EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000026296 (Gene tree)
Gene ID: 113026914
Gene Symbol: prpf18
Alias: zgc:91830
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 7850 bases
Position: chr7:59073717-59081566
Accession: 113026914
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000039011	PRP4	PF08799.11	1.3e-13	1	1
ENSACLP00000038977	PRP4	PF08799.11	1.4e-13	1	1
ENSACLP00000038996	PRP4	PF08799.11	3.2e-13	1	1
ENSACLP00000039011	Prp18	PF02840.15	1e-62	1	1
ENSACLP00000038977	Prp18	PF02840.15	2.4e-56	1	1
ENSACLP00000038996	Prp18	PF02840.15	2.4e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000039939	-	1026	-	ENSACLP00000039011	341 (aa)	XP_026031975	UPI000329DC3E
ENSACLT00000039906	-	4553	-	ENSACLP00000038977	340 (aa)	-	-
ENSACLT00000039924	-	4526	-	ENSACLP00000038996	331 (aa)	-	-

Gene Model

Click here to download ENSACLG00000026296's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000026296's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000026296	prpf18	100	85.088	ENSG00000165630	PRPF18	100	85.088	Homo_sapiens
ENSACLG00000026296	prpf18	100	94.721	ENSAPOG00000024177	prpf18	100	94.721	Acanthochromis_polyacanthus
ENSACLG00000026296	prpf18	100	84.503	ENSAMEG00000013591	-	100	84.503	Ailuropoda_melanoleuca
ENSACLG00000026296	prpf18	100	96.481	ENSACIG00000001186	prpf18	100	96.481	Amphilophus_citrinellus
ENSACLG00000026296	prpf18	98	94.910	ENSAOCG00000006572	prpf18	94	92.105	Amphiprion_ocellaris
ENSACLG00000026296	prpf18	100	95.015	ENSAPEG00000004564	prpf18	100	95.015	Amphiprion_percula
ENSACLG00000026296	prpf18	100	94.428	ENSATEG00000000303	prpf18	100	94.428	Anabas_testudineus
ENSACLG00000026296	prpf18	99	82.941	ENSAPLG00000003387	-	99	82.941	Anas_platyrhynchos
ENSACLG00000026296	prpf18	100	83.721	ENSACAG00000000818	-	100	83.721	Anolis_carolinensis
ENSACLG00000026296	prpf18	100	84.795	ENSANAG00000037445	-	100	84.795	Aotus_nancymaae
ENSACLG00000026296	prpf18	100	87.714	ENSAMXG00000012848	prpf18	100	87.714	Astyanax_mexicanus
ENSACLG00000026296	prpf18	100	84.211	ENSBTAG00000017244	PRPF18	100	84.211	Bos_taurus
ENSACLG00000026296	prpf18	98	40.517	WBGene00009320	F32B6.3	97	39.769	Caenorhabditis_elegans
ENSACLG00000026296	prpf18	100	84.795	ENSCJAG00000009432	-	100	84.795	Callithrix_jacchus
ENSACLG00000026296	prpf18	100	84.503	ENSCAFG00000004735	-	100	84.503	Canis_familiaris
ENSACLG00000026296	prpf18	100	84.503	ENSCAFG00020007712	-	100	84.503	Canis_lupus_dingo
ENSACLG00000026296	prpf18	100	84.211	ENSCHIG00000000499	-	100	84.211	Capra_hircus
ENSACLG00000026296	prpf18	100	84.795	ENSTSYG00000003517	-	100	84.795	Carlito_syrichta
ENSACLG00000026296	prpf18	100	85.088	ENSCPOG00000021069	-	100	85.088	Cavia_porcellus
ENSACLG00000026296	prpf18	100	84.795	ENSCCAG00000036822	-	100	84.795	Cebus_capucinus
ENSACLG00000026296	prpf18	100	74.561	ENSCATG00000016633	-	100	74.561	Cercocebus_atys
