EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000025699 (Gene tree)
Gene ID: 113031643
Gene Symbol: vars
Alias: CHUNP6879|im:7137378|vars2|wu:fb07a11|wu:fb07d10
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 14995 bases
Position: chr11:23208403-23223397
Accession: 113031643
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000038055	tRNA-synt_1g	PF09334.11	5.7e-13	1	1
ENSACLP00000038055	Anticodon_1	PF08264.13	3.9e-36	1	1
ENSACLP00000038055	tRNA-synt_1	PF00133.22	6.3e-207	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000038943	-	3966	XM_026183918	ENSACLP00000038055	1321 (aa)	XP_026039703	-

Gene Model

Click here to download ENSACLG00000025699's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000025699's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000025699	vars	79	47.526	ENSACLG00000018673	vars2	93	49.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000025699	vars	97	64.646	ENSG00000204394	VARS	99	71.779	Homo_sapiens
ENSACLG00000025699	vars	92	91.215	ENSAPOG00000020921	vars	97	91.215	Acanthochromis_polyacanthus
ENSACLG00000025699	vars	92	91.215	ENSAPOG00000020691	vars	97	91.215	Acanthochromis_polyacanthus
ENSACLG00000025699	vars	97	64.752	ENSAMEG00000006417	VARS	100	64.811	Ailuropoda_melanoleuca
ENSACLG00000025699	vars	97	93.427	ENSACIG00000013752	vars	100	93.427	Amphilophus_citrinellus
ENSACLG00000025699	vars	98	91.628	ENSAOCG00000002447	vars	100	91.628	Amphiprion_ocellaris
ENSACLG00000025699	vars	98	91.550	ENSAPEG00000010638	vars	100	91.550	Amphiprion_percula
ENSACLG00000025699	vars	97	87.334	ENSATEG00000020219	vars	100	87.334	Anabas_testudineus
ENSACLG00000025699	vars	87	72.049	ENSACAG00000029133	-	99	72.049	Anolis_carolinensis
ENSACLG00000025699	vars	97	64.646	ENSANAG00000015453	VARS	100	64.884	Aotus_nancymaae
ENSACLG00000025699	vars	93	80.245	ENSAMXG00000017716	vars	96	80.245	Astyanax_mexicanus
ENSACLG00000025699	vars	97	64.957	ENSBTAG00000005631	VARS	100	65.194	Bos_taurus
ENSACLG00000025699	vars	97	64.491	ENSCJAG00000002604	VARS	100	64.729	Callithrix_jacchus
ENSACLG00000025699	vars	97	64.491	ENSCAFG00000000636	VARS	100	64.551	Canis_familiaris
ENSACLG00000025699	vars	91	65.783	ENSCAFG00020020790	VARS	96	65.842	Canis_lupus_dingo
ENSACLG00000025699	vars	97	65.035	ENSCHIG00000011008	VARS	100	65.271	Capra_hircus
ENSACLG00000025699	vars	97	64.413	ENSTSYG00000001567	VARS	100	64.651	Carlito_syrichta
ENSACLG00000025699	vars	87	67.931	ENSCAPG00000013736	VARS	98	67.786	Cavia_aperea
ENSACLG00000025699	vars	97	64.546	ENSCPOG00000000870	VARS	100	64.264	Cavia_porcellus
ENSACLG00000025699	vars	97	64.701	ENSCCAG00000035656	VARS	100	64.934	Cebus_capucinus
ENSACLG00000025699	vars	97	64.806	ENSCATG00000022394	VARS	100	65.116	Cercocebus_atys
ENSACLG00000025699	vars	89	63.584	ENSCLAG00000009470	VARS	97	63.369	Chinchilla_lanigera
ENSACLG00000025699	vars	97	64.651	ENSCSAG00000008784	VARS	100	64.961	Chlorocebus_sabaeus
ENSACLG00000025699	vars	74	74.438	ENSCPBG00000007943	VARS	96	74.438	Chrysemys_picta_bellii
ENSACLG00000025699	vars	97	64.806	ENSCANG00000033570	VARS	100	65.116	Colobus_angolensis_palliatus
