EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000025462 (Gene tree)
Gene ID: 113034249
Gene Symbol: ptrh1
Alias: zgc:112961
Full Name: peptidyl-tRNA hydrolase 1 homolog
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 11138 bases
Position: chr12:32327666-32338803
Accession: 113034249
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000037640	Pept_tRNA_hydro	PF01195.19	4.8e-45	1	1
ENSACLP00000037644	Pept_tRNA_hydro	PF01195.19	4.8e-45	1	1
ENSACLP00000037630	Pept_tRNA_hydro	PF01195.19	5.8e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000038513	-	4586	-	ENSACLP00000037630	279 (aa)	XP_026044441	UPI000E415721
ENSACLT00000038521	-	4508	-	ENSACLP00000037640	253 (aa)	XP_026044443	UPI000E42512C
ENSACLT00000038527	-	4380	-	ENSACLP00000037644	253 (aa)	XP_026044443	UPI000E42512C

Gene Model

Click here to download ENSACLG00000025462's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000025462's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000025462	ptrh1	76	55.959	ENSG00000187024	PTRH1	87	53.769	Homo_sapiens
ENSACLG00000025462	ptrh1	98	78.467	ENSAPOG00000000947	PTRH1	95	76.642	Acanthochromis_polyacanthus
ENSACLG00000025462	ptrh1	98	78.467	ENSAPOG00000010719	ptrh1	95	76.642	Acanthochromis_polyacanthus
ENSACLG00000025462	ptrh1	98	78.467	ENSAPOG00000003014	-	95	76.642	Acanthochromis_polyacanthus
ENSACLG00000025462	ptrh1	73	53.261	ENSAMEG00000016791	PTRH1	80	55.294	Ailuropoda_melanoleuca
ENSACLG00000025462	ptrh1	85	87.907	ENSACIG00000006734	ptrh1	91	87.907	Amphilophus_citrinellus
ENSACLG00000025462	ptrh1	94	81.013	ENSAOCG00000009725	ptrh1	95	78.102	Amphiprion_ocellaris
ENSACLG00000025462	ptrh1	94	81.013	ENSAPEG00000020993	ptrh1	95	78.102	Amphiprion_percula
ENSACLG00000025462	ptrh1	99	80.000	ENSATEG00000010003	ptrh1	99	78.986	Anabas_testudineus
ENSACLG00000025462	ptrh1	76	58.549	ENSANAG00000025547	PTRH1	84	57.292	Aotus_nancymaae
ENSACLG00000025462	ptrh1	93	64.435	ENSAMXG00000034117	ptrh1	94	61.154	Astyanax_mexicanus
ENSACLG00000025462	ptrh1	53	58.647	ENSBTAG00000012736	PTRH1	51	52.564	Bos_taurus
ENSACLG00000025462	ptrh1	72	58.011	ENSCJAG00000019841	PTRH1	73	52.778	Callithrix_jacchus
ENSACLG00000025462	ptrh1	73	55.135	ENSCAFG00000020123	PTRH1	80	57.310	Canis_familiaris
ENSACLG00000025462	ptrh1	73	55.435	ENSCAFG00020015776	PTRH1	77	57.647	Canis_lupus_dingo
ENSACLG00000025462	ptrh1	75	56.842	ENSCHIG00000008188	PTRH1	81	58.621	Capra_hircus
ENSACLG00000025462	ptrh1	53	57.778	ENSCAPG00000015926	PTRH1	83	60.870	Cavia_aperea
ENSACLG00000025462	ptrh1	73	56.757	ENSCPOG00000023968	PTRH1	78	59.036	Cavia_porcellus
ENSACLG00000025462	ptrh1	74	57.979	ENSCCAG00000023134	PTRH1	84	55.729	Cebus_capucinus
ENSACLG00000025462	ptrh1	76	56.477	ENSCATG00000042852	PTRH1	87	54.271	Cercocebus_atys
ENSACLG00000025462	ptrh1	76	55.959	ENSCLAG00000011155	PTRH1	84	54.974	Chinchilla_lanigera
ENSACLG00000025462	ptrh1	76	56.477	ENSCSAG00000013748	PTRH1	82	54.271	Chlorocebus_sabaeus
