EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000025246 (Gene tree)
Gene ID: 113013110
Gene Symbol: -
Alias: -
Full Name: poly(rC)-binding protein 4-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 20388 bases
Position: chr20:8922470-8942857
Accession: 113013110
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000037303	KH_1	PF00013.29	5.3e-51	1	3
ENSACLP00000037303	KH_1	PF00013.29	5.3e-51	2	3
ENSACLP00000037303	KH_1	PF00013.29	5.3e-51	3	3
ENSACLP00000037328	KH_1	PF00013.29	2.4e-39	1	2
ENSACLP00000037328	KH_1	PF00013.29	2.4e-39	2	2
ENSACLP00000037303	KH_2	PF07650.17	6.8e-15	1	1
ENSACLP00000037328	KH_2	PF07650.17	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000038209	-	1290	-	ENSACLP00000037328	429 (aa)	-	-
ENSACLT00000038184	-	1456	-	ENSACLP00000037303	457 (aa)	XP_026009520	UPI00032A20CD

Gene Model

Click here to download ENSACLG00000025246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000025246's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000025246	-	71	64.458	ENSACLG00000011835	pcbp3	93	64.458
ENSACLG00000025246	-	85	52.770	ENSACLG00000018264	PCBP2	98	61.424
ENSACLG00000025246	-	52	38.043	ENSACLG00000006708	fubp1	55	39.080
ENSACLG00000025246	-	97	55.921	ENSACLG00000019285	zgc:110045	99	55.482
ENSACLG00000025246	-	74	61.404	ENSACLG00000003801	-	97	61.404
ENSACLG00000025246	-	51	48.485	ENSACLG00000018220	hnrnpk	56	48.485
ENSACLG00000025246	-	71	30.872	ENSACLG00000000050	igf2bp3	65	30.872
ENSACLG00000025246	-	72	36.486	ENSACLG00000001424	KHSRP	57	36.486
ENSACLG00000025246	-	98	74.066	ENSACLG00000013348	pcbp4	100	72.565
ENSACLG00000025246	-	51	50.769	ENSACLG00000001537	hnrpkl	55	50.769
ENSACLG00000025246	-	69	32.857	ENSACLG00000015512	igf2bp2a	68	38.356
ENSACLG00000025246	-	63	41.538	ENSACLG00000003002	nova1	63	39.744

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000025246	-	96	57.623	ENSG00000090097	PCBP4	97	75.000	Homo_sapiens
ENSACLG00000025246	-	100	96.937	ENSAPOG00000009897	-	100	96.937	Acanthochromis_polyacanthus
ENSACLG00000025246	-	54	87.500	ENSAPOG00000018462	-	67	87.500	Acanthochromis_polyacanthus
ENSACLG00000025246	-	95	58.124	ENSAMEG00000009211	PCBP4	97	58.352	Ailuropoda_melanoleuca
ENSACLG00000025246	-	94	99.274	ENSACIG00000020434	-	100	99.274	Amphilophus_citrinellus
ENSACLG00000025246	-	94	74.645	ENSACIG00000015264	pcbp4	90	75.472	Amphilophus_citrinellus
ENSACLG00000025246	-	100	96.037	ENSAOCG00000021366	-	100	96.037	Amphiprion_ocellaris
ENSACLG00000025246	-	94	65.217	ENSAOCG00000006924	-	100	65.217	Amphiprion_ocellaris
ENSACLG00000025246	-	94	76.794	ENSAPEG00000023157	pcbp4	100	77.512	Amphiprion_percula
