EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000025256 (Gene tree)
Gene ID: 113020342
Gene Symbol: rnf113a
Alias: wu:fj91a07|zgc:110007|znf183
Full Name: ring finger protein 113A
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 4492 bases
Position: chr4:5816169-5820660
Accession: 113020342
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000037479	zf-CCCH	PF00642.24	1.2e-08	1	1
ENSACLP00000037467	zf-CCCH	PF00642.24	1.2e-08	1	1
ENSACLP00000037452	zf-CCCH	PF00642.24	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000038362	-	885	-	ENSACLP00000037479	294 (aa)	-	-
ENSACLT00000038349	-	894	-	ENSACLP00000037467	297 (aa)	-	-
ENSACLT00000038334	-	969	-	ENSACLP00000037452	322 (aa)	XP_026020002	UPI000329C0EF

Gene Model

Click here to download ENSACLG00000025256's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000025256's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000025256	rnf113a	99	69.697	ENSG00000125352	RNF113A	96	70.606	Homo_sapiens
ENSACLG00000025256	rnf113a	93	60.656	ENSG00000139797	RNF113B	93	60.328	Homo_sapiens
ENSACLG00000025256	rnf113a	100	88.199	ENSAPOG00000017510	rnf113a	100	88.199	Acanthochromis_polyacanthus
ENSACLG00000025256	rnf113a	96	71.517	ENSAMEG00000019845	-	92	71.207	Ailuropoda_melanoleuca
ENSACLG00000025256	rnf113a	100	83.871	ENSACIG00000007458	rnf113a	100	83.871	Amphilophus_citrinellus
ENSACLG00000025256	rnf113a	100	88.820	ENSAOCG00000003485	rnf113a	100	88.820	Amphiprion_ocellaris
ENSACLG00000025256	rnf113a	100	88.820	ENSAPEG00000001084	rnf113a	100	88.820	Amphiprion_percula
ENSACLG00000025256	rnf113a	100	88.509	ENSATEG00000022950	rnf113a	100	88.509	Anabas_testudineus
ENSACLG00000025256	rnf113a	82	86.939	ENSAPLG00000012510	-	94	84.375	Anas_platyrhynchos
ENSACLG00000025256	rnf113a	93	76.721	ENSACAG00000012485	-	96	76.393	Anolis_carolinensis
ENSACLG00000025256	rnf113a	95	71.698	ENSANAG00000024332	-	95	72.013	Aotus_nancymaae
ENSACLG00000025256	rnf113a	93	61.184	ENSANAG00000020431	RNF113B	93	61.513	Aotus_nancymaae
ENSACLG00000025256	rnf113a	97	73.125	ENSANAG00000013925	-	94	73.125	Aotus_nancymaae
ENSACLG00000025256	rnf113a	100	84.783	ENSAMXG00000011273	rnf113a	100	84.783	Astyanax_mexicanus
ENSACLG00000025256	rnf113a	97	69.876	ENSBTAG00000006034	RNF113A	94	71.207	Bos_taurus
ENSACLG00000025256	rnf113a	97	64.242	ENSBTAG00000008684	-	96	62.722	Bos_taurus
ENSACLG00000025256	rnf113a	91	47.020	WBGene00010476	rnf-113	77	46.358	Caenorhabditis_elegans
ENSACLG00000025256	rnf113a	97	71.739	ENSCJAG00000022327	RNF113A	94	71.739	Callithrix_jacchus
ENSACLG00000025256	rnf113a	93	62.500	ENSCJAG00000004501	RNF113B	93	63.487	Callithrix_jacchus
ENSACLG00000025256	rnf113a	99	67.761	ENSCAFG00000018430	-	96	68.060	Canis_familiaris
