EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000026325 (Gene tree)
Gene ID: 113009382
Gene Symbol: cpsf6
Alias: wu:fa22f12|zgc:85819
Full Name: cleavage and polyadenylation specific factor 6
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 6497 bases
Position: chr17:28929996-28936492
Accession: 113009382
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000038998	RRM_1	PF00076.22	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000039926	-	1915	XM_026147645	ENSACLP00000038998	586 (aa)	XP_026003429	UPI000E40E8D7

Gene Model

Click here to download ENSACLG00000026325's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000026325's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000026325	cpsf6	77	85.441	ENSG00000111605	CPSF6	93	85.271	Homo_sapiens
ENSACLG00000026325	cpsf6	61	53.886	ENSG00000149532	CPSF7	100	48.667	Homo_sapiens
ENSACLG00000026325	cpsf6	60	49.246	ENSANAG00000024635	CPSF7	69	51.955	Aotus_nancymaae
ENSACLG00000026325	cpsf6	59	92.262	ENSAMXG00000016745	CPSF6	75	91.566	Astyanax_mexicanus
ENSACLG00000026325	cpsf6	61	54.404	ENSBTAG00000015263	CPSF7	71	57.225	Bos_taurus
ENSACLG00000026325	cpsf6	61	53.886	ENSCJAG00000019282	CPSF7	75	64.122	Callithrix_jacchus
ENSACLG00000026325	cpsf6	76	85.659	ENSCJAG00000001798	CPSF6	91	84.942	Callithrix_jacchus
ENSACLG00000026325	cpsf6	61	54.404	ENSCAFG00000016152	CPSF7	71	57.803	Canis_familiaris
ENSACLG00000026325	cpsf6	70	80.892	ENSCAFG00000000424	CPSF6	72	80.892	Canis_familiaris
ENSACLG00000026325	cpsf6	61	54.404	ENSCAFG00020012753	CPSF7	71	57.803	Canis_lupus_dingo
ENSACLG00000026325	cpsf6	61	54.404	ENSCHIG00000014655	CPSF7	71	57.225	Capra_hircus
ENSACLG00000026325	cpsf6	61	54.404	ENSTSYG00000010138	-	71	57.803	Carlito_syrichta
ENSACLG00000026325	cpsf6	76	84.170	ENSTSYG00000008591	CPSF6	90	84.942	Carlito_syrichta
ENSACLG00000026325	cpsf6	54	60.839	ENSCPOG00000009980	CPSF7	71	57.803	Cavia_porcellus
ENSACLG00000026325	cpsf6	76	84.170	ENSCCAG00000028149	CPSF6	91	84.231	Cebus_capucinus
ENSACLG00000026325	cpsf6	61	53.886	ENSCCAG00000032367	CPSF7	71	57.225	Cebus_capucinus
ENSACLG00000026325	cpsf6	61	53.886	ENSCATG00000042801	CPSF7	73	57.225	Cercocebus_atys
ENSACLG00000026325	cpsf6	77	83.846	ENSCATG00000039288	CPSF6	91	84.231	Cercocebus_atys
ENSACLG00000026325	cpsf6	54	60.839	ENSCLAG00000003174	CPSF7	71	57.225	Chinchilla_lanigera
ENSACLG00000026325	cpsf6	74	83.846	ENSCANG00000037294	CPSF6	89	84.231	Colobus_angolensis_palliatus
ENSACLG00000026325	cpsf6	61	54.922	ENSCGRG00001020382	Cpsf7	71	58.382	Cricetulus_griseus_chok1gshd
ENSACLG00000026325	cpsf6	64	54.922	ENSCGRG00000017954	Cpsf7	73	58.382	Cricetulus_griseus_crigri
ENSACLG00000026325	cpsf6	95	93.874	ENSCSEG00000008967	cpsf6	95	93.874	Cynoglossus_semilaevis
ENSACLG00000026325	cpsf6	95	90.811	ENSCVAG00000014857	cpsf6	95	90.811	Cyprinodon_variegatus
ENSACLG00000026325	cpsf6	61	54.404	ENSDNOG00000018517	CPSF7	75	64.885	Dasypus_novemcinctus
