG00000025113	ddx42	99	73.433	ENSTGUG00000001931	DDX42	90	76.505	Taeniopygia_guttata
ENSACLG00000025113	ddx42	100	83.846	ENSTRUG00000010711	ddx42	99	89.933	Takifugu_rubripes
ENSACLG00000025113	ddx42	82	78.088	ENSTBEG00000010159	DDX42	98	77.660	Tupaia_belangeri
ENSACLG00000025113	ddx42	100	71.682	ENSTTRG00000006962	DDX42	89	77.116	Tursiops_truncatus
ENSACLG00000025113	ddx42	99	72.862	ENSUAMG00000007321	DDX42	89	77.180	Ursus_americanus
ENSACLG00000025113	ddx42	99	72.641	ENSUMAG00000017438	DDX42	89	76.703	Ursus_maritimus
ENSACLG00000025113	ddx42	94	75.172	ENSVPAG00000009633	DDX42	83	75.497	Vicugna_pacos
ENSACLG00000025113	ddx42	99	71.773	ENSVVUG00000006095	DDX42	89	77.300	Vulpes_vulpes
ENSACLG00000025113	ddx42	100	72.316	ENSXETG00000003245	ddx42	89	76.235	Xenopus_tropicalis
ENSACLG00000025113	ddx42	84	88.657	ENSXCOG00000017560	ddx42	87	90.830	Xiphophorus_couchianus
ENSACLG00000025113	ddx42	100	88.999	ENSXMAG00000008138	ddx42	100	88.009	Xiphophorus_maculatus