ENSACLG00000025462	ptrh1	66	54.217	ENSCPBG00000025207	PTRH1	83	56.164	Chrysemys_picta_bellii
ENSACLG00000025462	ptrh1	76	56.477	ENSCANG00000039856	PTRH1	87	54.271	Colobus_angolensis_palliatus
ENSACLG00000025462	ptrh1	75	56.021	ENSCGRG00001013108	Ptrh1	86	58.286	Cricetulus_griseus_chok1gshd
ENSACLG00000025462	ptrh1	71	57.778	ENSCGRG00000016553	Ptrh1	90	60.366	Cricetulus_griseus_crigri
ENSACLG00000025462	ptrh1	96	70.732	ENSCSEG00000010332	ptrh1	97	69.373	Cynoglossus_semilaevis
ENSACLG00000025462	ptrh1	99	72.826	ENSCVAG00000010701	ptrh1	99	75.000	Cyprinodon_variegatus
ENSACLG00000025462	ptrh1	100	58.893	ENSDARG00000098206	ptrh1	91	66.055	Danio_rerio
ENSACLG00000025462	ptrh1	74	58.511	ENSDNOG00000024194	PTRH1	79	60.355	Dasypus_novemcinctus
ENSACLG00000025462	ptrh1	69	59.091	ENSDORG00000013321	Ptrh1	77	60.606	Dipodomys_ordii
ENSACLG00000025462	ptrh1	75	55.263	ENSEASG00005020466	PTRH1	79	58.824	Equus_asinus_asinus
ENSACLG00000025462	ptrh1	73	55.978	ENSECAG00000007615	PTRH1	64	56.897	Equus_caballus
ENSACLG00000025462	ptrh1	98	65.992	ENSELUG00000015467	ptrh1	99	63.004	Esox_lucius
ENSACLG00000025462	ptrh1	75	53.403	ENSFCAG00000001483	PTRH1	82	56.897	Felis_catus
ENSACLG00000025462	ptrh1	68	53.801	ENSFALG00000001352	PTRH1	78	54.878	Ficedula_albicollis
ENSACLG00000025462	ptrh1	73	57.297	ENSFDAG00000020077	PTRH1	84	59.649	Fukomys_damarensis
ENSACLG00000025462	ptrh1	85	82.407	ENSFHEG00000010590	ptrh1	99	71.747	Fundulus_heteroclitus
ENSACLG00000025462	ptrh1	53	67.407	ENSGMOG00000009801	PTRH1	100	66.901	Gadus_morhua
ENSACLG00000025462	ptrh1	95	77.736	ENSGAFG00000016215	ptrh1	98	77.736	Gambusia_affinis
ENSACLG00000025462	ptrh1	79	77.500	ENSGACG00000014682	ptrh1	93	81.000	Gasterosteus_aculeatus
ENSACLG00000025462	ptrh1	80	53.695	ENSGAGG00000022860	PTRH1	78	56.571	Gopherus_agassizii
ENSACLG00000025462	ptrh1	76	56.477	ENSGGOG00000011033	PTRH1	87	54.271	Gorilla_gorilla
ENSACLG00000025462	ptrh1	100	98.566	ENSHBUG00000020824	ptrh1	100	98.566	Haplochromis_burtoni
ENSACLG00000025462	ptrh1	75	56.545	ENSHGLG00000019147	PTRH1	84	58.480	Heterocephalus_glaber_female
ENSACLG00000025462	ptrh1	75	52.880	ENSHGLG00100003681	PTRH1	86	54.386	Heterocephalus_glaber_male
ENSACLG00000025462	ptrh1	83	68.571	ENSHCOG00000014772	ptrh1	88	61.753	Hippocampus_comes
ENSACLG00000025462	ptrh1	96	61.789	ENSIPUG00000015364	ptrh1	94	61.789	Ictalurus_punctatus
ENSACLG00000025462	ptrh1	66	59.639	ENSSTOG00000008942	PTRH1	79	58.824	Ictidomys_tridecemlineatus
ENSACLG00000025462	ptrh1	76	56.995	ENSJJAG00000014338	Ptrh1	84	58.621	Jaculus_jaculus
ENSACLG00000025462	ptrh1	99	76.494	ENSKMAG00000003253	ptrh1	100	75.000	Kryptolebias_marmoratus
ENSACLG00000025462	ptrh1	50	87.302	ENSLBEG00000028842	ptrh1	75	87.302	Labrus_bergylta
ENSACLG00000025462	ptrh1	74	59.574	ENSLACG00000016741	PTRH1	71	62.209	Latimeria_chalumnae
ENSACLG00000025462	ptrh1	75	52.083	ENSLAFG00000021934	PTRH1	84	55.556	Loxodonta_africana
ENSACLG00000025462	ptrh1	76	56.477	ENSMFAG00000001700	PTRH1	87	54.271	Macaca_fascicularis