ENSACLG00000025246	-	77	94.595	ENSAPEG00000009555	-	88	94.595	Amphiprion_percula
ENSACLG00000025246	-	100	92.009	ENSATEG00000006511	-	100	92.009	Anabas_testudineus
ENSACLG00000025246	-	94	70.244	ENSATEG00000008529	pcbp4	93	70.460	Anabas_testudineus
ENSACLG00000025246	-	95	62.785	ENSACAG00000011701	PCBP4	97	62.329	Anolis_carolinensis
ENSACLG00000025246	-	96	57.623	ENSANAG00000023072	PCBP4	99	57.848	Aotus_nancymaae
ENSACLG00000025246	-	100	82.833	ENSAMXG00000033125	pcbp4	100	82.833	Astyanax_mexicanus
ENSACLG00000025246	-	95	58.124	ENSBTAG00000018622	PCBP4	97	58.581	Bos_taurus
ENSACLG00000025246	-	96	57.848	ENSCJAG00000005783	PCBP4	99	58.072	Callithrix_jacchus
ENSACLG00000025246	-	95	58.124	ENSCAFG00000010019	PCBP4	97	58.352	Canis_familiaris
ENSACLG00000025246	-	95	58.124	ENSCAFG00020022361	PCBP4	97	58.352	Canis_lupus_dingo
ENSACLG00000025246	-	95	58.352	ENSCHIG00000012918	PCBP4	97	58.581	Capra_hircus
ENSACLG00000025246	-	95	58.352	ENSTSYG00000008765	PCBP4	97	58.581	Carlito_syrichta
ENSACLG00000025246	-	95	58.124	ENSCAPG00000005895	PCBP4	97	58.124	Cavia_aperea
ENSACLG00000025246	-	95	58.124	ENSCPOG00000014617	PCBP4	97	58.352	Cavia_porcellus
ENSACLG00000025246	-	96	57.848	ENSCCAG00000033268	PCBP4	99	58.072	Cebus_capucinus
ENSACLG00000025246	-	96	57.848	ENSCATG00000032034	PCBP4	99	58.072	Cercocebus_atys
ENSACLG00000025246	-	95	58.124	ENSCLAG00000008356	PCBP4	97	58.352	Chinchilla_lanigera
ENSACLG00000025246	-	96	57.848	ENSCSAG00000013913	PCBP4	99	58.072	Chlorocebus_sabaeus
ENSACLG00000025246	-	95	62.100	ENSCPBG00000016554	PCBP4	95	61.872	Chrysemys_picta_bellii
ENSACLG00000025246	-	96	57.848	ENSCANG00000038865	PCBP4	99	58.072	Colobus_angolensis_palliatus
ENSACLG00000025246	-	95	58.352	ENSCGRG00001014953	Pcbp4	97	58.581	Cricetulus_griseus_chok1gshd
ENSACLG00000025246	-	95	58.352	ENSCGRG00000008617	Pcbp4	97	58.581	Cricetulus_griseus_crigri
ENSACLG00000025246	-	100	85.355	ENSCSEG00000021041	PCBP4	100	85.126	Cynoglossus_semilaevis
ENSACLG00000025246	-	98	70.000	ENSCSEG00000014487	pcbp4	95	70.772	Cynoglossus_semilaevis
ENSACLG00000025246	-	100	93.654	ENSCVAG00000013090	-	100	93.654	Cyprinodon_variegatus
ENSACLG00000025246	-	93	68.916	ENSCVAG00000003674	pcbp4	98	66.590	Cyprinodon_variegatus
ENSACLG00000025246	-	100	81.935	ENSDARG00000024276	pcbp4	100	82.167	Danio_rerio
ENSACLG00000025246	-	92	79.167	ENSDNOG00000033951	PCBP4	87	72.289	Dasypus_novemcinctus
ENSACLG00000025246	-	95	57.666	ENSDORG00000000573	Pcbp4	97	58.124	Dipodomys_ordii
ENSACLG00000025246	-	67	56.270	ENSETEG00000001778	PCBP4	96	56.410	Echinops_telfairi
ENSACLG00000025246	-	95	57.895	ENSEASG00005012889	PCBP4	97	58.352	Equus_asinus_asinus