ENSACLG00000025256	rnf113a	99	59.644	ENSCAFG00000018373	-	96	60.534	Canis_familiaris
ENSACLG00000025256	rnf113a	99	58.160	ENSCAFG00020020280	-	96	60.831	Canis_lupus_dingo
ENSACLG00000025256	rnf113a	99	67.761	ENSCAFG00020004044	-	96	68.060	Canis_lupus_dingo
ENSACLG00000025256	rnf113a	97	65.517	ENSCHIG00000015616	-	94	65.831	Capra_hircus
ENSACLG00000025256	rnf113a	99	68.485	ENSCHIG00000018820	-	96	69.789	Capra_hircus
ENSACLG00000025256	rnf113a	99	70.695	ENSTSYG00000001308	RNF113A	92	72.956	Carlito_syrichta
ENSACLG00000025256	rnf113a	99	70.122	ENSCPOG00000038517	-	98	70.122	Cavia_porcellus
ENSACLG00000025256	rnf113a	93	62.791	ENSCCAG00000021327	RNF113B	92	63.455	Cebus_capucinus
ENSACLG00000025256	rnf113a	96	72.785	ENSCCAG00000013617	RNF113A	92	72.785	Cebus_capucinus
ENSACLG00000025256	rnf113a	97	70.497	ENSCATG00000002702	RNF113A	94	71.429	Cercocebus_atys
ENSACLG00000025256	rnf113a	99	70.871	ENSCLAG00000017479	-	96	70.871	Chinchilla_lanigera
ENSACLG00000025256	rnf113a	92	60.667	ENSCSAG00000000222	RNF113B	88	60.927	Chlorocebus_sabaeus
ENSACLG00000025256	rnf113a	97	61.830	ENSCSAG00000019472	-	93	62.069	Chlorocebus_sabaeus
ENSACLG00000025256	rnf113a	80	69.173	ENSCHOG00000008711	-	100	69.549	Choloepus_hoffmanni
ENSACLG00000025256	rnf113a	95	76.375	ENSCPBG00000026980	-	95	76.375	Chrysemys_picta_bellii
ENSACLG00000025256	rnf113a	94	62.500	ENSCING00000009197	-	96	62.821	Ciona_intestinalis
ENSACLG00000025256	rnf113a	81	69.582	ENSCSAVG00000006210	-	90	66.327	Ciona_savignyi
ENSACLG00000025256	rnf113a	93	59.736	ENSCANG00000041552	RNF113B	95	59.223	Colobus_angolensis_palliatus
ENSACLG00000025256	rnf113a	99	69.394	ENSCANG00000037715	RNF113A	96	70.303	Colobus_angolensis_palliatus
ENSACLG00000025256	rnf113a	99	68.902	ENSCGRG00001002251	Rnf113a1	96	69.207	Cricetulus_griseus_chok1gshd
ENSACLG00000025256	rnf113a	99	68.598	ENSCGRG00000019441	Rnf113a1	96	68.902	Cricetulus_griseus_crigri
ENSACLG00000025256	rnf113a	96	69.688	ENSCGRG00000016675	Rnf113a2	95	69.688	Cricetulus_griseus_crigri
ENSACLG00000025256	rnf113a	100	86.957	ENSCSEG00000021570	rnf113a	86	86.957	Cynoglossus_semilaevis
ENSACLG00000025256	rnf113a	100	85.093	ENSCVAG00000011305	rnf113a	100	85.093	Cyprinodon_variegatus
ENSACLG00000025256	rnf113a	100	82.609	ENSDARG00000037930	rnf113a	100	82.609	Danio_rerio
ENSACLG00000025256	rnf113a	98	70.154	ENSDORG00000027624	Rnf113a2	96	70.859	Dipodomys_ordii
ENSACLG00000025256	rnf113a	93	58.544	FBgn0038772	mdlc	91	56.881	Drosophila_melanogaster
ENSACLG00000025256	rnf113a	99	70.122	ENSETEG00000018346	-	96	70.732	Echinops_telfairi
ENSACLG00000025256	rnf113a	96	74.675	ENSEBUG00000016079	rnf113a	94	73.701	Eptatretus_burgeri
ENSACLG00000025256	rnf113a	99	67.976	ENSEASG00005010538	-	96	67.976	Equus_asinus_asinus
