EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000025356 (Gene tree)
Gene ID: 113024347
Gene Symbol: smarca5
Alias: SWI/SNF related|matrix associated|actin dependent regulator of chromatin A5|chunp6878|fb26d12|fb49g04|im:7146484|wu:fb26d12|wu:fb49g04|zgc:158434
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 12743 bases
Position: chr6:25469153-25481895
Accession: 113024347
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000037504	ResIII	PF04851.15	7.2e-11	1	1
ENSACLP00000037504	DEAD	PF00270.29	4.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000038387	-	6003	-	ENSACLP00000037504	1036 (aa)	XP_026027118	UPI000329D813

Gene Model

Click here to download ENSACLG00000025356's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000025356's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000025356	smarca5	52	40.800	ENSACLG00000007613	hells	75	41.779
ENSACLG00000025356	smarca5	52	43.169	ENSACLG00000019304	chd1l	60	43.066

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000025356	smarca5	95	83.165	ENSG00000102038	SMARCA1	96	81.158	Homo_sapiens
ENSACLG00000025356	smarca5	100	97.683	ENSAPOG00000016035	smarca5	100	97.683	Acanthochromis_polyacanthus
ENSACLG00000025356	smarca5	95	82.271	ENSAMEG00000015218	SMARCA1	96	80.310	Ailuropoda_melanoleuca
ENSACLG00000025356	smarca5	87	99.667	ENSACIG00000016982	smarca5	100	99.667	Amphilophus_citrinellus
ENSACLG00000025356	smarca5	100	97.683	ENSAOCG00000015578	smarca5	100	97.683	Amphiprion_ocellaris
ENSACLG00000025356	smarca5	100	97.683	ENSAPEG00000011117	smarca5	100	97.683	Amphiprion_percula
ENSACLG00000025356	smarca5	100	97.780	ENSATEG00000012894	smarca5	100	97.780	Anabas_testudineus
ENSACLG00000025356	smarca5	94	84.521	ENSAPLG00000013149	SMARCA1	99	84.521	Anas_platyrhynchos
ENSACLG00000025356	smarca5	98	82.600	ENSACAG00000011376	SMARCA1	94	85.031	Anolis_carolinensis
ENSACLG00000025356	smarca5	95	78.182	ENSANAG00000023098	SMARCA1	96	76.447	Aotus_nancymaae
ENSACLG00000025356	smarca5	90	84.962	ENSAMXG00000011227	smarca1	99	86.248	Astyanax_mexicanus
ENSACLG00000025356	smarca5	100	91.242	ENSAMXG00000005709	smarca5	100	91.242	Astyanax_mexicanus
ENSACLG00000025356	smarca5	95	83.384	ENSBTAG00000002292	SMARCA1	95	80.681	Bos_taurus
ENSACLG00000025356	smarca5	96	62.747	WBGene00002169	isw-1	95	63.777	Caenorhabditis_elegans
ENSACLG00000025356	smarca5	94	83.707	ENSCJAG00000002868	SMARCA1	96	81.158	Callithrix_jacchus
ENSACLG00000025356	smarca5	95	73.784	ENSCAFG00000018673	SMARCA1	99	75.176	Canis_familiaris
ENSACLG00000025356	smarca5	95	83.232	ENSCAFG00020001751	SMARCA1	96	81.354	Canis_lupus_dingo
ENSACLG00000025356	smarca5	95	83.080	ENSCHIG00000009837	SMARCA1	97	80.428	Capra_hircus
ENSACLG00000025356	smarca5	98	80.405	ENSTSYG00000004240	SMARCA1	94	84.688	Carlito_syrichta