ENSACLG00000025699	vars	97	64.025	ENSCGRG00001005686	Vars	100	64.341	Cricetulus_griseus_chok1gshd
ENSACLG00000025699	vars	90	62.038	ENSCGRG00000013352	Vars	78	62.377	Cricetulus_griseus_crigri
ENSACLG00000025699	vars	97	82.929	ENSCSEG00000019652	vars	100	82.929	Cynoglossus_semilaevis
ENSACLG00000025699	vars	97	91.928	ENSCVAG00000022398	vars	100	91.928	Cyprinodon_variegatus
ENSACLG00000025699	vars	97	84.182	ENSDARG00000044575	vars	100	84.182	Danio_rerio
ENSACLG00000025699	vars	79	70.342	ENSDORG00000016433	Vars	94	70.427	Dipodomys_ordii
ENSACLG00000025699	vars	66	74.088	ENSETEG00000003824	VARS	76	74.088	Echinops_telfairi
ENSACLG00000025699	vars	55	65.253	ENSEBUG00000004637	vars	100	65.253	Eptatretus_burgeri
ENSACLG00000025699	vars	97	65.190	ENSEASG00005015673	VARS	100	65.426	Equus_asinus_asinus
ENSACLG00000025699	vars	97	64.984	ENSECAG00000014620	VARS	100	65.143	Equus_caballus
ENSACLG00000025699	vars	69	71.178	ENSEEUG00000004116	VARS	73	71.178	Erinaceus_europaeus
ENSACLG00000025699	vars	98	83.744	ENSELUG00000006550	vars	99	83.641	Esox_lucius
ENSACLG00000025699	vars	97	64.802	ENSFCAG00000004510	VARS	100	64.961	Felis_catus
ENSACLG00000025699	vars	80	69.664	ENSFDAG00000011401	VARS	100	69.299	Fukomys_damarensis
ENSACLG00000025699	vars	97	90.125	ENSFHEG00000010672	vars	100	90.125	Fundulus_heteroclitus
ENSACLG00000025699	vars	97	81.620	ENSGMOG00000014908	vars	100	81.620	Gadus_morhua
ENSACLG00000025699	vars	97	91.223	ENSGAFG00000021630	vars	100	91.223	Gambusia_affinis
ENSACLG00000025699	vars	90	90.596	ENSGACG00000009601	vars	100	86.228	Gasterosteus_aculeatus
ENSACLG00000025699	vars	97	64.884	ENSGGOG00000011364	VARS	100	65.194	Gorilla_gorilla
ENSACLG00000025699	vars	100	99.621	ENSHBUG00000017151	vars	100	99.621	Haplochromis_burtoni
ENSACLG00000025699	vars	97	64.386	ENSHGLG00000011646	VARS	100	64.386	Heterocephalus_glaber_female
ENSACLG00000025699	vars	90	60.934	ENSHGLG00100018062	VARS	99	60.855	Heterocephalus_glaber_male
ENSACLG00000025699	vars	97	85.513	ENSHCOG00000012198	vars	99	85.692	Hippocampus_comes
ENSACLG00000025699	vars	97	83.125	ENSIPUG00000005218	vars	100	83.203	Ictalurus_punctatus
ENSACLG00000025699	vars	97	65.035	ENSSTOG00000013112	VARS	100	64.961	Ictidomys_tridecemlineatus
ENSACLG00000025699	vars	97	52.771	ENSJJAG00000015343	-	98	54.739	Jaculus_jaculus
ENSACLG00000025699	vars	97	64.341	ENSJJAG00000019749	-	100	64.103	Jaculus_jaculus
ENSACLG00000025699	vars	97	87.461	ENSKMAG00000009455	vars	100	87.461	Kryptolebias_marmoratus
ENSACLG00000025699	vars	97	87.500	ENSLBEG00000010341	vars	99	87.500	Labrus_bergylta
ENSACLG00000025699	vars	91	66.530	ENSLACG00000015232	VARS	99	66.749	Latimeria_chalumnae
ENSACLG00000025699	vars	97	75.352	ENSLOCG00000004240	vars	100	75.587	Lepisosteus_oculatus
ENSACLG00000025699	vars	97	64.697	ENSLAFG00000023090	VARS	100	64.697	Loxodonta_africana
ENSACLG00000025699	vars	97	64.651	ENSMFAG00000001032	VARS	100	64.961	Macaca_fascicularis
ENSACLG00000025699	vars	97	64.651	ENSMMUG00000006828	VARS	100	64.961	Macaca_mulatta