ENSACLG00000026325	cpsf6	65	80.645	ENSETEG00000002097	CPSF6	59	82.796	Echinops_telfairi
ENSACLG00000026325	cpsf6	61	50.000	ENSETEG00000003765	CPSF7	71	56.000	Echinops_telfairi
ENSACLG00000026325	cpsf6	85	62.914	ENSEBUG00000003540	cpsf6	67	79.167	Eptatretus_burgeri
ENSACLG00000026325	cpsf6	61	54.404	ENSEASG00005008196	CPSF7	71	57.803	Equus_asinus_asinus
ENSACLG00000026325	cpsf6	61	54.404	ENSFCAG00000013677	CPSF7	77	64.885	Felis_catus
ENSACLG00000026325	cpsf6	61	54.922	ENSFDAG00000003919	CPSF7	71	57.803	Fukomys_damarensis
ENSACLG00000026325	cpsf6	95	84.589	ENSFHEG00000019693	cpsf6	95	85.959	Fundulus_heteroclitus
ENSACLG00000026325	cpsf6	50	95.376	ENSGMOG00000012951	cpsf6	53	95.833	Gadus_morhua
ENSACLG00000026325	cpsf6	61	53.368	ENSGALG00000040962	CPSF7	63	56.647	Gallus_gallus
ENSACLG00000026325	cpsf6	77	83.846	ENSGGOG00000008211	CPSF6	91	84.231	Gorilla_gorilla
ENSACLG00000026325	cpsf6	100	99.659	ENSHBUG00000005998	cpsf6	100	99.659	Haplochromis_burtoni
ENSACLG00000026325	cpsf6	64	54.922	ENSHGLG00100013933	-	73	57.803	Heterocephalus_glaber_male
ENSACLG00000026325	cpsf6	95	86.250	ENSHCOG00000014555	cpsf6	95	86.071	Hippocampus_comes
ENSACLG00000026325	cpsf6	61	54.404	ENSSTOG00000007708	CPSF7	71	57.803	Ictidomys_tridecemlineatus
ENSACLG00000026325	cpsf6	55	93.146	ENSKMAG00000014794	cpsf6	95	93.153	Kryptolebias_marmoratus
ENSACLG00000026325	cpsf6	53	40.972	ENSLBEG00000000947	CPSF7	73	41.040	Labrus_bergylta
ENSACLG00000026325	cpsf6	95	90.764	ENSLBEG00000015762	cpsf6	95	88.632	Labrus_bergylta
ENSACLG00000026325	cpsf6	58	46.154	ENSLACG00000005542	CPSF7	69	46.154	Latimeria_chalumnae
ENSACLG00000026325	cpsf6	62	89.222	ENSLOCG00000016190	cpsf6	63	90.361	Lepisosteus_oculatus
ENSACLG00000026325	cpsf6	61	54.922	ENSLAFG00000032084	CPSF7	71	58.382	Loxodonta_africana
ENSACLG00000026325	cpsf6	61	53.886	ENSMFAG00000001401	CPSF7	71	57.225	Macaca_fascicularis
ENSACLG00000026325	cpsf6	77	83.846	ENSMFAG00000045318	CPSF6	91	84.231	Macaca_fascicularis
ENSACLG00000026325	cpsf6	61	53.886	ENSMMUG00000015280	CPSF7	73	57.225	Macaca_mulatta
ENSACLG00000026325	cpsf6	77	85.328	ENSMNEG00000036311	CPSF6	91	84.942	Macaca_nemestrina
ENSACLG00000026325	cpsf6	59	53.886	ENSMNEG00000029585	CPSF7	73	57.225	Macaca_nemestrina
ENSACLG00000026325	cpsf6	61	53.886	ENSMLEG00000031269	CPSF7	69	57.225	Mandrillus_leucophaeus
ENSACLG00000026325	cpsf6	74	83.846	ENSMLEG00000003957	CPSF6	89	84.231	Mandrillus_leucophaeus
ENSACLG00000026325	cpsf6	95	91.712	ENSMAMG00000010385	cpsf6	95	89.550	Mastacembelus_armatus
ENSACLG00000026325	cpsf6	100	99.829	ENSMZEG00005007975	cpsf6	100	99.829	Maylandia_zebra
ENSACLG00000026325	cpsf6	61	54.404	ENSMAUG00000013020	Cpsf7	71	57.803	Mesocricetus_auratus
ENSACLG00000026325	cpsf6	77	85.328	ENSMICG00000007385	-	91	84.942	Microcebus_murinus
ENSACLG00000026325	cpsf6	61	54.404	ENSMICG00000013788	CPSF7	71	57.803	Microcebus_murinus
ENSACLG00000026325	cpsf6	61	54.404	ENSMOCG00000000072	Cpsf7	71	57.803	Microtus_ochrogaster