ENSACLG00000025356	smarca5	95	81.964	ENSCPOG00000013601	SMARCA1	93	82.389	Cavia_porcellus
ENSACLG00000025356	smarca5	95	80.444	ENSCCAG00000030817	SMARCA1	96	78.508	Cebus_capucinus
ENSACLG00000025356	smarca5	93	84.161	ENSCATG00000015921	SMARCA1	94	82.245	Cercocebus_atys
ENSACLG00000025356	smarca5	95	82.460	ENSCLAG00000002171	SMARCA1	97	80.156	Chinchilla_lanigera
ENSACLG00000025356	smarca5	95	83.165	ENSCSAG00000008460	SMARCA1	96	81.158	Chlorocebus_sabaeus
ENSACLG00000025356	smarca5	95	84.397	ENSCPBG00000001146	SMARCA1	93	84.725	Chrysemys_picta_bellii
ENSACLG00000025356	smarca5	96	74.155	ENSCING00000004110	swi/snf	99	74.155	Ciona_intestinalis
ENSACLG00000025356	smarca5	98	72.576	ENSCSAVG00000004620	-	99	75.839	Ciona_savignyi
ENSACLG00000025356	smarca5	95	83.266	ENSCANG00000007183	SMARCA1	96	81.256	Colobus_angolensis_palliatus
ENSACLG00000025356	smarca5	95	82.258	ENSCGRG00001010776	Smarca1	96	80.275	Cricetulus_griseus_chok1gshd
ENSACLG00000025356	smarca5	95	81.662	ENSCGRG00000015301	Smarca1	97	81.687	Cricetulus_griseus_crigri
ENSACLG00000025356	smarca5	100	96.332	ENSCSEG00000000328	smarca5	100	96.332	Cynoglossus_semilaevis
ENSACLG00000025356	smarca5	100	97.008	ENSCVAG00000008668	smarca5	100	97.008	Cyprinodon_variegatus
ENSACLG00000025356	smarca5	94	83.083	ENSDARG00000012776	smarca1	96	83.083	Danio_rerio
ENSACLG00000025356	smarca5	100	91.426	ENSDARG00000052348	smarca5	100	91.426	Danio_rerio
ENSACLG00000025356	smarca5	93	84.194	ENSDNOG00000004315	SMARCA1	94	81.939	Dasypus_novemcinctus
ENSACLG00000025356	smarca5	96	82.010	ENSDORG00000009270	Smarca1	90	84.624	Dipodomys_ordii
ENSACLG00000025356	smarca5	95	74.498	FBgn0011604	Iswi	97	74.300	Drosophila_melanogaster
ENSACLG00000025356	smarca5	78	81.818	ENSETEG00000017426	SMARCA1	83	81.818	Echinops_telfairi
ENSACLG00000025356	smarca5	97	80.933	ENSEBUG00000001239	smarca5	99	80.933	Eptatretus_burgeri
ENSACLG00000025356	smarca5	95	78.370	ENSEASG00005008218	SMARCA1	99	79.656	Equus_asinus_asinus
ENSACLG00000025356	smarca5	95	83.266	ENSECAG00000012106	SMARCA1	97	80.799	Equus_caballus
ENSACLG00000025356	smarca5	76	84.106	ENSEEUG00000014927	SMARCA1	80	84.106	Erinaceus_europaeus
ENSACLG00000025356	smarca5	94	84.426	ENSELUG00000010515	smarca1	95	85.529	Esox_lucius
ENSACLG00000025356	smarca5	95	83.131	ENSFCAG00000018496	SMARCA1	96	81.256	Felis_catus
ENSACLG00000025356	smarca5	88	85.777	ENSFALG00000000209	SMARCA1	98	85.777	Ficedula_albicollis
ENSACLG00000025356	smarca5	93	82.755	ENSFDAG00000009818	SMARCA1	94	83.246	Fukomys_damarensis
ENSACLG00000025356	smarca5	100	95.415	ENSFHEG00000007687	smarca5	100	95.415	Fundulus_heteroclitus
ENSACLG00000025356	smarca5	96	82.423	ENSGALG00000008431	SMARCA1	95	85.432	Gallus_gallus
ENSACLG00000025356	smarca5	100	97.394	ENSGAFG00000017731	smarca5	100	97.394	Gambusia_affinis
