EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000026356 (Gene tree)
Gene ID: 113010041
Gene Symbol: LARP4B
Alias: KIAA0217|LARP5
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 49558 bases
Position: chr18:4970310-5019867
Accession: 113010041
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000039156	La	PF05383.17	1.7e-13	1	1
ENSACLP00000039119	La	PF05383.17	1.9e-13	1	1
ENSACLP00000039088	La	PF05383.17	2.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000040085	LARP4B-203	2049	-	ENSACLP00000039156	682 (aa)	-	-
ENSACLT00000040048	LARP4B-202	3012	-	ENSACLP00000039119	715 (aa)	XP_026004610	UPI0003297337
ENSACLT00000040016	LARP4B-201	3177	-	ENSACLP00000039088	770 (aa)	XP_026004608	UPI0003299D92

Gene Model

Click here to download ENSACLG00000026356's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000026356's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000026356	LARP4B	100	57.606	ENSG00000107929	LARP4B	100	56.538	Homo_sapiens
ENSACLG00000026356	LARP4B	100	80.851	ENSAPOG00000020531	LARP4B	95	89.455	Acanthochromis_polyacanthus
ENSACLG00000026356	LARP4B	100	55.709	ENSAMEG00000001810	LARP4B	100	55.960	Ailuropoda_melanoleuca
ENSACLG00000026356	LARP4B	98	74.661	ENSAOCG00000007887	-	100	89.631	Amphiprion_ocellaris
ENSACLG00000026356	LARP4B	92	88.128	ENSAPEG00000002512	LARP4B	96	85.447	Amphiprion_percula
ENSACLG00000026356	LARP4B	100	88.303	ENSATEG00000012614	LARP4B	100	88.303	Anabas_testudineus
ENSACLG00000026356	LARP4B	100	60.075	ENSAPLG00000003813	LARP4B	98	59.715	Anas_platyrhynchos
ENSACLG00000026356	LARP4B	100	60.360	ENSACAG00000002858	LARP4B	100	60.154	Anolis_carolinensis
ENSACLG00000026356	LARP4B	100	57.179	ENSANAG00000007531	-	100	56.429	Aotus_nancymaae
ENSACLG00000026356	LARP4B	94	54.839	ENSAMXG00000003335	larp4b	97	53.706	Astyanax_mexicanus
ENSACLG00000026356	LARP4B	100	58.243	ENSBTAG00000013899	LARP4B	100	57.973	Bos_taurus
ENSACLG00000026356	LARP4B	100	57.179	ENSCJAG00000018434	LARP4B	100	56.250	Callithrix_jacchus
ENSACLG00000026356	LARP4B	100	56.462	ENSCAFG00020004209	LARP4B	100	56.713	Canis_lupus_dingo
ENSACLG00000026356	LARP4B	99	55.921	ENSCHIG00000013543	LARP4B	99	55.658	Capra_hircus
ENSACLG00000026356	LARP4B	89	62.326	ENSTSYG00000002568	LARP4B	100	62.058	Carlito_syrichta
ENSACLG00000026356	LARP4B	87	58.167	ENSCAPG00000009725	LARP4B	85	55.136	Cavia_aperea
ENSACLG00000026356	LARP4B	100	56.320	ENSCPOG00000009375	LARP4B	100	56.226	Cavia_porcellus
ENSACLG00000026356	LARP4B	100	57.054	ENSCCAG00000024869	LARP4B	100	56.305	Cebus_capucinus
ENSACLG00000026356	LARP4B	100	57.731	ENSCATG00000019750	LARP4B	100	56.663	Cercocebus_atys