ENSACLG00000026325	cpsf6	61	52.041	ENSMODG00000020364	CPSF7	72	56.818	Monodelphis_domestica
ENSACLG00000026325	cpsf6	70	95.855	ENSMALG00000014908	cpsf6	70	95.758	Monopterus_albus
ENSACLG00000026325	cpsf6	61	54.404	MGP_CAROLIEiJ_G0022690	Cpsf7	71	57.803	Mus_caroli
ENSACLG00000026325	cpsf6	61	54.404	ENSMUSG00000034820	Cpsf7	71	57.803	Mus_musculus
ENSACLG00000026325	cpsf6	61	54.404	MGP_PahariEiJ_G0014184	Cpsf7	71	57.803	Mus_pahari
ENSACLG00000026325	cpsf6	61	54.404	MGP_SPRETEiJ_G0023604	Cpsf7	71	57.803	Mus_spretus
ENSACLG00000026325	cpsf6	56	53.368	ENSMPUG00000014163	CPSF7	68	56.647	Mustela_putorius_furo
ENSACLG00000026325	cpsf6	68	78.261	ENSMLUG00000023960	-	73	76.744	Myotis_lucifugus
ENSACLG00000026325	cpsf6	63	90.580	ENSMLUG00000028728	-	85	80.000	Myotis_lucifugus
ENSACLG00000026325	cpsf6	61	54.404	ENSNGAG00000005031	Cpsf7	71	57.803	Nannospalax_galili
ENSACLG00000026325	cpsf6	100	93.345	ENSNBRG00000004089	cpsf6	100	93.345	Neolamprologus_brichardi
ENSACLG00000026325	cpsf6	77	85.328	ENSNLEG00000003798	CPSF6	91	84.942	Nomascus_leucogenys
ENSACLG00000026325	cpsf6	61	53.886	ENSNLEG00000002529	CPSF7	65	57.225	Nomascus_leucogenys
ENSACLG00000026325	cpsf6	61	54.404	ENSMEUG00000002261	CPSF7	71	57.803	Notamacropus_eugenii
ENSACLG00000026325	cpsf6	61	52.041	ENSODEG00000002610	CPSF7	71	57.386	Octodon_degus
ENSACLG00000026325	cpsf6	62	89.157	ENSODEG00000004418	-	78	90.361	Octodon_degus
ENSACLG00000026325	cpsf6	100	98.464	ENSONIG00000011702	cpsf6	100	98.464	Oreochromis_niloticus
ENSACLG00000026325	cpsf6	61	53.368	ENSOCUG00000024726	CPSF7	71	57.225	Oryctolagus_cuniculus
ENSACLG00000026325	cpsf6	61	35.776	ENSORLG00000006495	CPSF7	69	39.429	Oryzias_latipes
ENSACLG00000026325	cpsf6	61	35.776	ENSORLG00020012657	CPSF7	69	39.429	Oryzias_latipes_hni
ENSACLG00000026325	cpsf6	61	35.776	ENSORLG00015011091	CPSF7	68	39.766	Oryzias_latipes_hsok
ENSACLG00000026325	cpsf6	65	37.069	ENSOMEG00000000539	CPSF7	73	40.462	Oryzias_melastigma
ENSACLG00000026325	cpsf6	61	54.404	ENSOGAG00000027958	CPSF7	66	57.803	Otolemur_garnettii
ENSACLG00000026325	cpsf6	61	54.404	ENSOARG00000012937	CPSF7	64	57.225	Ovis_aries
ENSACLG00000026325	cpsf6	61	53.886	ENSPPAG00000028232	CPSF7	69	57.225	Pan_paniscus
ENSACLG00000026325	cpsf6	61	54.404	ENSPPRG00000008538	CPSF7	71	57.803	Panthera_pardus
ENSACLG00000026325	cpsf6	61	54.404	ENSPTIG00000021699	CPSF7	71	57.803	Panthera_tigris_altaica
ENSACLG00000026325	cpsf6	61	53.886	ENSPTRG00000003742	CPSF7	71	57.225	Pan_troglodytes
ENSACLG00000026325	cpsf6	77	83.846	ENSPTRG00000005205	CPSF6	91	84.231	Pan_troglodytes
ENSACLG00000026325	cpsf6	61	53.886	ENSPANG00000006037	CPSF7	67	57.225	Papio_anubis
ENSACLG00000026325	cpsf6	75	93.443	ENSPANG00000011641	CPSF6	91	84.231	Papio_anubis
ENSACLG00000026325	cpsf6	60	46.629	ENSPKIG00000018054	CPSF7	65	46.584	Paramormyrops_kingsleyae
ENSACLG00000026325	cpsf6	56	78.788	ENSPSIG00000016360	CPSF6	70	81.343	Pelodiscus_sinensis
