EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000025717 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 978 bases
Position: chrLS419804.1:414636-415613
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000038044	RVT_1	PF00078.27	4.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000038933	-	978	-	ENSACLP00000038044	325 (aa)	-	-

Gene Model

Click here to download ENSACLG00000025717's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000025717's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000025717	-	57	37.500	ENSACLG00000012369	-	65	37.500
ENSACLG00000025717	-	69	33.190	ENSACLG00000014736	-	94	33.190
ENSACLG00000025717	-	91	86.424	ENSACLG00000005315	-	66	86.424
ENSACLG00000025717	-	85	38.380	ENSACLG00000010837	-	69	38.380
ENSACLG00000025717	-	80	40.149	ENSACLG00000019432	-	60	40.149
ENSACLG00000025717	-	97	36.137	ENSACLG00000003896	-	57	36.137
ENSACLG00000025717	-	71	33.333	ENSACLG00000017900	-	94	33.333
ENSACLG00000025717	-	97	35.093	ENSACLG00000024620	-	78	35.093

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000025717	-	76	37.500	ENSAPEG00000021324	-	60	37.500	Amphiprion_percula
ENSACLG00000025717	-	88	41.695	ENSCVAG00000009961	-	58	41.695	Cyprinodon_variegatus
ENSACLG00000025717	-	58	34.184	ENSFHEG00000020514	-	85	34.184	Fundulus_heteroclitus
ENSACLG00000025717	-	78	42.748	ENSFHEG00000014931	-	50	42.748	Fundulus_heteroclitus
ENSACLG00000025717	-	71	32.636	ENSHBUG00000003593	-	93	32.636	Haplochromis_burtoni
ENSACLG00000025717	-	85	37.762	ENSHBUG00000015481	-	72	37.762	Haplochromis_burtoni
ENSACLG00000025717	-	79	36.803	ENSLBEG00000022922	-	87	36.803	Labrus_bergylta
ENSACLG00000025717	-	86	32.746	ENSLBEG00000023571	-	84	32.746	Labrus_bergylta
ENSACLG00000025717	-	82	37.545	ENSLBEG00000015744	-	99	37.545	Labrus_bergylta
ENSACLG00000025717	-	81	39.259	ENSLBEG00000012683	-	68	39.259	Labrus_bergylta
ENSACLG00000025717	-	80	32.463	ENSMZEG00005014401	-	76	32.463	Maylandia_zebra
ENSACLG00000025717	-	71	32.906	ENSMZEG00005015360	-	94	32.906	Maylandia_zebra
ENSACLG00000025717	-	69	33.476	ENSMMOG00000014893	-	79	33.476	Mola_mola
ENSACLG00000025717	-	63	40.284	ENSNBRG00000008849	-	75	40.284	Neolamprologus_brichardi
ENSACLG00000025717	-	82	33.803	ENSONIG00000020621	-	83	33.803	Oreochromis_niloticus
ENSACLG00000025717	-	82	33.333	ENSORLG00000028717	-	61	33.333	Oryzias_latipes
ENSACLG00000025717	-	79	35.714	ENSORLG00020017190	-	62	35.714	Oryzias_latipes_hni
ENSACLG00000025717	-	96	38.080	ENSORLG00020005447	-	55	38.080	Oryzias_latipes_hni
ENSACLG00000025717	-	72	37.959	ENSORLG00015003246	-	91	37.959	Oryzias_latipes_hsok
ENSACLG00000025717	-	85	33.564	ENSORLG00015013361	-	73	33.564	Oryzias_latipes_hsok
ENSACLG00000025717	-	81	43.494	ENSPKIG00000004060	-	63	43.494	Paramormyrops_kingsleyae
ENSACLG00000025717	-	98	37.730	ENSPKIG00000013191	-	69	37.730	Paramormyrops_kingsleyae
ENSACLG00000025717	-	93	33.227	ENSPFOG00000024165	-	72	33.227	Poecilia_formosa
ENSACLG00000025717	-	73	37.705	ENSPLAG00000014995	-	86	37.705	Poecilia_latipinna
ENSACLG00000025717	-	86	56.835	ENSPMEG00000016120	-	98	56.835	Poecilia_mexicana
ENSACLG00000025717	-	68	31.602	ENSPREG00000004798	-	77	31.602	Poecilia_reticulata
ENSACLG00000025717	-	81	33.460	ENSPREG00000005467	-	79	33.460	Poecilia_reticulata
ENSACLG00000025717	-	66	33.929	ENSPNYG00000024140	-	93	33.929	Pundamilia_nyererei
ENSACLG00000025717	-	77	34.496	ENSPNYG00000010501	-	85	34.496	Pundamilia_nyererei
ENSACLG00000025717	-	97	37.309	ENSPNYG00000005142	-	69	37.309	Pundamilia_nyererei
ENSACLG00000025717	-	69	31.197	ENSXETG00000033469	-	96	31.197	Xenopus_tropicalis
ENSACLG00000025717	-	74	36.653	ENSXETG00000030237	-	96	36.653	Xenopus_tropicalis
ENSACLG00000025717	-	74	43.673	ENSXMAG00000026828	-	92	43.673	Xiphophorus_maculatus