ENSACLG00000025256	rnf113a	96	69.159	ENSECAG00000004638	-	100	69.470	Equus_caballus
ENSACLG00000025256	rnf113a	99	70.393	ENSECAG00000003934	-	96	70.695	Equus_caballus
ENSACLG00000025256	rnf113a	100	83.540	ENSELUG00000020657	rnf113a	100	83.540	Esox_lucius
ENSACLG00000025256	rnf113a	97	69.255	ENSFCAG00000024392	-	91	70.588	Felis_catus
ENSACLG00000025256	rnf113a	96	68.634	ENSFCAG00000028962	-	93	68.323	Felis_catus
ENSACLG00000025256	rnf113a	97	69.565	ENSFCAG00000025700	-	94	70.898	Felis_catus
ENSACLG00000025256	rnf113a	83	84.615	ENSFALG00000004633	-	94	77.586	Ficedula_albicollis
ENSACLG00000025256	rnf113a	100	86.957	ENSFHEG00000023305	rnf113a	100	86.957	Fundulus_heteroclitus
ENSACLG00000025256	rnf113a	97	79.503	ENSGMOG00000004541	rnf113a	97	78.882	Gadus_morhua
ENSACLG00000025256	rnf113a	94	77.419	ENSGALG00000000538	RNF113A	94	76.547	Gallus_gallus
ENSACLG00000025256	rnf113a	99	84.472	ENSGAFG00000011863	rnf113a	99	84.161	Gambusia_affinis
ENSACLG00000025256	rnf113a	99	85.538	ENSGACG00000009738	rnf113a	99	85.538	Gasterosteus_aculeatus
ENSACLG00000025256	rnf113a	95	75.405	ENSGAGG00000020490	-	95	75.405	Gopherus_agassizii
ENSACLG00000025256	rnf113a	99	69.697	ENSGGOG00000002324	RNF113A	96	70.606	Gorilla_gorilla
ENSACLG00000025256	rnf113a	93	60.984	ENSGGOG00000023052	RNF113B	93	60.656	Gorilla_gorilla
ENSACLG00000025256	rnf113a	100	99.689	ENSHBUG00000008626	rnf113a	100	99.689	Haplochromis_burtoni
ENSACLG00000025256	rnf113a	99	70.517	ENSHGLG00000019571	-	92	72.381	Heterocephalus_glaber_female
ENSACLG00000025256	rnf113a	96	70.717	ENSHGLG00100019582	-	92	71.028	Heterocephalus_glaber_male
ENSACLG00000025256	rnf113a	99	87.850	ENSHCOG00000003421	rnf113a	99	87.850	Hippocampus_comes
ENSACLG00000025256	rnf113a	100	82.609	ENSIPUG00000013431	RNF113A	100	82.609	Ictalurus_punctatus
ENSACLG00000025256	rnf113a	99	69.578	ENSSTOG00000019866	-	96	69.578	Ictidomys_tridecemlineatus
ENSACLG00000025256	rnf113a	78	56.170	ENSJJAG00000019849	Rnf113a1	90	49.823	Jaculus_jaculus
ENSACLG00000025256	rnf113a	100	86.025	ENSKMAG00000009830	rnf113a	100	86.335	Kryptolebias_marmoratus
ENSACLG00000025256	rnf113a	100	88.199	ENSLBEG00000004627	rnf113a	100	88.199	Labrus_bergylta
ENSACLG00000025256	rnf113a	93	82.667	ENSLACG00000013178	rnf113a	93	82.000	Latimeria_chalumnae
ENSACLG00000025256	rnf113a	100	80.186	ENSLOCG00000011785	rnf113a	100	80.186	Lepisosteus_oculatus
ENSACLG00000025256	rnf113a	99	68.389	ENSLAFG00000013906	-	96	68.389	Loxodonta_africana
ENSACLG00000025256	rnf113a	97	70.497	ENSMFAG00000018472	RNF113A	94	71.429	Macaca_fascicularis
ENSACLG00000025256	rnf113a	97	70.497	ENSMMUG00000020223	RNF113A	94	71.429	Macaca_mulatta
ENSACLG00000025256	rnf113a	97	70.497	ENSMNEG00000019778	RNF113A	94	71.429	Macaca_nemestrina
