EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000025652 (Gene tree)
Gene ID: 113023892
Gene Symbol: RBM20
Alias: -
Full Name: RNA binding motif protein 20
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 47869 bases
Position: chr6:12012388-12060256
Accession: 113023892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000037977	zf-met	PF12874.7	0.00016	1	1
ENSACLP00000037954	zf-met	PF12874.7	0.00017	1	1
ENSACLP00000037931	zf-met	PF12874.7	0.00018	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000038863	RBM20-203	5303	-	ENSACLP00000037977	1105 (aa)	-	-
ENSACLT00000038817	RBM20-201	5614	-	ENSACLP00000037931	1184 (aa)	-	-
ENSACLT00000038840	RBM20-202	5491	XM_026170336	ENSACLP00000037954	1143 (aa)	XP_026026121	UPI000E42A026

Gene Model

Click here to download ENSACLG00000025652's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000025652's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000025652	RBM20	88	79.048	ENSAPOG00000011327	RBM20	99	79.758	Acanthochromis_polyacanthus
ENSACLG00000025652	RBM20	82	91.228	ENSACIG00000016368	RBM20	96	91.228	Amphilophus_citrinellus
ENSACLG00000025652	RBM20	100	78.347	ENSAOCG00000018378	RBM20	100	77.672	Amphiprion_ocellaris
ENSACLG00000025652	RBM20	80	87.719	ENSATEG00000008782	RBM20	96	87.719	Anabas_testudineus
ENSACLG00000025652	RBM20	100	51.911	ENSELUG00000022906	RBM20	100	52.824	Esox_lucius
ENSACLG00000025652	RBM20	100	98.863	ENSHBUG00000016743	RBM20	100	98.863	Haplochromis_burtoni
ENSACLG00000025652	RBM20	99	68.149	ENSKMAG00000020318	RBM20	99	68.125	Kryptolebias_marmoratus
ENSACLG00000025652	RBM20	79	75.000	ENSLACG00000012822	RBM20	80	75.000	Latimeria_chalumnae
ENSACLG00000025652	RBM20	99	71.635	ENSMAMG00000014492	RBM20	100	71.517	Mastacembelus_armatus
ENSACLG00000025652	RBM20	100	99.563	ENSMZEG00005003037	RBM20	100	99.563	Maylandia_zebra
ENSACLG00000025652	RBM20	86	70.000	ENSMMOG00000021599	RBM20	95	70.000	Mola_mola
ENSACLG00000025652	RBM20	82	77.143	ENSMODG00000010399	RBM20	74	77.143	Monodelphis_domestica
ENSACLG00000025652	RBM20	100	97.467	ENSNBRG00000003302	RBM20	100	97.467	Neolamprologus_brichardi
ENSACLG00000025652	RBM20	96	89.086	ENSONIG00000016294	RBM20	100	89.086	Oreochromis_niloticus
ENSACLG00000025652	RBM20	99	46.727	ENSPKIG00000017337	RBM20	100	47.412	Paramormyrops_kingsleyae
ENSACLG00000025652	RBM20	100	99.213	ENSPNYG00000002118	RBM20	100	99.213	Pundamilia_nyererei
ENSACLG00000025652	RBM20	100	73.741	ENSSMAG00000001397	RBM20	100	73.130	Scophthalmus_maximus
ENSACLG00000025652	RBM20	100	76.736	ENSSDUG00000010084	RBM20	97	76.513	Seriola_dumerili
ENSACLG00000025652	RBM20	100	77.187	ENSSLDG00000012344	RBM20	100	76.722	Seriola_lalandi_dorsalis
ENSACLG00000025652	RBM20	100	78.198	ENSSPAG00000005114	RBM20	100	77.962	Stegastes_partitus