ENSACLG00000026296	prpf18	100	84.503	ENSCLAG00000011770	-	100	84.503	Chinchilla_lanigera
ENSACLG00000026296	prpf18	100	82.906	ENSCSAG00000013109	-	100	82.906	Chlorocebus_sabaeus
ENSACLG00000026296	prpf18	100	80.618	ENSCPBG00000003100	-	100	81.461	Chrysemys_picta_bellii
ENSACLG00000026296	prpf18	99	55.882	ENSCING00000020481	-	97	55.072	Ciona_intestinalis
ENSACLG00000026296	prpf18	99	56.105	ENSCSAVG00000010546	-	99	55.394	Ciona_savignyi
ENSACLG00000026296	prpf18	100	85.088	ENSCANG00000034900	-	100	85.088	Colobus_angolensis_palliatus
ENSACLG00000026296	prpf18	100	84.503	ENSCGRG00001023665	Prpf18	100	84.503	Cricetulus_griseus_chok1gshd
ENSACLG00000026296	prpf18	100	84.503	ENSCGRG00000014690	Prpf18	100	84.503	Cricetulus_griseus_crigri
ENSACLG00000026296	prpf18	100	89.736	ENSCSEG00000005536	prpf18	99	89.736	Cynoglossus_semilaevis
ENSACLG00000026296	prpf18	100	92.375	ENSCVAG00000012401	prpf18	100	92.375	Cyprinodon_variegatus
ENSACLG00000026296	prpf18	100	90.058	ENSDARG00000058306	prpf18	100	90.058	Danio_rerio
ENSACLG00000026296	prpf18	100	84.503	ENSDNOG00000035607	-	100	84.503	Dasypus_novemcinctus
ENSACLG00000026296	prpf18	100	84.211	ENSDORG00000000858	Prpf18	100	84.211	Dipodomys_ordii
ENSACLG00000026296	prpf18	99	51.775	FBgn0027784	Prp18	98	51.183	Drosophila_melanogaster
ENSACLG00000026296	prpf18	100	76.608	ENSETEG00000015060	-	100	76.608	Echinops_telfairi
ENSACLG00000026296	prpf18	100	70.605	ENSEBUG00000016502	prpf18	99	69.741	Eptatretus_burgeri
ENSACLG00000026296	prpf18	100	84.795	ENSEASG00005019373	-	100	84.795	Equus_asinus_asinus
ENSACLG00000026296	prpf18	100	84.795	ENSECAG00000006997	PRPF18	100	84.795	Equus_caballus
ENSACLG00000026296	prpf18	95	51.266	ENSEEUG00000001171	-	100	51.266	Erinaceus_europaeus
ENSACLG00000026296	prpf18	100	88.047	ENSELUG00000022190	prpf18	100	88.047	Esox_lucius
ENSACLG00000026296	prpf18	100	84.211	ENSFCAG00000004436	-	100	84.211	Felis_catus
ENSACLG00000026296	prpf18	97	78.679	ENSFALG00000001912	-	99	78.979	Ficedula_albicollis
ENSACLG00000026296	prpf18	94	86.562	ENSFDAG00000014026	-	100	86.562	Fukomys_damarensis
ENSACLG00000026296	prpf18	99	57.391	ENSFDAG00000010713	-	97	57.391	Fukomys_damarensis
ENSACLG00000026296	prpf18	80	94.872	ENSFHEG00000020125	prpf18	98	94.757	Fundulus_heteroclitus
ENSACLG00000026296	prpf18	99	86.765	ENSGMOG00000012210	prpf18	99	86.765	Gadus_morhua
ENSACLG00000026296	prpf18	100	83.918	ENSGALG00000043593	-	100	83.918	Gallus_gallus
ENSACLG00000026296	prpf18	100	92.082	ENSGAFG00000006034	prpf18	100	92.082	Gambusia_affinis
ENSACLG00000026296	prpf18	100	89.443	ENSGACG00000012232	prpf18	100	89.443	Gasterosteus_aculeatus
ENSACLG00000026296	prpf18	100	84.503	ENSGAGG00000016878	-	100	84.503	Gopherus_agassizii
ENSACLG00000026296	prpf18	95	83.912	ENSGGOG00000025188	-	97	83.912	Gorilla_gorilla
ENSACLG00000026296	prpf18	100	100.000	ENSHBUG00000010264	prpf18	100	100.000	Haplochromis_burtoni