ENSACLG00000026356	LARP4B	100	58.003	ENSCLAG00000011570	LARP4B	100	57.618	Chinchilla_lanigera
ENSACLG00000026356	LARP4B	63	78.788	ENSCHOG00000007831	-	59	78.788	Choloepus_hoffmanni
ENSACLG00000026356	LARP4B	100	60.875	ENSCPBG00000017063	LARP4B	100	60.425	Chrysemys_picta_bellii
ENSACLG00000026356	LARP4B	100	55.860	ENSCANG00000038021	LARP4B	100	54.738	Colobus_angolensis_palliatus
ENSACLG00000026356	LARP4B	100	56.679	ENSCGRG00001022930	Larp4b	100	62.139	Cricetulus_griseus_chok1gshd
ENSACLG00000026356	LARP4B	100	56.679	ENSCGRG00000006022	Larp4b	100	62.139	Cricetulus_griseus_crigri
ENSACLG00000026356	LARP4B	100	78.020	ENSCSEG00000007342	LARP4B	100	78.020	Cynoglossus_semilaevis
ENSACLG00000026356	LARP4B	97	88.077	ENSCVAG00000008910	LARP4B	100	84.123	Cyprinodon_variegatus
ENSACLG00000026356	LARP4B	95	54.072	ENSDARG00000062146	larp4b	96	53.557	Danio_rerio
ENSACLG00000026356	LARP4B	96	57.219	ENSDNOG00000045543	-	100	63.022	Dasypus_novemcinctus
ENSACLG00000026356	LARP4B	100	55.056	ENSDORG00000009328	Larp4b	100	54.688	Dipodomys_ordii
ENSACLG00000026356	LARP4B	88	58.571	ENSETEG00000011249	LARP4B	90	58.357	Echinops_telfairi
ENSACLG00000026356	LARP4B	100	55.905	ENSEASG00005019068	-	100	56.021	Equus_asinus_asinus
ENSACLG00000026356	LARP4B	100	56.156	ENSECAG00000024040	LARP4B	100	56.533	Equus_caballus
ENSACLG00000026356	LARP4B	91	57.337	ENSEEUG00000008391	LARP4B	98	55.280	Erinaceus_europaeus
ENSACLG00000026356	LARP4B	86	44.141	ENSELUG00000001417	-	94	44.141	Esox_lucius
ENSACLG00000026356	LARP4B	100	71.820	ENSELUG00000008626	LARP4B	100	71.357	Esox_lucius
ENSACLG00000026356	LARP4B	100	56.462	ENSFCAG00000000721	-	100	56.454	Felis_catus
ENSACLG00000026356	LARP4B	100	61.568	ENSFALG00000006961	LARP4B	100	61.067	Ficedula_albicollis
ENSACLG00000026356	LARP4B	100	56.929	ENSFDAG00000006158	LARP4B	97	56.320	Fukomys_damarensis
ENSACLG00000026356	LARP4B	100	71.781	ENSFHEG00000013037	LARP4B	100	72.352	Fundulus_heteroclitus
ENSACLG00000026356	LARP4B	84	63.974	ENSGMOG00000010818	-	100	64.620	Gadus_morhua
ENSACLG00000026356	LARP4B	100	60.563	ENSGALG00000006672	LARP4B	100	60.132	Gallus_gallus
ENSACLG00000026356	LARP4B	100	76.456	ENSGACG00000017535	LARP4B	98	76.208	Gasterosteus_aculeatus
ENSACLG00000026356	LARP4B	96	59.433	ENSGAGG00000008598	LARP4B	100	58.887	Gopherus_agassizii
ENSACLG00000026356	LARP4B	100	57.606	ENSGGOG00000003572	LARP4B	100	56.538	Gorilla_gorilla
ENSACLG00000026356	LARP4B	100	98.741	ENSHBUG00000007535	LARP4B	100	98.741	Haplochromis_burtoni
ENSACLG00000026356	LARP4B	100	57.285	ENSHGLG00000012936	LARP4B	100	64.346	Heterocephalus_glaber_female
ENSACLG00000026356	LARP4B	100	57.303	ENSHGLG00100016220	-	100	56.929	Heterocephalus_glaber_male