ENSACLG00000025356	smarca5	94	84.979	ENSGAGG00000023575	SMARCA1	99	84.979	Gopherus_agassizii
ENSACLG00000025356	smarca5	70	96.000	ENSGGOG00000012841	-	92	80.000	Gorilla_gorilla
ENSACLG00000025356	smarca5	95	82.359	ENSHGLG00000003080	SMARCA1	96	80.373	Heterocephalus_glaber_female
ENSACLG00000025356	smarca5	95	81.864	ENSHGLG00100001102	SMARCA1	99	82.287	Heterocephalus_glaber_male
ENSACLG00000025356	smarca5	100	96.528	ENSHCOG00000005458	smarca5	100	96.528	Hippocampus_comes
ENSACLG00000025356	smarca5	100	91.128	ENSIPUG00000005229	SMARCA5	99	93.413	Ictalurus_punctatus
ENSACLG00000025356	smarca5	96	82.522	ENSIPUG00000016905	Smarca1	99	84.216	Ictalurus_punctatus
ENSACLG00000025356	smarca5	95	83.030	ENSSTOG00000014524	SMARCA1	97	81.610	Ictidomys_tridecemlineatus
ENSACLG00000025356	smarca5	95	81.745	ENSJJAG00000002593	Smarca1	98	78.640	Jaculus_jaculus
ENSACLG00000025356	smarca5	100	96.815	ENSKMAG00000003777	smarca5	100	96.815	Kryptolebias_marmoratus
ENSACLG00000025356	smarca5	100	95.463	ENSLBEG00000018112	smarca5	100	95.463	Labrus_bergylta
ENSACLG00000025356	smarca5	94	95.297	ENSLBEG00000013295	SMARCA1	100	96.962	Labrus_bergylta
ENSACLG00000025356	smarca5	94	85.670	ENSLACG00000016697	SMARCA1	95	85.670	Latimeria_chalumnae
ENSACLG00000025356	smarca5	94	85.612	ENSLOCG00000014591	smarca1	95	85.612	Lepisosteus_oculatus
ENSACLG00000025356	smarca5	96	81.393	ENSLAFG00000000896	SMARCA1	98	82.490	Loxodonta_africana
ENSACLG00000025356	smarca5	95	83.165	ENSMFAG00000002117	SMARCA1	94	84.762	Macaca_fascicularis
ENSACLG00000025356	smarca5	93	84.161	ENSMMUG00000008818	SMARCA1	97	84.984	Macaca_mulatta
ENSACLG00000025356	smarca5	93	84.161	ENSMNEG00000041768	SMARCA1	94	84.762	Macaca_nemestrina
ENSACLG00000025356	smarca5	95	83.165	ENSMLEG00000043198	SMARCA1	96	81.158	Mandrillus_leucophaeus
ENSACLG00000025356	smarca5	100	97.498	ENSMAMG00000014294	smarca5	100	97.498	Mastacembelus_armatus
ENSACLG00000025356	smarca5	100	100.000	ENSMZEG00005009369	smarca5	100	100.000	Maylandia_zebra
ENSACLG00000025356	smarca5	94	83.400	ENSMGAG00000007042	SMARCA1	98	83.400	Meleagris_gallopavo
ENSACLG00000025356	smarca5	93	82.734	ENSMAUG00000008133	Smarca1	94	80.711	Mesocricetus_auratus
ENSACLG00000025356	smarca5	95	83.434	ENSMICG00000015768	SMARCA1	93	84.012	Microcebus_murinus
ENSACLG00000025356	smarca5	95	81.545	ENSMOCG00000009464	Smarca1	96	79.492	Microtus_ochrogaster
ENSACLG00000025356	smarca5	96	96.378	ENSMMOG00000005547	smarca5	100	96.378	Mola_mola
ENSACLG00000025356	smarca5	99	81.712	ENSMODG00000013187	-	94	84.615	Monodelphis_domestica
ENSACLG00000025356	smarca5	100	97.300	ENSMALG00000002081	smarca5	100	97.300	Monopterus_albus
ENSACLG00000025356	smarca5	95	81.846	MGP_CAROLIEiJ_G0033034	Smarca1	96	79.980	Mus_caroli
ENSACLG00000025356	smarca5	95	81.946	ENSMUSG00000031099	Smarca1	96	80.078	Mus_musculus