ENSACLG00000025256	rnf113a	97	70.497	ENSMLEG00000020750	RNF113A	94	71.429	Mandrillus_leucophaeus
ENSACLG00000025256	rnf113a	78	70.130	ENSMLEG00000038757	RNF113B	75	71.875	Mandrillus_leucophaeus
ENSACLG00000025256	rnf113a	100	88.820	ENSMAMG00000021895	rnf113a	100	88.820	Mastacembelus_armatus
ENSACLG00000025256	rnf113a	100	100.000	ENSMZEG00005023086	rnf113a	100	100.000	Maylandia_zebra
ENSACLG00000025256	rnf113a	82	85.306	ENSMGAG00000001753	-	94	80.435	Meleagris_gallopavo
ENSACLG00000025256	rnf113a	100	66.265	ENSMICG00000038084	-	96	67.470	Microcebus_murinus
ENSACLG00000025256	rnf113a	99	69.880	ENSMICG00000001750	-	96	69.880	Microcebus_murinus
ENSACLG00000025256	rnf113a	99	67.988	ENSMOCG00000005370	-	94	67.477	Microtus_ochrogaster
ENSACLG00000025256	rnf113a	99	88.785	ENSMMOG00000016954	rnf113a	100	88.785	Mola_mola
ENSACLG00000025256	rnf113a	100	81.677	ENSMALG00000007938	rnf113a	100	81.677	Monopterus_albus
ENSACLG00000025256	rnf113a	93	72.222	MGP_CAROLIEiJ_G0017943	Rnf113a2	91	72.549	Mus_caroli
ENSACLG00000025256	rnf113a	93	72.222	ENSMUSG00000098134	Rnf113a2	91	72.549	Mus_musculus
ENSACLG00000025256	rnf113a	99	68.902	ENSMUSG00000036537	Rnf113a1	96	69.207	Mus_musculus
ENSACLG00000025256	rnf113a	93	72.222	MGP_PahariEiJ_G0029702	Rnf113a2	91	72.549	Mus_pahari
ENSACLG00000025256	rnf113a	99	68.598	MGP_PahariEiJ_G0031547	Rnf113a1	96	68.997	Mus_pahari
ENSACLG00000025256	rnf113a	99	68.902	MGP_SPRETEiJ_G0034156	Rnf113a1	96	69.207	Mus_spretus
ENSACLG00000025256	rnf113a	93	72.222	MGP_SPRETEiJ_G0018788	Rnf113a2	91	72.549	Mus_spretus
ENSACLG00000025256	rnf113a	98	70.552	ENSMPUG00000019358	-	94	70.552	Mustela_putorius_furo
ENSACLG00000025256	rnf113a	96	70.154	ENSMLUG00000016812	-	93	68.308	Myotis_lucifugus
ENSACLG00000025256	rnf113a	96	69.136	ENSMLUG00000010856	-	94	67.901	Myotis_lucifugus
ENSACLG00000025256	rnf113a	100	99.068	ENSNBRG00000004314	rnf113a	100	99.068	Neolamprologus_brichardi
ENSACLG00000025256	rnf113a	93	60.535	ENSNLEG00000007844	RNF113B	93	60.855	Nomascus_leucogenys
ENSACLG00000025256	rnf113a	99	69.697	ENSNLEG00000018333	RNF113A	96	70.606	Nomascus_leucogenys
ENSACLG00000025256	rnf113a	96	70.186	ENSMEUG00000001855	-	96	70.807	Notamacropus_eugenii
ENSACLG00000025256	rnf113a	100	97.516	ENSONIG00000000741	rnf113a	100	97.516	Oreochromis_niloticus
ENSACLG00000025256	rnf113a	96	71.290	ENSOANG00000002592	-	92	71.290	Ornithorhynchus_anatinus
ENSACLG00000025256	rnf113a	99	68.278	ENSOCUG00000016207	-	96	68.976	Oryctolagus_cuniculus
ENSACLG00000025256	rnf113a	99	87.850	ENSORLG00000002442	rnf113a	100	87.850	Oryzias_latipes
ENSACLG00000025256	rnf113a	99	87.539	ENSORLG00020011512	rnf113a	100	87.539	Oryzias_latipes_hni