ENSACLG00000025246	-	95	57.895	ENSECAG00000024218	PCBP4	97	58.352	Equus_caballus
ENSACLG00000025246	-	100	75.368	ENSELUG00000018204	pcbp4	100	75.840	Esox_lucius
ENSACLG00000025246	-	100	87.257	ENSELUG00000001870	-	100	87.257	Esox_lucius
ENSACLG00000025246	-	95	58.124	ENSFCAG00000009148	PCBP4	97	58.352	Felis_catus
ENSACLG00000025246	-	93	58.140	ENSFALG00000008831	PCBP4	95	58.372	Ficedula_albicollis
ENSACLG00000025246	-	95	57.895	ENSFDAG00000012692	PCBP4	97	58.124	Fukomys_damarensis
ENSACLG00000025246	-	94	69.727	ENSFHEG00000002769	-	97	69.727	Fundulus_heteroclitus
ENSACLG00000025246	-	98	87.723	ENSGMOG00000017799	-	100	87.054	Gadus_morhua
ENSACLG00000025246	-	95	57.763	ENSGALG00000027695	PCBP4	97	58.447	Gallus_gallus
ENSACLG00000025246	-	83	93.386	ENSGAFG00000021090	-	78	95.640	Gambusia_affinis
ENSACLG00000025246	-	98	90.625	ENSGACG00000002664	-	100	91.295	Gasterosteus_aculeatus
ENSACLG00000025246	-	95	62.329	ENSGAGG00000022116	PCBP4	95	62.100	Gopherus_agassizii
ENSACLG00000025246	-	96	57.623	ENSGGOG00000012474	PCBP4	99	58.072	Gorilla_gorilla
ENSACLG00000025246	-	100	99.781	ENSHBUG00000005329	-	100	99.781	Haplochromis_burtoni
ENSACLG00000025246	-	98	73.859	ENSHBUG00000009472	pcbp4	100	72.167	Haplochromis_burtoni
ENSACLG00000025246	-	95	58.352	ENSHGLG00000012018	PCBP4	97	58.581	Heterocephalus_glaber_female
ENSACLG00000025246	-	95	56.591	ENSHGLG00100008748	PCBP4	97	56.818	Heterocephalus_glaber_male
ENSACLG00000025246	-	100	88.210	ENSHCOG00000010838	-	97	98.026	Hippocampus_comes
ENSACLG00000025246	-	100	83.261	ENSIPUG00000008212	pcbp4	100	83.261	Ictalurus_punctatus
ENSACLG00000025246	-	95	56.522	ENSSTOG00000002573	PCBP4	97	56.751	Ictidomys_tridecemlineatus
ENSACLG00000025246	-	95	58.352	ENSJJAG00000016235	Pcbp4	97	58.581	Jaculus_jaculus
ENSACLG00000025246	-	98	75.641	ENSKMAG00000014252	pcbp4	96	75.906	Kryptolebias_marmoratus
ENSACLG00000025246	-	100	94.967	ENSKMAG00000017554	-	100	94.967	Kryptolebias_marmoratus
ENSACLG00000025246	-	100	95.624	ENSLBEG00000011345	-	100	95.624	Labrus_bergylta
ENSACLG00000025246	-	100	66.087	ENSLACG00000015899	PCBP4	98	73.276	Latimeria_chalumnae
ENSACLG00000025246	-	100	80.392	ENSLOCG00000013402	pcbp4	100	80.392	Lepisosteus_oculatus
ENSACLG00000025246	-	94	55.556	ENSLAFG00000010732	PCBP4	100	56.049	Loxodonta_africana
ENSACLG00000025246	-	96	57.848	ENSMFAG00000001431	PCBP4	99	58.072	Macaca_fascicularis
ENSACLG00000025246	-	96	57.848	ENSMMUG00000022205	PCBP4	94	63.333	Macaca_mulatta
ENSACLG00000025246	-	96	57.848	ENSMNEG00000028553	PCBP4	99	58.072	Macaca_nemestrina
ENSACLG00000025246	-	96	57.848	ENSMLEG00000027083	PCBP4	99	58.072	Mandrillus_leucophaeus
