EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000025178 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 2908 bases
Position: chr15:34159105-34162012
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000037165	RVT_1	PF00078.27	5.3e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000038046	-	2908	-	ENSACLP00000037165	928 (aa)	-	-

Gene Model

Click here to download ENSACLG00000025178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000025178's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000025178	-	100	96.983	ENSACLG00000013967	-	92	96.983
ENSACLG00000025178	-	69	98.746	ENSACLG00000023336	-	79	98.746
ENSACLG00000025178	-	100	98.599	ENSACLG00000017392	-	86	98.599
ENSACLG00000025178	-	100	99.030	ENSACLG00000009407	-	85	99.030
ENSACLG00000025178	-	94	98.050	ENSACLG00000013139	-	100	98.050
ENSACLG00000025178	-	100	96.983	ENSACLG00000007511	-	85	96.983
ENSACLG00000025178	-	90	97.735	ENSACLG00000021406	-	97	97.735
ENSACLG00000025178	-	82	98.285	ENSACLG00000006057	-	99	98.285
ENSACLG00000025178	-	69	99.057	ENSACLG00000014939	-	79	99.057
ENSACLG00000025178	-	100	97.953	ENSACLG00000009148	-	100	97.953
ENSACLG00000025178	-	73	98.964	ENSACLG00000022824	-	80	98.964
ENSACLG00000025178	-	100	98.707	ENSACLG00000019948	-	85	98.707
ENSACLG00000025178	-	83	99.086	ENSACLG00000005419	-	99	99.086
ENSACLG00000025178	-	78	99.175	ENSACLG00000016654	-	81	99.175
ENSACLG00000025178	-	100	98.922	ENSACLG00000013574	-	99	98.922
ENSACLG00000025178	-	100	98.922	ENSACLG00000011507	-	85	98.922
ENSACLG00000025178	-	100	98.384	ENSACLG00000021834	-	91	98.384
ENSACLG00000025178	-	90	97.356	ENSACLG00000021830	-	98	97.356
ENSACLG00000025178	-	82	98.549	ENSACLG00000004963	-	99	98.549
ENSACLG00000025178	-	100	99.246	ENSACLG00000003607	-	93	99.246
ENSACLG00000025178	-	82	98.163	ENSACLG00000027475	-	100	98.163
ENSACLG00000025178	-	100	98.599	ENSACLG00000013988	-	91	98.599
ENSACLG00000025178	-	100	98.924	ENSACLG00000016079	-	91	98.924
ENSACLG00000025178	-	100	98.815	ENSACLG00000018006	-	100	98.815
ENSACLG00000025178	-	100	98.707	ENSACLG00000007447	-	85	98.707
ENSACLG00000025178	-	100	99.031	ENSACLG00000013632	-	85	99.031
ENSACLG00000025178	-	81	98.797	ENSACLG00000017721	-	98	98.797
ENSACLG00000025178	-	100	98.707	ENSACLG00000003757	-	85	98.707
ENSACLG00000025178	-	100	98.384	ENSACLG00000002396	-	85	98.384
ENSACLG00000025178	-	100	98.922	ENSACLG00000014121	-	85	98.922
ENSACLG00000025178	-	99	97.948	ENSACLG00000019821	-	84	97.948
ENSACLG00000025178	-	100	99.030	ENSACLG00000022388	-	85	99.030
ENSACLG00000025178	-	99	98.150	ENSACLG00000002775	-	92	98.150
ENSACLG00000025178	-	100	99.030	ENSACLG00000017606	-	91	99.030

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000025178	-	60	36.760	ENSLACG00000004832	-	100	36.760	Latimeria_chalumnae
ENSACLG00000025178	-	52	31.474	ENSLACG00000001539	-	99	31.275	Latimeria_chalumnae
ENSACLG00000025178	-	52	34.800	ENSLACG00000005758	-	90	44.130	Latimeria_chalumnae
ENSACLG00000025178	-	58	34.513	ENSLACG00000016962	-	100	40.244	Latimeria_chalumnae
ENSACLG00000025178	-	68	39.753	ENSLACG00000004233	-	98	39.753	Latimeria_chalumnae
ENSACLG00000025178	-	70	45.077	ENSLACG00000012911	-	98	45.077	Latimeria_chalumnae
ENSACLG00000025178	-	65	34.824	ENSLACG00000006107	-	99	34.185	Latimeria_chalumnae
ENSACLG00000025178	-	53	32.122	ENSLACG00000013633	-	94	30.632	Latimeria_chalumnae
ENSACLG00000025178	-	86	37.515	ENSLACG00000013644	-	99	37.515	Latimeria_chalumnae
ENSACLG00000025178	-	99	98.477	ENSMZEG00005028496	-	93	98.477	Maylandia_zebra
ENSACLG00000025178	-	100	79.010	ENSORLG00000028038	-	86	79.010	Oryzias_latipes
ENSACLG00000025178	-	100	78.902	ENSORLG00000026631	-	86	78.902	Oryzias_latipes
ENSACLG00000025178	-	99	76.848	ENSORLG00000028428	-	81	76.848	Oryzias_latipes
ENSACLG00000025178	-	100	78.687	ENSORLG00000025841	-	86	78.687	Oryzias_latipes
ENSACLG00000025178	-	94	79.954	ENSORLG00000028072	-	100	79.954	Oryzias_latipes
ENSACLG00000025178	-	100	78.794	ENSORLG00000023099	-	100	78.794	Oryzias_latipes
ENSACLG00000025178	-	84	80.385	ENSORLG00000023528	-	99	80.385	Oryzias_latipes
ENSACLG00000025178	-	88	80.633	ENSORLG00000022216	-	100	80.633	Oryzias_latipes
ENSACLG00000025178	-	89	81.062	ENSORLG00000025660	-	99	81.062	Oryzias_latipes
ENSACLG00000025178	-	94	80.298	ENSORLG00000027125	-	100	80.298	Oryzias_latipes
ENSACLG00000025178	-	100	78.902	ENSORLG00020010783	-	86	78.902	Oryzias_latipes_hni
ENSACLG00000025178	-	94	80.069	ENSORLG00020020703	-	100	80.069	Oryzias_latipes_hni
ENSACLG00000025178	-	89	81.062	ENSORLG00020006197	-	99	81.062	Oryzias_latipes_hni
ENSACLG00000025178	-	94	80.298	ENSORLG00020020895	-	100	80.298	Oryzias_latipes_hni
ENSACLG00000025178	-	96	78.499	ENSORLG00020004983	-	85	78.499	Oryzias_latipes_hni
ENSACLG00000025178	-	100	79.440	ENSPREG00000022240	-	86	79.440	Poecilia_reticulata
ENSACLG00000025178	-	89	81.884	ENSXMAG00000021428	-	99	81.884	Xiphophorus_maculatus