ENSACLG00000025356	smarca5	95	82.121	MGP_PahariEiJ_G0031579	Smarca1	96	80.236	Mus_pahari
ENSACLG00000025356	smarca5	95	81.946	MGP_SPRETEiJ_G0034192	Smarca1	96	80.078	Mus_spretus
ENSACLG00000025356	smarca5	95	82.236	ENSMPUG00000017423	SMARCA1	91	80.407	Mustela_putorius_furo
ENSACLG00000025356	smarca5	95	81.113	ENSMLUG00000029614	SMARCA1	93	81.325	Myotis_lucifugus
ENSACLG00000025356	smarca5	93	83.248	ENSNGAG00000006492	Smarca1	94	81.320	Nannospalax_galili
ENSACLG00000025356	smarca5	96	99.899	ENSNBRG00000004463	smarca5	100	99.899	Neolamprologus_brichardi
ENSACLG00000025356	smarca5	95	81.474	ENSNLEG00000015179	SMARCA1	94	84.038	Nomascus_leucogenys
ENSACLG00000025356	smarca5	88	76.749	ENSMEUG00000008819	SMARCA1	97	76.749	Notamacropus_eugenii
ENSACLG00000025356	smarca5	97	80.217	ENSODEG00000012163	SMARCA1	91	83.037	Octodon_degus
ENSACLG00000025356	smarca5	100	99.807	ENSONIG00000009993	smarca5	100	99.807	Oreochromis_niloticus
ENSACLG00000025356	smarca5	94	85.391	ENSOANG00000002862	SMARCA1	99	85.391	Ornithorhynchus_anatinus
ENSACLG00000025356	smarca5	95	83.384	ENSOCUG00000001047	SMARCA1	96	81.354	Oryctolagus_cuniculus
ENSACLG00000025356	smarca5	100	96.058	ENSORLG00000021998	smarca5	100	96.058	Oryzias_latipes
ENSACLG00000025356	smarca5	100	95.380	ENSORLG00020017679	smarca5	100	96.150	Oryzias_latipes_hni
ENSACLG00000025356	smarca5	100	96.435	ENSORLG00015017210	smarca5	100	96.435	Oryzias_latipes_hsok
ENSACLG00000025356	smarca5	100	96.625	ENSOMEG00000000086	smarca5	100	96.625	Oryzias_melastigma
ENSACLG00000025356	smarca5	93	83.676	ENSOGAG00000004399	SMARCA1	94	81.552	Otolemur_garnettii
ENSACLG00000025356	smarca5	94	83.640	ENSOARG00000014638	SMARCA1	99	83.640	Ovis_aries
ENSACLG00000025356	smarca5	95	83.165	ENSPPAG00000034647	SMARCA1	96	81.158	Pan_paniscus
ENSACLG00000025356	smarca5	95	83.232	ENSPPRG00000008929	SMARCA1	96	81.354	Panthera_pardus
ENSACLG00000025356	smarca5	95	81.467	ENSPTIG00000000915	SMARCA1	96	81.882	Panthera_tigris_altaica
ENSACLG00000025356	smarca5	95	83.165	ENSPTRG00000049876	SMARCA1	94	82.245	Pan_troglodytes
ENSACLG00000025356	smarca5	95	83.165	ENSPANG00000003871	SMARCA1	96	81.158	Papio_anubis
ENSACLG00000025356	smarca5	95	81.351	ENSPKIG00000013411	smarca1	99	81.231	Paramormyrops_kingsleyae
ENSACLG00000025356	smarca5	94	84.979	ENSPSIG00000010101	SMARCA1	99	84.979	Pelodiscus_sinensis
ENSACLG00000025356	smarca5	93	83.042	ENSPEMG00000017503	Smarca1	94	81.015	Peromyscus_maniculatus_bairdii
ENSACLG00000025356	smarca5	94	85.041	ENSPCIG00000015460	SMARCA1	96	85.041	Phascolarctos_cinereus
ENSACLG00000025356	smarca5	100	97.297	ENSPFOG00000007649	smarca5	100	97.297	Poecilia_formosa
ENSACLG00000025356	smarca5	100	97.297	ENSPLAG00000003363	smarca5	100	97.297	Poecilia_latipinna
ENSACLG00000025356	smarca5	100	97.394	ENSPMEG00000019849	smarca5	100	97.394	Poecilia_mexicana