ENSACLG00000025699	vars	97	64.651	ENSMNEG00000042072	VARS	100	64.961	Macaca_nemestrina
ENSACLG00000025699	vars	97	64.729	ENSMLEG00000039307	VARS	100	65.039	Mandrillus_leucophaeus
ENSACLG00000025699	vars	97	90.831	ENSMAMG00000003949	vars	100	90.831	Mastacembelus_armatus
ENSACLG00000025699	vars	100	99.849	ENSMZEG00005018327	vars	100	99.849	Maylandia_zebra
ENSACLG00000025699	vars	97	63.869	ENSMAUG00000006715	Vars	100	64.186	Mesocricetus_auratus
ENSACLG00000025699	vars	97	64.856	ENSMICG00000003548	VARS	100	64.651	Microcebus_murinus
ENSACLG00000025699	vars	97	63.219	ENSMOCG00000015404	Vars	100	63.333	Microtus_ochrogaster
ENSACLG00000025699	vars	97	87.147	ENSMMOG00000015801	vars	100	87.147	Mola_mola
ENSACLG00000025699	vars	97	65.194	ENSMODG00000015204	-	100	65.116	Monodelphis_domestica
ENSACLG00000025699	vars	97	90.603	ENSMALG00000022532	vars	99	90.603	Monopterus_albus
ENSACLG00000025699	vars	97	64.852	MGP_CAROLIEiJ_G0021491	Vars	100	64.961	Mus_caroli
ENSACLG00000025699	vars	97	64.697	ENSMUSG00000007029	Vars	100	64.806	Mus_musculus
ENSACLG00000025699	vars	97	64.619	MGP_PahariEiJ_G0020486	Vars	100	64.619	Mus_pahari
ENSACLG00000025699	vars	97	64.774	MGP_SPRETEiJ_G0022396	Vars	100	64.884	Mus_spretus
ENSACLG00000025699	vars	97	64.569	ENSMPUG00000010821	VARS	100	64.628	Mustela_putorius_furo
ENSACLG00000025699	vars	75	67.825	ENSMLUG00000013126	VARS	100	67.723	Myotis_lucifugus
ENSACLG00000025699	vars	97	64.463	ENSNGAG00000012151	Vars	100	64.546	Nannospalax_galili
ENSACLG00000025699	vars	97	99.373	ENSNBRG00000020520	vars	100	99.373	Neolamprologus_brichardi
ENSACLG00000025699	vars	97	64.724	ENSNLEG00000006351	VARS	100	64.961	Nomascus_leucogenys
ENSACLG00000025699	vars	91	71.944	ENSMEUG00000011378	VARS	100	63.219	Notamacropus_eugenii
ENSACLG00000025699	vars	97	64.880	ENSOPRG00000003607	VARS	100	65.194	Ochotona_princeps
ENSACLG00000025699	vars	97	63.764	ENSODEG00000017681	VARS	100	63.686	Octodon_degus
ENSACLG00000025699	vars	97	97.192	ENSONIG00000013064	vars	100	99.129	Oreochromis_niloticus
ENSACLG00000025699	vars	75	67.292	ENSOANG00000005400	VARS	98	67.213	Ornithorhynchus_anatinus
ENSACLG00000025699	vars	97	63.219	ENSOCUG00000022463	VARS	100	62.954	Oryctolagus_cuniculus
ENSACLG00000025699	vars	97	89.416	ENSORLG00000013063	vars	100	89.572	Oryzias_latipes
ENSACLG00000025699	vars	97	90.070	ENSORLG00020003504	vars	100	90.149	Oryzias_latipes_hni
ENSACLG00000025699	vars	97	90.297	ENSORLG00015009001	vars	100	90.297	Oryzias_latipes_hsok
ENSACLG00000025699	vars	97	90.532	ENSOMEG00000015016	vars	100	90.532	Oryzias_melastigma
ENSACLG00000025699	vars	97	64.491	ENSOGAG00000007515	VARS	100	64.396	Otolemur_garnettii
ENSACLG00000025699	vars	97	64.646	ENSPPAG00000034012	VARS	100	64.884	Pan_paniscus
ENSACLG00000025699	vars	97	64.802	ENSPPRG00000014855	VARS	100	64.961	Panthera_pardus
ENSACLG00000025699	vars	82	68.928	ENSPTIG00000010462	VARS	94	68.592	Panthera_tigris_altaica
ENSACLG00000025699	vars	97	64.569	ENSPTRG00000017985	VARS	100	64.806	Pan_troglodytes
ENSACLG00000025699	vars	97	63.174	ENSPANG00000014565	VARS	100	63.482	Papio_anubis