ENSACLG00000025256	rnf113a	99	87.850	ENSORLG00015004382	rnf113a	100	87.850	Oryzias_latipes_hsok
ENSACLG00000025256	rnf113a	99	88.199	ENSOMEG00000020197	rnf113a	100	88.199	Oryzias_melastigma
ENSACLG00000025256	rnf113a	96	70.476	ENSOGAG00000011638	RNF113B	92	70.476	Otolemur_garnettii
ENSACLG00000025256	rnf113a	99	69.789	ENSOGAG00000031602	RNF113A	96	70.091	Otolemur_garnettii
ENSACLG00000025256	rnf113a	97	64.110	ENSOARG00000015294	-	94	64.724	Ovis_aries
ENSACLG00000025256	rnf113a	99	68.485	ENSOARG00000009771	-	96	69.789	Ovis_aries
ENSACLG00000025256	rnf113a	93	61.311	ENSPPAG00000040641	RNF113B	93	60.984	Pan_paniscus
ENSACLG00000025256	rnf113a	99	69.697	ENSPPAG00000009537	RNF113A	96	70.606	Pan_paniscus
ENSACLG00000025256	rnf113a	97	69.565	ENSPPRG00000011512	-	94	70.898	Panthera_pardus
ENSACLG00000025256	rnf113a	96	69.470	ENSPPRG00000020640	-	93	70.186	Panthera_pardus
ENSACLG00000025256	rnf113a	97	69.565	ENSPTIG00000007986	-	94	70.898	Panthera_tigris_altaica
ENSACLG00000025256	rnf113a	93	61.311	ENSPTRG00000005987	RNF113B	93	60.984	Pan_troglodytes
ENSACLG00000025256	rnf113a	99	69.697	ENSPTRG00000022231	RNF113A	96	70.606	Pan_troglodytes
ENSACLG00000025256	rnf113a	97	70.497	ENSPANG00000011522	RNF113A	94	71.429	Papio_anubis
ENSACLG00000025256	rnf113a	100	82.298	ENSPKIG00000016796	rnf113a	100	82.298	Paramormyrops_kingsleyae
ENSACLG00000025256	rnf113a	91	80.812	ENSPSIG00000012676	-	98	79.371	Pelodiscus_sinensis
ENSACLG00000025256	rnf113a	100	83.025	ENSPMGG00000009668	rnf113a	100	83.025	Periophthalmus_magnuspinnatus
ENSACLG00000025256	rnf113a	99	69.301	ENSPEMG00000002490	Rnf113a1	96	69.301	Peromyscus_maniculatus_bairdii
ENSACLG00000025256	rnf113a	81	81.818	ENSPMAG00000005184	rnf113a	92	76.838	Petromyzon_marinus
ENSACLG00000025256	rnf113a	95	70.062	ENSPCIG00000028916	-	92	69.136	Phascolarctos_cinereus
ENSACLG00000025256	rnf113a	100	83.901	ENSPFOG00000014248	rnf113a	100	84.211	Poecilia_formosa
ENSACLG00000025256	rnf113a	100	83.591	ENSPLAG00000010435	rnf113a	100	83.901	Poecilia_latipinna
ENSACLG00000025256	rnf113a	100	84.211	ENSPMEG00000010641	rnf113a	100	83.901	Poecilia_mexicana
ENSACLG00000025256	rnf113a	100	84.211	ENSPREG00000009900	rnf113a	99	83.901	Poecilia_reticulata
ENSACLG00000025256	rnf113a	93	61.639	ENSPPYG00000005460	RNF113B	94	62.623	Pongo_abelii
ENSACLG00000025256	rnf113a	99	69.697	ENSPPYG00000020676	RNF113A	96	70.606	Pongo_abelii
ENSACLG00000025256	rnf113a	99	68.598	ENSPCAG00000014633	-	96	68.598	Procavia_capensis
ENSACLG00000025256	rnf113a	95	69.182	ENSPCOG00000005671	-	92	67.812	Propithecus_coquereli
ENSACLG00000025256	rnf113a	100	100.000	ENSPNYG00000013863	rnf113a	100	100.000	Pundamilia_nyererei
ENSACLG00000025256	rnf113a	100	84.161	ENSPNAG00000017428	rnf113a	100	84.161	Pygocentrus_nattereri