ENSACLG00000025462	ptrh1	76	56.477	ENSMMUG00000016424	PTRH1	87	54.271	Macaca_mulatta
ENSACLG00000025462	ptrh1	76	56.477	ENSMNEG00000033061	PTRH1	82	54.271	Macaca_nemestrina
ENSACLG00000025462	ptrh1	99	77.174	ENSMAMG00000017386	ptrh1	99	77.174	Mastacembelus_armatus
ENSACLG00000025462	ptrh1	100	98.814	ENSMZEG00005020001	ptrh1	100	98.814	Maylandia_zebra
ENSACLG00000025462	ptrh1	75	56.545	ENSMAUG00000006266	Ptrh1	86	58.857	Mesocricetus_auratus
ENSACLG00000025462	ptrh1	73	56.522	ENSMICG00000005611	PTRH1	79	58.824	Microcebus_murinus
ENSACLG00000025462	ptrh1	72	58.791	ENSMOCG00000013992	Ptrh1	86	58.857	Microtus_ochrogaster
ENSACLG00000025462	ptrh1	99	78.909	ENSMMOG00000014747	ptrh1	97	78.909	Mola_mola
ENSACLG00000025462	ptrh1	78	54.822	ENSMODG00000005503	PTRH1	80	56.322	Monodelphis_domestica
ENSACLG00000025462	ptrh1	66	76.647	ENSMALG00000005392	ptrh1	96	74.251	Monopterus_albus
ENSACLG00000025462	ptrh1	72	58.242	MGP_CAROLIEiJ_G0023450	Ptrh1	86	58.286	Mus_caroli
ENSACLG00000025462	ptrh1	72	58.242	ENSMUSG00000053746	Ptrh1	86	58.286	Mus_musculus
ENSACLG00000025462	ptrh1	72	58.242	MGP_PahariEiJ_G0024907	Ptrh1	86	58.286	Mus_pahari
ENSACLG00000025462	ptrh1	72	57.692	MGP_SPRETEiJ_G0024367	Ptrh1	86	57.714	Mus_spretus
ENSACLG00000025462	ptrh1	73	53.226	ENSMPUG00000013790	PTRH1	80	55.233	Mustela_putorius_furo
ENSACLG00000025462	ptrh1	73	52.551	ENSMLUG00000013454	PTRH1	82	54.696	Myotis_lucifugus
ENSACLG00000025462	ptrh1	73	56.522	ENSNGAG00000014008	Ptrh1	85	57.803	Nannospalax_galili
ENSACLG00000025462	ptrh1	100	99.283	ENSNBRG00000015590	ptrh1	100	99.283	Neolamprologus_brichardi
ENSACLG00000025462	ptrh1	76	55.959	ENSNLEG00000017468	PTRH1	87	53.769	Nomascus_leucogenys
ENSACLG00000025462	ptrh1	75	57.368	ENSODEG00000004012	PTRH1	81	60.000	Octodon_degus
ENSACLG00000025462	ptrh1	96	96.296	ENSONIG00000013912	ptrh1	99	96.124	Oreochromis_niloticus
ENSACLG00000025462	ptrh1	75	55.556	ENSOANG00000011891	PTRH1	77	57.471	Ornithorhynchus_anatinus
ENSACLG00000025462	ptrh1	73	55.978	ENSOCUG00000006894	PTRH1	74	58.235	Oryctolagus_cuniculus
ENSACLG00000025462	ptrh1	81	54.106	ENSOGAG00000008094	PTRH1	86	58.659	Otolemur_garnettii
ENSACLG00000025462	ptrh1	73	53.061	ENSOARG00000011808	PTRH1	82	53.514	Ovis_aries
ENSACLG00000025462	ptrh1	76	55.959	ENSPPAG00000041782	PTRH1	87	53.769	Pan_paniscus
ENSACLG00000025462	ptrh1	79	52.500	ENSPPRG00000007889	PTRH1	82	56.897	Panthera_pardus
ENSACLG00000025462	ptrh1	76	55.959	ENSPTRG00000021394	PTRH1	87	53.769	Pan_troglodytes
ENSACLG00000025462	ptrh1	80	44.248	ENSPANG00000031755	PTRH1	88	45.320	Papio_anubis
ENSACLG00000025462	ptrh1	94	59.833	ENSPKIG00000005449	ptrh1	78	59.833	Paramormyrops_kingsleyae
ENSACLG00000025462	ptrh1	87	48.472	ENSPSIG00000013828	PTRH1	71	52.500	Pelodiscus_sinensis
ENSACLG00000025462	ptrh1	77	67.179	ENSPMGG00000002148	ptrh1	92	56.296	Periophthalmus_magnuspinnatus
ENSACLG00000025462	ptrh1	66	61.310	ENSPEMG00000014360	Ptrh1	86	60.000	Peromyscus_maniculatus_bairdii