ENSACLG00000025699	vars	97	81.323	ENSPKIG00000016304	vars	100	81.323	Paramormyrops_kingsleyae
ENSACLG00000025699	vars	97	83.542	ENSPMGG00000023909	vars	100	83.542	Periophthalmus_magnuspinnatus
ENSACLG00000025699	vars	97	64.258	ENSPEMG00000006639	Vars	100	64.574	Peromyscus_maniculatus_bairdii
ENSACLG00000025699	vars	97	64.729	ENSPCIG00000018553	VARS	100	64.806	Phascolarctos_cinereus
ENSACLG00000025699	vars	97	91.144	ENSPFOG00000015690	vars	100	91.144	Poecilia_formosa
ENSACLG00000025699	vars	97	90.987	ENSPLAG00000009590	vars	100	90.987	Poecilia_latipinna
ENSACLG00000025699	vars	97	91.066	ENSPMEG00000004708	vars	100	91.066	Poecilia_mexicana
ENSACLG00000025699	vars	97	85.893	ENSPREG00000013264	vars	100	86.285	Poecilia_reticulata
ENSACLG00000025699	vars	97	63.326	ENSPPYG00000016460	VARS	100	63.158	Pongo_abelii
ENSACLG00000025699	vars	83	65.897	ENSPCAG00000013565	VARS	86	65.897	Procavia_capensis
ENSACLG00000025699	vars	97	64.674	ENSPCOG00000010942	VARS	100	64.833	Propithecus_coquereli
ENSACLG00000025699	vars	97	62.607	ENSPVAG00000012403	VARS	100	62.946	Pteropus_vampyrus
ENSACLG00000025699	vars	97	99.843	ENSPNYG00000022511	vars	100	99.843	Pundamilia_nyererei
ENSACLG00000025699	vars	97	83.763	ENSPNAG00000020962	vars	100	83.997	Pygocentrus_nattereri
ENSACLG00000025699	vars	97	64.569	ENSRNOG00000000867	Vars	100	64.396	Rattus_norvegicus
ENSACLG00000025699	vars	97	64.729	ENSRBIG00000041669	VARS	100	65.039	Rhinopithecus_bieti
ENSACLG00000025699	vars	97	64.729	ENSRROG00000045490	VARS	100	65.039	Rhinopithecus_roxellana
ENSACLG00000025699	vars	97	64.336	ENSSBOG00000035402	VARS	100	64.574	Saimiri_boliviensis_boliviensis
ENSACLG00000025699	vars	97	64.280	ENSSHAG00000006937	VARS	100	64.313	Sarcophilus_harrisii
ENSACLG00000025699	vars	97	80.826	ENSSFOG00015014272	vars	99	85.569	Scleropages_formosus
ENSACLG00000025699	vars	97	89.437	ENSSMAG00000009596	vars	99	89.437	Scophthalmus_maximus
ENSACLG00000025699	vars	97	92.723	ENSSDUG00000014177	vars	100	92.723	Seriola_dumerili
ENSACLG00000025699	vars	97	92.488	ENSSLDG00000025316	vars	100	92.488	Seriola_lalandi_dorsalis
ENSACLG00000025699	vars	97	91.223	ENSSPAG00000017068	vars	100	91.458	Stegastes_partitus
ENSACLG00000025699	vars	97	64.286	ENSSSCG00000038950	VARS	100	64.446	Sus_scrofa
ENSACLG00000025699	vars	79	81.506	ENSTRUG00000012307	vars	98	81.481	Takifugu_rubripes
ENSACLG00000025699	vars	97	86.854	ENSTNIG00000008011	vars	100	86.854	Tetraodon_nigroviridis
ENSACLG00000025699	vars	97	58.929	ENSTTRG00000014128	VARS	100	58.929	Tursiops_truncatus
ENSACLG00000025699	vars	97	63.101	ENSUAMG00000010424	VARS	100	63.166	Ursus_americanus
ENSACLG00000025699	vars	97	59.182	ENSUMAG00000013486	VARS	98	64.253	Ursus_maritimus
ENSACLG00000025699	vars	97	64.546	ENSVVUG00000021323	VARS	100	64.369	Vulpes_vulpes
ENSACLG00000025699	vars	97	64.469	ENSXETG00000024076	vars	100	64.424	Xenopus_tropicalis
ENSACLG00000025699	vars	97	88.636	ENSXCOG00000019172	vars	100	88.636	Xiphophorus_couchianus
ENSACLG00000025699	vars	97	91.144	ENSXMAG00000010927	vars	100	91.144	Xiphophorus_maculatus