ENSACLG00000025246	-	98	74.004	ENSMAMG00000010163	pcbp4	100	71.856	Mastacembelus_armatus
ENSACLG00000025246	-	100	96.937	ENSMAMG00000011364	-	100	96.937	Mastacembelus_armatus
ENSACLG00000025246	-	98	74.066	ENSMZEG00005008852	pcbp4	100	72.565	Maylandia_zebra
ENSACLG00000025246	-	100	100.000	ENSMZEG00005023631	-	100	100.000	Maylandia_zebra
ENSACLG00000025246	-	68	53.023	ENSMGAG00000003895	-	99	53.023	Meleagris_gallopavo
ENSACLG00000025246	-	53	73.656	ENSMGAG00000005091	-	85	73.656	Meleagris_gallopavo
ENSACLG00000025246	-	95	58.352	ENSMAUG00000021064	Pcbp4	97	58.581	Mesocricetus_auratus
ENSACLG00000025246	-	95	58.352	ENSMICG00000002686	PCBP4	97	58.581	Microcebus_murinus
ENSACLG00000025246	-	95	58.810	ENSMOCG00000013557	Pcbp4	97	59.039	Microtus_ochrogaster
ENSACLG00000025246	-	100	90.703	ENSMMOG00000020533	-	100	90.703	Mola_mola
ENSACLG00000025246	-	70	62.179	ENSMMOG00000017756	pcbp4	97	60.736	Mola_mola
ENSACLG00000025246	-	95	58.581	ENSMODG00000011790	PCBP4	82	57.895	Monodelphis_domestica
ENSACLG00000025246	-	94	95.431	ENSMALG00000022117	-	100	95.148	Monopterus_albus
ENSACLG00000025246	-	89	78.502	ENSMALG00000020318	pcbp4	91	77.367	Monopterus_albus
ENSACLG00000025246	-	95	58.352	MGP_CAROLIEiJ_G0032623	Pcbp4	93	75.543	Mus_caroli
ENSACLG00000025246	-	95	58.352	ENSMUSG00000023495	Pcbp4	91	80.741	Mus_musculus
ENSACLG00000025246	-	95	58.352	MGP_PahariEiJ_G0015491	Pcbp4	93	75.543	Mus_pahari
ENSACLG00000025246	-	95	58.352	MGP_SPRETEiJ_G0033768	-	93	75.543	Mus_spretus
ENSACLG00000025246	-	95	58.124	ENSMPUG00000011766	PCBP4	97	58.352	Mustela_putorius_furo
ENSACLG00000025246	-	95	58.352	ENSNGAG00000013148	Pcbp4	97	58.581	Nannospalax_galili
ENSACLG00000025246	-	93	65.796	ENSNBRG00000007475	pcbp4	98	63.170	Neolamprologus_brichardi
ENSACLG00000025246	-	100	98.368	ENSNBRG00000015885	-	100	98.368	Neolamprologus_brichardi
ENSACLG00000025246	-	96	57.848	ENSNLEG00000007064	PCBP4	99	58.072	Nomascus_leucogenys
ENSACLG00000025246	-	94	48.438	ENSMEUG00000006917	PCBP4	95	48.098	Notamacropus_eugenii
ENSACLG00000025246	-	94	51.131	ENSOPRG00000008763	PCBP4	98	50.897	Ochotona_princeps
ENSACLG00000025246	-	95	58.124	ENSODEG00000018230	PCBP4	97	58.352	Octodon_degus
ENSACLG00000025246	-	95	57.798	ENSOANG00000014110	PCBP4	94	57.569	Ornithorhynchus_anatinus
ENSACLG00000025246	-	95	58.581	ENSOCUG00000025336	PCBP4	97	58.581	Oryctolagus_cuniculus
ENSACLG00000025246	-	98	72.211	ENSORLG00000003061	pcbp4	96	73.053	Oryzias_latipes
ENSACLG00000025246	-	100	90.745	ENSORLG00000009899	-	100	91.946	Oryzias_latipes
ENSACLG00000025246	-	100	95.405	ENSORLG00020001183	-	100	95.405	Oryzias_latipes_hni