ENSACLG00000025256	rnf113a	99	68.598	ENSRNOG00000034040	LOC108348079	96	68.902	Rattus_norvegicus
ENSACLG00000025256	rnf113a	99	68.598	ENSRNOG00000059412	Rnf113a1	96	68.902	Rattus_norvegicus
ENSACLG00000025256	rnf113a	99	69.394	ENSRBIG00000017389	RNF113A	96	70.303	Rhinopithecus_bieti
ENSACLG00000025256	rnf113a	93	60.066	ENSRBIG00000036094	RNF113B	94	59.547	Rhinopithecus_bieti
ENSACLG00000025256	rnf113a	93	60.396	ENSRROG00000045661	RNF113B	94	59.871	Rhinopithecus_roxellana
ENSACLG00000025256	rnf113a	99	69.394	ENSRROG00000012149	RNF113A	96	70.303	Rhinopithecus_roxellana
ENSACLG00000025256	rnf113a	93	60.328	ENSSBOG00000029719	RNF113B	93	61.967	Saimiri_boliviensis_boliviensis
ENSACLG00000025256	rnf113a	96	72.468	ENSSBOG00000017704	RNF113A	92	72.468	Saimiri_boliviensis_boliviensis
ENSACLG00000025256	rnf113a	96	69.231	ENSSHAG00000008839	-	93	68.807	Sarcophilus_harrisii
ENSACLG00000025256	rnf113a	97	82.372	ENSSFOG00015016567	rnf113a	98	80.625	Scleropages_formosus
ENSACLG00000025256	rnf113a	100	86.957	ENSSMAG00000009235	rnf113a	100	86.957	Scophthalmus_maximus
ENSACLG00000025256	rnf113a	100	89.441	ENSSDUG00000022244	rnf113a	100	89.441	Seriola_dumerili
ENSACLG00000025256	rnf113a	100	89.441	ENSSLDG00000018582	rnf113a	100	89.441	Seriola_lalandi_dorsalis
ENSACLG00000025256	rnf113a	98	71.084	ENSSARG00000010436	-	97	70.958	Sorex_araneus
ENSACLG00000025256	rnf113a	93	76.974	ENSSPUG00000018786	-	84	76.974	Sphenodon_punctatus
ENSACLG00000025256	rnf113a	100	89.130	ENSSPAG00000013187	rnf113a	100	89.130	Stegastes_partitus
ENSACLG00000025256	rnf113a	99	68.278	ENSSSCG00000032973	-	96	68.278	Sus_scrofa
ENSACLG00000025256	rnf113a	94	77.451	ENSTGUG00000001947	-	94	77.451	Taeniopygia_guttata
ENSACLG00000025256	rnf113a	98	83.281	ENSTRUG00000011142	rnf113a	98	83.596	Takifugu_rubripes
ENSACLG00000025256	rnf113a	98	85.220	ENSTNIG00000014938	rnf113a	98	85.220	Tetraodon_nigroviridis
ENSACLG00000025256	rnf113a	96	70.978	ENSTBEG00000012687	-	92	71.924	Tupaia_belangeri
ENSACLG00000025256	rnf113a	99	66.867	ENSUAMG00000024564	-	98	68.072	Ursus_americanus
ENSACLG00000025256	rnf113a	93	69.805	ENSUMAG00000002167	-	93	71.104	Ursus_maritimus
ENSACLG00000025256	rnf113a	92	69.435	ENSVPAG00000004521	-	95	69.103	Vicugna_pacos
ENSACLG00000025256	rnf113a	52	72.258	ENSVVUG00000004522	-	82	55.556	Vulpes_vulpes
ENSACLG00000025256	rnf113a	99	67.761	ENSVVUG00000011662	-	96	68.060	Vulpes_vulpes
ENSACLG00000025256	rnf113a	97	77.460	ENSXETG00000002042	rnf113a	96	76.752	Xenopus_tropicalis
ENSACLG00000025256	rnf113a	96	85.390	ENSXCOG00000017542	rnf113a	98	85.065	Xiphophorus_couchianus
ENSACLG00000025256	rnf113a	100	84.830	ENSXMAG00000008169	rnf113a	100	84.520	Xiphophorus_maculatus