ENSACLG00000026325	cpsf6	61	54.404	ENSPEMG00000012648	Cpsf7	73	57.803	Peromyscus_maniculatus_bairdii
ENSACLG00000026325	cpsf6	61	52.041	ENSPCIG00000002551	CPSF7	84	53.631	Phascolarctos_cinereus
ENSACLG00000026325	cpsf6	76	94.828	ENSPLAG00000005715	cpsf6	95	92.252	Poecilia_latipinna
ENSACLG00000026325	cpsf6	95	85.225	ENSPMEG00000001353	cpsf6	95	92.252	Poecilia_mexicana
ENSACLG00000026325	cpsf6	55	92.260	ENSPREG00000004417	cpsf6	95	92.252	Poecilia_reticulata
ENSACLG00000026325	cpsf6	61	53.886	ENSPPYG00000003188	CPSF7	71	57.225	Pongo_abelii
ENSACLG00000026325	cpsf6	76	84.170	ENSPCOG00000024384	CPSF6	91	84.231	Propithecus_coquereli
ENSACLG00000026325	cpsf6	61	54.404	ENSPCOG00000011976	CPSF7	71	57.803	Propithecus_coquereli
ENSACLG00000026325	cpsf6	61	54.404	ENSPVAG00000010675	CPSF7	71	57.803	Pteropus_vampyrus
ENSACLG00000026325	cpsf6	100	99.488	ENSPNYG00000020315	cpsf6	100	99.488	Pundamilia_nyererei
ENSACLG00000026325	cpsf6	61	53.886	ENSRBIG00000031429	CPSF7	77	64.122	Rhinopithecus_bieti
ENSACLG00000026325	cpsf6	77	83.846	ENSRBIG00000042827	CPSF6	91	84.231	Rhinopithecus_bieti
ENSACLG00000026325	cpsf6	77	85.328	ENSRROG00000042758	CPSF6	91	84.942	Rhinopithecus_roxellana
ENSACLG00000026325	cpsf6	61	53.886	ENSRROG00000045009	CPSF7	71	57.225	Rhinopithecus_roxellana
ENSACLG00000026325	cpsf6	74	83.846	ENSSBOG00000010652	CPSF6	90	84.231	Saimiri_boliviensis_boliviensis
ENSACLG00000026325	cpsf6	61	53.886	ENSSBOG00000018431	CPSF7	71	57.225	Saimiri_boliviensis_boliviensis
ENSACLG00000026325	cpsf6	59	54.404	ENSSHAG00000011964	CPSF7	68	57.803	Sarcophilus_harrisii
ENSACLG00000026325	cpsf6	58	43.094	ENSSFOG00015010288	cpsf7	73	41.954	Scleropages_formosus
ENSACLG00000026325	cpsf6	55	94.375	ENSSMAG00000000471	cpsf6	95	89.189	Scophthalmus_maximus
ENSACLG00000026325	cpsf6	100	96.758	ENSSDUG00000005024	cpsf6	100	96.758	Seriola_dumerili
ENSACLG00000026325	cpsf6	100	96.758	ENSSLDG00000009042	cpsf6	100	96.758	Seriola_lalandi_dorsalis
ENSACLG00000026325	cpsf6	80	87.402	ENSSARG00000006743	CPSF6	75	88.976	Sorex_araneus
ENSACLG00000026325	cpsf6	100	96.246	ENSSPAG00000013906	cpsf6	100	96.246	Stegastes_partitus
ENSACLG00000026325	cpsf6	61	54.404	ENSSSCG00000013083	CPSF7	75	64.885	Sus_scrofa
ENSACLG00000026325	cpsf6	59	50.000	ENSTGUG00000006513	CPSF7	71	52.907	Taeniopygia_guttata
ENSACLG00000026325	cpsf6	56	53.886	ENSTTRG00000011085	CPSF7	69	57.803	Tursiops_truncatus
ENSACLG00000026325	cpsf6	61	54.404	ENSUAMG00000017809	CPSF7	71	57.803	Ursus_americanus
ENSACLG00000026325	cpsf6	56	92.121	ENSUMAG00000020779	CPSF6	65	92.121	Ursus_maritimus
ENSACLG00000026325	cpsf6	63	54.404	ENSUMAG00000011825	CPSF7	73	57.803	Ursus_maritimus
ENSACLG00000026325	cpsf6	61	54.404	ENSVVUG00000004939	CPSF7	75	64.885	Vulpes_vulpes
ENSACLG00000026325	cpsf6	97	37.736	ENSXETG00000006715	cpsf7	65	52.353	Xenopus_tropicalis
ENSACLG00000026325	cpsf6	55	92.260	ENSXMAG00000003459	cpsf6	95	92.072	Xiphophorus_maculatus