ENSACLG00000026296	prpf18	100	84.503	ENSHGLG00000018534	PRPF18	100	84.503	Heterocephalus_glaber_female
ENSACLG00000026296	prpf18	94	86.250	ENSHGLG00100012161	-	98	86.250	Heterocephalus_glaber_male
ENSACLG00000026296	prpf18	100	94.135	ENSHCOG00000015987	prpf18	100	94.135	Hippocampus_comes
ENSACLG00000026296	prpf18	100	83.003	ENSIPUG00000007432	prpf18	100	83.853	Ictalurus_punctatus
ENSACLG00000026296	prpf18	100	84.503	ENSSTOG00000008735	-	100	84.503	Ictidomys_tridecemlineatus
ENSACLG00000026296	prpf18	100	62.974	ENSJJAG00000015191	-	100	62.974	Jaculus_jaculus
ENSACLG00000026296	prpf18	100	85.088	ENSJJAG00000024041	-	100	85.088	Jaculus_jaculus
ENSACLG00000026296	prpf18	100	92.962	ENSKMAG00000012124	prpf18	100	92.962	Kryptolebias_marmoratus
ENSACLG00000026296	prpf18	97	90.149	ENSLBEG00000028466	prpf18	99	90.149	Labrus_bergylta
ENSACLG00000026296	prpf18	100	84.211	ENSLACG00000009885	prpf18	100	85.088	Latimeria_chalumnae
ENSACLG00000026296	prpf18	100	88.596	ENSLOCG00000016736	prpf18	100	88.596	Lepisosteus_oculatus
ENSACLG00000026296	prpf18	100	85.088	ENSLAFG00000007753	-	100	85.088	Loxodonta_africana
ENSACLG00000026296	prpf18	100	85.088	ENSMFAG00000000540	-	100	85.088	Macaca_fascicularis
ENSACLG00000026296	prpf18	100	85.088	ENSMMUG00000015071	PRPF18	93	92.715	Macaca_mulatta
ENSACLG00000026296	prpf18	100	85.088	ENSMNEG00000024679	-	100	85.088	Macaca_nemestrina
ENSACLG00000026296	prpf18	100	69.883	ENSMLEG00000031715	-	91	80.377	Mandrillus_leucophaeus
ENSACLG00000026296	prpf18	100	93.548	ENSMAMG00000006610	prpf18	100	93.548	Mastacembelus_armatus
ENSACLG00000026296	prpf18	100	100.000	ENSMZEG00005019392	prpf18	100	100.000	Maylandia_zebra
ENSACLG00000026296	prpf18	100	83.918	ENSMGAG00000005023	-	100	83.918	Meleagris_gallopavo
ENSACLG00000026296	prpf18	100	84.795	ENSMICG00000006572	-	100	84.795	Microcebus_murinus
ENSACLG00000026296	prpf18	100	85.088	ENSMOCG00000021468	Prpf18	100	85.088	Microtus_ochrogaster
ENSACLG00000026296	prpf18	100	92.375	ENSMMOG00000013012	prpf18	100	92.375	Mola_mola
ENSACLG00000026296	prpf18	96	80.982	ENSMODG00000016902	-	91	80.982	Monodelphis_domestica
ENSACLG00000026296	prpf18	100	76.023	ENSMODG00000024043	-	100	76.023	Monodelphis_domestica
ENSACLG00000026296	prpf18	100	82.609	ENSMALG00000005486	prpf18	100	85.756	Monopterus_albus
ENSACLG00000026296	prpf18	100	84.503	MGP_CAROLIEiJ_G0023143	Prpf18	100	93.151	Mus_caroli
ENSACLG00000026296	prpf18	100	84.503	ENSMUSG00000039449	Prpf18	100	93.151	Mus_musculus
ENSACLG00000026296	prpf18	100	84.795	MGP_PahariEiJ_G0019203	Prpf18	100	93.151	Mus_pahari
ENSACLG00000026296	prpf18	100	84.795	MGP_SPRETEiJ_G0024061	Prpf18	100	93.151	Mus_spretus
ENSACLG00000026296	prpf18	100	84.211	ENSMPUG00000000938	-	100	84.211	Mustela_putorius_furo
ENSACLG00000026296	prpf18	100	84.211	ENSMLUG00000009200	-	100	84.211	Myotis_lucifugus
ENSACLG00000026296	prpf18	68	81.897	ENSNGAG00000023550	-	82	82.609	Nannospalax_galili