ENSACLG00000026356	LARP4B	85	54.295	ENSHGLG00100017261	-	100	53.971	Heterocephalus_glaber_male
ENSACLG00000026356	LARP4B	99	75.723	ENSHCOG00000011581	LARP4B	89	75.723	Hippocampus_comes
ENSACLG00000026356	LARP4B	94	53.378	ENSIPUG00000009705	larp4b	97	53.587	Ictalurus_punctatus
ENSACLG00000026356	LARP4B	100	59.467	ENSSTOG00000000587	LARP4B	100	59.200	Ictidomys_tridecemlineatus
ENSACLG00000026356	LARP4B	100	56.771	ENSJJAG00000020847	Larp4b	100	56.510	Jaculus_jaculus
ENSACLG00000026356	LARP4B	100	88.966	ENSKMAG00000021674	LARP4B	100	88.966	Kryptolebias_marmoratus
ENSACLG00000026356	LARP4B	80	88.960	ENSLBEG00000025293	-	82	92.269	Labrus_bergylta
ENSACLG00000026356	LARP4B	94	58.174	ENSLACG00000009492	LARP4B	100	58.992	Latimeria_chalumnae
ENSACLG00000026356	LARP4B	100	65.685	ENSLOCG00000012290	larp4b	100	65.944	Lepisosteus_oculatus
ENSACLG00000026356	LARP4B	100	56.420	ENSLAFG00000015334	LARP4B	100	56.347	Loxodonta_africana
ENSACLG00000026356	LARP4B	100	57.731	ENSMFAG00000001766	LARP4B	100	54.795	Macaca_fascicularis
ENSACLG00000026356	LARP4B	100	57.731	ENSMMUG00000005279	LARP4B	100	56.663	Macaca_mulatta
ENSACLG00000026356	LARP4B	100	57.606	ENSMNEG00000014019	LARP4B	100	54.613	Macaca_nemestrina
ENSACLG00000026356	LARP4B	100	57.731	ENSMLEG00000035198	LARP4B	100	56.663	Mandrillus_leucophaeus
ENSACLG00000026356	LARP4B	100	88.062	ENSMAMG00000013742	LARP4B	100	87.420	Mastacembelus_armatus
ENSACLG00000026356	LARP4B	94	99.034	ENSMZEG00005014594	-	100	99.034	Maylandia_zebra
ENSACLG00000026356	LARP4B	100	93.421	ENSMZEG00005006498	-	98	98.847	Maylandia_zebra
ENSACLG00000026356	LARP4B	100	58.679	ENSMGAG00000005472	LARP4B	100	58.420	Meleagris_gallopavo
ENSACLG00000026356	LARP4B	100	56.500	ENSMAUG00000021657	Larp4b	100	63.158	Mesocricetus_auratus
ENSACLG00000026356	LARP4B	100	58.299	ENSMICG00000001301	LARP4B	100	58.082	Microcebus_murinus
ENSACLG00000026356	LARP4B	100	54.178	ENSMOCG00000021452	Larp4b	100	62.139	Microtus_ochrogaster
ENSACLG00000026356	LARP4B	100	78.336	ENSMMOG00000011253	-	100	78.902	Mola_mola
ENSACLG00000026356	LARP4B	100	58.543	ENSMODG00000005957	LARP4B	100	58.675	Monodelphis_domestica
ENSACLG00000026356	LARP4B	100	72.385	ENSMALG00000012432	LARP4B	100	73.806	Monopterus_albus
ENSACLG00000026356	LARP4B	100	56.845	MGP_CAROLIEiJ_G0018216	Larp4b	100	62.969	Mus_caroli
ENSACLG00000026356	LARP4B	100	57.054	ENSMUSG00000033499	Larp4b	100	62.586	Mus_musculus
ENSACLG00000026356	LARP4B	100	57.071	MGP_PahariEiJ_G0019266	Larp4b	100	62.735	Mus_pahari
ENSACLG00000026356	LARP4B	100	57.054	MGP_SPRETEiJ_G0019074	Larp4b	100	62.759	Mus_spretus
ENSACLG00000026356	LARP4B	100	55.709	ENSMPUG00000016220	LARP4B	97	56.545	Mustela_putorius_furo