ENSACLG00000025246	-	99	70.722	ENSORLG00015019262	pcbp4	97	71.340	Oryzias_latipes_hsok
ENSACLG00000025246	-	100	95.842	ENSORLG00015017819	-	100	95.842	Oryzias_latipes_hsok
ENSACLG00000025246	-	98	70.362	ENSOMEG00000003516	-	96	71.002	Oryzias_melastigma
ENSACLG00000025246	-	100	96.061	ENSOMEG00000011545	-	100	96.061	Oryzias_melastigma
ENSACLG00000025246	-	95	58.124	ENSOGAG00000032384	PCBP4	97	58.352	Otolemur_garnettii
ENSACLG00000025246	-	94	56.416	ENSOARG00000006603	PCBP4	100	56.901	Ovis_aries
ENSACLG00000025246	-	96	57.399	ENSPPAG00000038764	PCBP4	99	57.623	Pan_paniscus
ENSACLG00000025246	-	95	58.124	ENSPPRG00000006165	PCBP4	97	58.352	Panthera_pardus
ENSACLG00000025246	-	95	58.124	ENSPTIG00000005401	PCBP4	93	58.352	Panthera_tigris_altaica
ENSACLG00000025246	-	96	57.623	ENSPTRG00000014983	PCBP4	99	57.848	Pan_troglodytes
ENSACLG00000025246	-	96	57.848	ENSPANG00000026222	PCBP4	99	58.072	Papio_anubis
ENSACLG00000025246	-	100	83.406	ENSPKIG00000010244	pcbp4	100	83.188	Paramormyrops_kingsleyae
ENSACLG00000025246	-	100	74.672	ENSPKIG00000005487	-	100	74.236	Paramormyrops_kingsleyae
ENSACLG00000025246	-	79	58.808	ENSPSIG00000011286	PCBP4	96	58.410	Pelodiscus_sinensis
ENSACLG00000025246	-	94	74.524	ENSPMGG00000000063	pcbp4	99	74.286	Periophthalmus_magnuspinnatus
ENSACLG00000025246	-	100	84.703	ENSPMGG00000022732	-	100	85.160	Periophthalmus_magnuspinnatus
ENSACLG00000025246	-	95	58.352	ENSPEMG00000009276	Pcbp4	97	58.581	Peromyscus_maniculatus_bairdii
ENSACLG00000025246	-	95	59.039	ENSPCIG00000018151	PCBP4	93	58.581	Phascolarctos_cinereus
ENSACLG00000025246	-	95	71.429	ENSPFOG00000014474	pcbp4	96	81.818	Poecilia_formosa
ENSACLG00000025246	-	100	94.530	ENSPFOG00000002989	-	100	94.530	Poecilia_formosa
ENSACLG00000025246	-	93	64.846	ENSPLAG00000011438	-	98	64.403	Poecilia_latipinna
ENSACLG00000025246	-	93	69.974	ENSPLAG00000023316	pcbp4	89	71.540	Poecilia_latipinna
ENSACLG00000025246	-	64	61.775	ENSPMEG00000012990	pcbp4	100	63.423	Poecilia_mexicana
ENSACLG00000025246	-	100	89.044	ENSPREG00000017370	-	100	89.044	Poecilia_reticulata
ENSACLG00000025246	-	69	57.679	ENSPREG00000021498	-	81	91.071	Poecilia_reticulata
ENSACLG00000025246	-	96	57.848	ENSPPYG00000013822	PCBP4	99	58.072	Pongo_abelii
ENSACLG00000025246	-	94	51.945	ENSPCAG00000009515	PCBP4	97	52.064	Procavia_capensis
ENSACLG00000025246	-	95	58.352	ENSPCOG00000027535	PCBP4	97	58.581	Propithecus_coquereli
ENSACLG00000025246	-	94	49.231	ENSPVAG00000012474	PCBP4	98	48.366	Pteropus_vampyrus
ENSACLG00000025246	-	94	75.118	ENSPNYG00000019234	pcbp4	100	72.973	Pundamilia_nyererei