ENSACLG00000026296	prpf18	100	85.088	ENSNGAG00000012500	-	100	85.088	Nannospalax_galili
ENSACLG00000026296	prpf18	100	99.707	ENSNBRG00000001778	prpf18	100	99.707	Neolamprologus_brichardi
ENSACLG00000026296	prpf18	100	85.088	ENSNLEG00000012186	-	100	85.088	Nomascus_leucogenys
ENSACLG00000026296	prpf18	76	72.201	ENSMEUG00000005032	-	75	70.656	Notamacropus_eugenii
ENSACLG00000026296	prpf18	80	65.660	ENSOPRG00000002153	-	100	65.660	Ochotona_princeps
ENSACLG00000026296	prpf18	100	84.211	ENSODEG00000003770	-	100	84.211	Octodon_degus
ENSACLG00000026296	prpf18	98	98.503	ENSONIG00000014854	prpf18	96	98.503	Oreochromis_niloticus
ENSACLG00000026296	prpf18	100	84.211	ENSOANG00000015404	-	100	84.211	Ornithorhynchus_anatinus
ENSACLG00000026296	prpf18	100	84.795	ENSOCUG00000027756	-	96	85.321	Oryctolagus_cuniculus
ENSACLG00000026296	prpf18	100	90.286	ENSORLG00000010293	prpf18	100	90.286	Oryzias_latipes
ENSACLG00000026296	prpf18	100	92.962	ENSORLG00020001530	prpf18	100	92.962	Oryzias_latipes_hni
ENSACLG00000026296	prpf18	100	92.669	ENSORLG00015013705	prpf18	100	92.669	Oryzias_latipes_hsok
ENSACLG00000026296	prpf18	100	94.135	ENSOMEG00000009167	prpf18	100	94.135	Oryzias_melastigma
ENSACLG00000026296	prpf18	100	83.918	ENSOGAG00000007294	-	100	83.918	Otolemur_garnettii
ENSACLG00000026296	prpf18	100	82.051	ENSOARG00000006243	-	100	82.051	Ovis_aries
ENSACLG00000026296	prpf18	100	85.088	ENSPPAG00000041959	-	100	85.088	Pan_paniscus
ENSACLG00000026296	prpf18	100	84.211	ENSPPRG00000000107	-	100	84.211	Panthera_pardus
ENSACLG00000026296	prpf18	100	84.211	ENSPTIG00000021094	-	100	84.211	Panthera_tigris_altaica
ENSACLG00000026296	prpf18	100	85.088	ENSPTRG00000002306	PRPF18	100	85.088	Pan_troglodytes
ENSACLG00000026296	prpf18	100	84.795	ENSPANG00000023346	-	100	84.795	Papio_anubis
ENSACLG00000026296	prpf18	89	98.182	ENSPKIG00000014128	prpf18	96	85.470	Paramormyrops_kingsleyae
ENSACLG00000026296	prpf18	100	83.918	ENSPSIG00000016064	-	100	83.918	Pelodiscus_sinensis
ENSACLG00000026296	prpf18	100	85.088	ENSPMGG00000016486	prpf18	100	85.088	Periophthalmus_magnuspinnatus
ENSACLG00000026296	prpf18	100	84.795	ENSPEMG00000013704	Prpf18	100	84.795	Peromyscus_maniculatus_bairdii
ENSACLG00000026296	prpf18	100	73.623	ENSPMAG00000000204	prpf18	100	73.623	Petromyzon_marinus
ENSACLG00000026296	prpf18	95	83.281	ENSPCIG00000012963	-	99	83.281	Phascolarctos_cinereus
ENSACLG00000026296	prpf18	100	89.429	ENSPFOG00000017611	prpf18	100	89.429	Poecilia_formosa
ENSACLG00000026296	prpf18	100	91.789	ENSPLAG00000000369	prpf18	100	91.789	Poecilia_latipinna
ENSACLG00000026296	prpf18	100	92.082	ENSPMEG00000005183	prpf18	100	92.082	Poecilia_mexicana
ENSACLG00000026296	prpf18	100	91.496	ENSPREG00000015232	prpf18	100	91.496	Poecilia_reticulata
ENSACLG00000026296	prpf18	100	84.795	ENSPPYG00000002101	PRPF18	100	84.795	Pongo_abelii