ENSACLG00000025462	ptrh1	98	77.372	ENSPFOG00000003715	ptrh1	99	77.372	Poecilia_formosa
ENSACLG00000025462	ptrh1	98	74.359	ENSPLAG00000023354	ptrh1	99	74.359	Poecilia_latipinna
ENSACLG00000025462	ptrh1	98	77.372	ENSPMEG00000000447	ptrh1	99	77.372	Poecilia_mexicana
ENSACLG00000025462	ptrh1	98	75.912	ENSPREG00000012612	ptrh1	99	74.088	Poecilia_reticulata
ENSACLG00000025462	ptrh1	80	49.550	ENSPPYG00000019628	PTRH1	81	51.256	Pongo_abelii
ENSACLG00000025462	ptrh1	75	56.021	ENSPCAG00000007016	PTRH1	79	59.412	Procavia_capensis
ENSACLG00000025462	ptrh1	76	55.959	ENSPCOG00000014541	PTRH1	83	58.101	Propithecus_coquereli
ENSACLG00000025462	ptrh1	73	57.609	ENSPVAG00000000954	PTRH1	84	55.208	Pteropus_vampyrus
ENSACLG00000025462	ptrh1	100	98.208	ENSPNYG00000007789	ptrh1	100	98.208	Pundamilia_nyererei
ENSACLG00000025462	ptrh1	96	63.374	ENSPNAG00000029930	ptrh1	97	58.333	Pygocentrus_nattereri
ENSACLG00000025462	ptrh1	72	59.341	ENSRNOG00000049034	Ptrh1	86	59.429	Rattus_norvegicus
ENSACLG00000025462	ptrh1	80	52.703	ENSRBIG00000027290	PTRH1	87	54.774	Rhinopithecus_bieti
ENSACLG00000025462	ptrh1	80	52.703	ENSRROG00000028799	PTRH1	82	54.774	Rhinopithecus_roxellana
ENSACLG00000025462	ptrh1	71	34.392	YHR189W	PTH1	91	35.227	Saccharomyces_cerevisiae
ENSACLG00000025462	ptrh1	76	56.477	ENSSBOG00000026699	PTRH1	79	55.208	Saimiri_boliviensis_boliviensis
ENSACLG00000025462	ptrh1	71	56.522	ENSSHAG00000018238	PTRH1	85	56.897	Sarcophilus_harrisii
ENSACLG00000025462	ptrh1	81	64.078	ENSSFOG00015007053	ptrh1	87	67.797	Scleropages_formosus
ENSACLG00000025462	ptrh1	78	79.000	ENSSMAG00000016747	ptrh1	85	79.000	Scophthalmus_maximus
ENSACLG00000025462	ptrh1	96	78.601	ENSSDUG00000013471	ptrh1	100	83.600	Seriola_dumerili
ENSACLG00000025462	ptrh1	85	83.721	ENSSLDG00000024662	ptrh1	95	82.569	Seriola_lalandi_dorsalis
ENSACLG00000025462	ptrh1	75	53.968	ENSSPUG00000000040	PTRH1	83	51.485	Sphenodon_punctatus
ENSACLG00000025462	ptrh1	90	82.379	ENSSPAG00000003298	ptrh1	98	78.629	Stegastes_partitus
ENSACLG00000025462	ptrh1	76	56.995	ENSSSCG00000005615	PTRH1	86	54.592	Sus_scrofa
ENSACLG00000025462	ptrh1	53	58.955	ENSTGUG00000003648	PTRH1	100	58.955	Taeniopygia_guttata
ENSACLG00000025462	ptrh1	95	76.136	ENSTRUG00000019801	PTRH1	99	72.464	Takifugu_rubripes
ENSACLG00000025462	ptrh1	89	75.893	ENSTNIG00000016735	ptrh1	99	75.893	Tetraodon_nigroviridis
ENSACLG00000025462	ptrh1	75	51.579	ENSTTRG00000016458	PTRH1	85	51.042	Tursiops_truncatus
ENSACLG00000025462	ptrh1	75	54.737	ENSUAMG00000023948	-	77	58.235	Ursus_americanus
ENSACLG00000025462	ptrh1	72	45.902	ENSVPAG00000001805	PTRH1	88	46.875	Vicugna_pacos
ENSACLG00000025462	ptrh1	73	55.435	ENSVVUG00000013198	PTRH1	77	57.647	Vulpes_vulpes
ENSACLG00000025462	ptrh1	70	55.932	ENSXETG00000009980	ptrh1	89	57.485	Xenopus_tropicalis
ENSACLG00000025462	ptrh1	81	80.097	ENSXCOG00000011498	ptrh1	86	80.097	Xiphophorus_couchianus
ENSACLG00000025462	ptrh1	95	77.358	ENSXMAG00000009256	ptrh1	98	75.472	Xiphophorus_maculatus