ENSACLG00000025356	smarca5	100	97.297	ENSPREG00000023250	smarca5	100	97.297	Poecilia_reticulata
ENSACLG00000025356	smarca5	95	80.202	ENSPPYG00000020703	SMARCA1	96	78.410	Pongo_abelii
ENSACLG00000025356	smarca5	75	78.125	ENSPCOG00000020722	SMARCA1	93	80.564	Propithecus_coquereli
ENSACLG00000025356	smarca5	87	83.742	ENSPVAG00000003805	SMARCA1	88	83.837	Pteropus_vampyrus
ENSACLG00000025356	smarca5	58	100.000	ENSPNYG00000012299	smarca5	93	100.000	Pundamilia_nyererei
ENSACLG00000025356	smarca5	95	82.056	ENSRNOG00000003762	Smarca1	96	80.177	Rattus_norvegicus
ENSACLG00000025356	smarca5	95	83.266	ENSRROG00000034167	SMARCA1	96	81.256	Rhinopithecus_roxellana
ENSACLG00000025356	smarca5	94	83.845	ENSSBOG00000020641	SMARCA1	99	83.845	Saimiri_boliviensis_boliviensis
ENSACLG00000025356	smarca5	94	80.041	ENSSHAG00000013518	SMARCA1	99	80.041	Sarcophilus_harrisii
ENSACLG00000025356	smarca5	97	91.317	ENSSFOG00015016794	smarca5	100	93.299	Scleropages_formosus
ENSACLG00000025356	smarca5	95	84.024	ENSSFOG00015009043	smarca1	96	84.521	Scleropages_formosus
ENSACLG00000025356	smarca5	100	96.050	ENSSMAG00000004801	smarca5	100	96.050	Scophthalmus_maximus
ENSACLG00000025356	smarca5	100	97.297	ENSSDUG00000020690	smarca5	100	97.297	Seriola_dumerili
ENSACLG00000025356	smarca5	100	97.297	ENSSLDG00000025190	smarca5	100	97.297	Seriola_lalandi_dorsalis
ENSACLG00000025356	smarca5	78	84.698	ENSSARG00000000842	SMARCA1	81	84.698	Sorex_araneus
ENSACLG00000025356	smarca5	95	83.789	ENSSPUG00000000590	SMARCA1	98	82.510	Sphenodon_punctatus
ENSACLG00000025356	smarca5	100	97.683	ENSSPAG00000002894	smarca5	100	97.683	Stegastes_partitus
ENSACLG00000025356	smarca5	93	84.058	ENSSSCG00000012649	SMARCA1	96	82.329	Sus_scrofa
ENSACLG00000025356	smarca5	94	84.216	ENSTGUG00000003899	-	99	84.216	Taeniopygia_guttata
ENSACLG00000025356	smarca5	100	96.139	ENSTRUG00000014094	smarca5	100	96.139	Takifugu_rubripes
ENSACLG00000025356	smarca5	98	95.280	ENSTNIG00000017717	smarca5	97	95.575	Tetraodon_nigroviridis
ENSACLG00000025356	smarca5	86	82.816	ENSTBEG00000014973	SMARCA1	89	82.864	Tupaia_belangeri
ENSACLG00000025356	smarca5	93	79.877	ENSTTRG00000006168	SMARCA1	96	80.652	Tursiops_truncatus
ENSACLG00000025356	smarca5	95	83.065	ENSUAMG00000020201	SMARCA1	96	81.060	Ursus_americanus
ENSACLG00000025356	smarca5	95	79.133	ENSUMAG00000004073	SMARCA1	96	84.841	Ursus_maritimus
ENSACLG00000025356	smarca5	73	87.171	ENSVPAG00000010492	-	77	87.543	Vicugna_pacos
ENSACLG00000025356	smarca5	95	83.367	ENSVVUG00000008878	SMARCA1	98	85.304	Vulpes_vulpes
ENSACLG00000025356	smarca5	95	84.232	ENSXETG00000001526	smarca1	98	84.560	Xenopus_tropicalis
ENSACLG00000025356	smarca5	97	97.522	ENSXCOG00000011170	smarca5	100	97.522	Xiphophorus_couchianus
ENSACLG00000025356	smarca5	100	97.104	ENSXMAG00000009678	smarca5	100	97.104	Xiphophorus_maculatus