ENSACLG00000026296	prpf18	100	67.251	ENSPCAG00000010833	-	100	67.251	Procavia_capensis
ENSACLG00000026296	prpf18	100	80.409	ENSPCOG00000013057	-	100	80.409	Propithecus_coquereli
ENSACLG00000026296	prpf18	100	51.754	ENSPVAG00000002947	-	100	51.754	Pteropus_vampyrus
ENSACLG00000026296	prpf18	100	99.707	ENSPNYG00000003554	prpf18	100	99.707	Pundamilia_nyererei
ENSACLG00000026296	prpf18	100	87.464	ENSPNAG00000023151	prpf18	100	87.464	Pygocentrus_nattereri
ENSACLG00000026296	prpf18	100	84.503	ENSRNOG00000018396	Prpf18	100	84.503	Rattus_norvegicus
ENSACLG00000026296	prpf18	100	84.795	ENSRBIG00000028028	-	100	84.795	Rhinopithecus_bieti
ENSACLG00000026296	prpf18	100	85.088	ENSRROG00000040695	-	100	85.088	Rhinopithecus_roxellana
ENSACLG00000026296	prpf18	100	84.795	ENSSBOG00000034482	-	100	84.795	Saimiri_boliviensis_boliviensis
ENSACLG00000026296	prpf18	100	84.211	ENSSHAG00000016463	-	100	84.211	Sarcophilus_harrisii
ENSACLG00000026296	prpf18	100	70.175	ENSSHAG00000009669	-	100	70.175	Sarcophilus_harrisii
ENSACLG00000026296	prpf18	98	85.217	ENSSFOG00015022118	prpf18	100	81.556	Scleropages_formosus
ENSACLG00000026296	prpf18	80	45.455	ENSSFOG00015021154	-	89	47.639	Scleropages_formosus
ENSACLG00000026296	prpf18	100	90.616	ENSSMAG00000005308	prpf18	100	90.616	Scophthalmus_maximus
ENSACLG00000026296	prpf18	100	95.308	ENSSDUG00000015428	prpf18	100	95.308	Seriola_dumerili
ENSACLG00000026296	prpf18	100	95.015	ENSSLDG00000023989	prpf18	100	95.015	Seriola_lalandi_dorsalis
ENSACLG00000026296	prpf18	100	56.725	ENSSARG00000005307	-	100	56.725	Sorex_araneus
ENSACLG00000026296	prpf18	100	84.211	ENSSPUG00000002619	-	100	84.211	Sphenodon_punctatus
ENSACLG00000026296	prpf18	100	94.428	ENSSPAG00000019502	prpf18	100	94.428	Stegastes_partitus
ENSACLG00000026296	prpf18	100	84.503	ENSSSCG00000026354	-	100	84.503	Sus_scrofa
ENSACLG00000026296	prpf18	100	83.333	ENSTGUG00000002286	-	100	83.333	Taeniopygia_guttata
ENSACLG00000026296	prpf18	100	88.856	ENSTRUG00000011278	prpf18	100	88.856	Takifugu_rubripes
ENSACLG00000026296	prpf18	100	89.736	ENSTNIG00000000911	prpf18	100	89.736	Tetraodon_nigroviridis
ENSACLG00000026296	prpf18	79	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSACLG00000026296	prpf18	100	85.380	ENSTTRG00000011117	PRPF18	100	85.380	Tursiops_truncatus
ENSACLG00000026296	prpf18	91	87.138	ENSUAMG00000001815	-	93	87.138	Ursus_americanus
ENSACLG00000026296	prpf18	100	79.825	ENSUMAG00000012329	-	100	79.825	Ursus_maritimus
ENSACLG00000026296	prpf18	100	78.947	ENSVPAG00000011486	-	100	78.947	Vicugna_pacos
ENSACLG00000026296	prpf18	100	84.503	ENSVVUG00000005453	-	100	84.503	Vulpes_vulpes
ENSACLG00000026296	prpf18	100	76.232	ENSXETG00000024057	prpf18	100	75.942	Xenopus_tropicalis
ENSACLG00000026296	prpf18	100	91.254	ENSXCOG00000020414	prpf18	100	91.254	Xiphophorus_couchianus
ENSACLG00000026296	prpf18	100	91.789	ENSXMAG00000004713	prpf18	91	91.789	Xiphophorus_maculatus