ENSACLG00000025246	-	100	98.368	ENSPNYG00000003098	-	100	98.368	Pundamilia_nyererei
ENSACLG00000025246	-	100	83.441	ENSPNAG00000025434	pcbp4	100	83.441	Pygocentrus_nattereri
ENSACLG00000025246	-	95	58.352	ENSRNOG00000012406	Pcbp4	97	58.581	Rattus_norvegicus
ENSACLG00000025246	-	96	57.848	ENSRBIG00000043793	PCBP4	99	58.072	Rhinopithecus_bieti
ENSACLG00000025246	-	96	57.848	ENSRROG00000034589	PCBP4	99	58.072	Rhinopithecus_roxellana
ENSACLG00000025246	-	96	57.848	ENSSBOG00000027029	PCBP4	99	58.072	Saimiri_boliviensis_boliviensis
ENSACLG00000025246	-	69	59.004	ENSSHAG00000007362	PCBP4	100	59.004	Sarcophilus_harrisii
ENSACLG00000025246	-	75	83.766	ENSSFOG00015008221	pcbp4	60	83.766	Scleropages_formosus
ENSACLG00000025246	-	100	74.783	ENSSFOG00015012075	PCBP4	100	74.348	Scleropages_formosus
ENSACLG00000025246	-	98	74.316	ENSSMAG00000005827	pcbp4	95	74.895	Scophthalmus_maximus
ENSACLG00000025246	-	100	93.668	ENSSMAG00000009392	-	99	93.668	Scophthalmus_maximus
ENSACLG00000025246	-	100	96.037	ENSSDUG00000015540	-	100	96.037	Seriola_dumerili
ENSACLG00000025246	-	94	76.867	ENSSDUG00000017719	pcbp4	97	77.590	Seriola_dumerili
ENSACLG00000025246	-	58	84.177	ENSSLDG00000024847	-	77	86.928	Seriola_lalandi_dorsalis
ENSACLG00000025246	-	100	96.037	ENSSLDG00000007851	-	100	96.037	Seriola_lalandi_dorsalis
ENSACLG00000025246	-	95	56.322	ENSSPUG00000000194	PCBP4	97	56.322	Sphenodon_punctatus
ENSACLG00000025246	-	100	96.937	ENSSPAG00000003033	-	100	96.937	Stegastes_partitus
ENSACLG00000025246	-	94	64.249	ENSSPAG00000019058	-	92	64.508	Stegastes_partitus
ENSACLG00000025246	-	95	58.124	ENSSSCG00000028446	PCBP4	97	58.581	Sus_scrofa
ENSACLG00000025246	-	70	58.204	ENSTGUG00000006393	PCBP4	96	58.204	Taeniopygia_guttata
ENSACLG00000025246	-	100	91.608	ENSTRUG00000007426	-	100	91.608	Takifugu_rubripes
ENSACLG00000025246	-	98	86.353	ENSTNIG00000017887	-	100	85.459	Tetraodon_nigroviridis
ENSACLG00000025246	-	85	39.163	ENSTBEG00000015770	PCBP4	100	39.163	Tupaia_belangeri
ENSACLG00000025246	-	73	53.439	ENSTTRG00000001443	PCBP4	83	53.439	Tursiops_truncatus
ENSACLG00000025246	-	94	54.155	ENSUAMG00000020871	PCBP4	100	54.424	Ursus_americanus
ENSACLG00000025246	-	86	59.453	ENSUMAG00000021609	PCBP4	90	59.158	Ursus_maritimus
ENSACLG00000025246	-	95	58.124	ENSVVUG00000026857	PCBP4	97	58.352	Vulpes_vulpes
ENSACLG00000025246	-	94	84.367	ENSXCOG00000000111	-	100	84.367	Xiphophorus_couchianus
ENSACLG00000025246	-	100	94.530	ENSXMAG00000024530	-	100	94.530	Xiphophorus_maculatus
ENSACLG00000025246	-	78	82.778	ENSXMAG00000015709	pcbp4	75	82.778	Xiphophorus_maculatus
ENSACLG00000025246	-	90	67.734	ENSXMAG00000022188	-	90	69.212	Xiphophorus_maculatus