ENSACLG00000026356	LARP4B	88	58.601	ENSMLUG00000005880	LARP4B	99	56.170	Myotis_lucifugus
ENSACLG00000026356	LARP4B	100	57.386	ENSNGAG00000001750	Larp4b	100	57.124	Nannospalax_galili
ENSACLG00000026356	LARP4B	100	83.644	ENSNBRG00000020018	LARP4B	100	83.644	Neolamprologus_brichardi
ENSACLG00000026356	LARP4B	100	57.428	ENSNLEG00000013442	LARP4B	100	56.359	Nomascus_leucogenys
ENSACLG00000026356	LARP4B	84	47.510	ENSMEUG00000013114	-	83	47.826	Notamacropus_eugenii
ENSACLG00000026356	LARP4B	100	54.332	ENSOPRG00000003300	LARP4B	100	54.204	Ochotona_princeps
ENSACLG00000026356	LARP4B	100	53.433	ENSODEG00000001109	LARP4B	100	59.316	Octodon_degus
ENSACLG00000026356	LARP4B	100	98.312	ENSONIG00000017705	LARP4B	100	98.312	Oreochromis_niloticus
ENSACLG00000026356	LARP4B	100	57.235	ENSOANG00000006100	LARP4B	100	57.180	Ornithorhynchus_anatinus
ENSACLG00000026356	LARP4B	100	54.756	ENSOCUG00000004950	LARP4B	97	54.384	Oryctolagus_cuniculus
ENSACLG00000026356	LARP4B	100	83.613	ENSORLG00000006080	LARP4B	100	83.484	Oryzias_latipes
ENSACLG00000026356	LARP4B	100	83.705	ENSORLG00020020940	LARP4B	100	83.565	Oryzias_latipes_hni
ENSACLG00000026356	LARP4B	100	83.799	ENSORLG00015020608	LARP4B	100	83.520	Oryzias_latipes_hsok
ENSACLG00000026356	LARP4B	100	83.380	ENSOMEG00000019619	LARP4B	100	83.380	Oryzias_melastigma
ENSACLG00000026356	LARP4B	96	56.259	ENSOGAG00000011540	LARP4B	99	55.977	Otolemur_garnettii
ENSACLG00000026356	LARP4B	100	55.487	ENSOARG00000015320	LARP4B	98	55.469	Ovis_aries
ENSACLG00000026356	LARP4B	100	57.731	ENSPPAG00000039232	LARP4B	100	56.663	Pan_paniscus
ENSACLG00000026356	LARP4B	100	56.587	ENSPPRG00000009489	LARP4B	100	56.283	Panthera_pardus
ENSACLG00000026356	LARP4B	100	56.587	ENSPTIG00000008543	LARP4B	100	56.283	Panthera_tigris_altaica
ENSACLG00000026356	LARP4B	100	57.731	ENSPTRG00000002235	LARP4B	100	56.663	Pan_troglodytes
ENSACLG00000026356	LARP4B	100	57.731	ENSPANG00000023546	LARP4B	100	54.795	Papio_anubis
ENSACLG00000026356	LARP4B	98	61.046	ENSPKIG00000012368	LARP4B	97	60.654	Paramormyrops_kingsleyae
ENSACLG00000026356	LARP4B	75	71.562	ENSPSIG00000005600	LARP4B	99	70.938	Pelodiscus_sinensis
ENSACLG00000026356	LARP4B	98	65.665	ENSPMGG00000008261	LARP4B	87	76.095	Periophthalmus_magnuspinnatus
ENSACLG00000026356	LARP4B	100	56.462	ENSPEMG00000014052	Larp4b	100	56.085	Peromyscus_maniculatus_bairdii
ENSACLG00000026356	LARP4B	100	83.397	ENSPFOG00000000029	LARP4B	100	82.353	Poecilia_formosa
ENSACLG00000026356	LARP4B	100	83.780	ENSPLAG00000002871	LARP4B	100	82.864	Poecilia_latipinna
ENSACLG00000026356	LARP4B	96	87.595	ENSPMEG00000016361	LARP4B	100	82.483	Poecilia_mexicana
ENSACLG00000026356	LARP4B	100	56.787	ENSPPYG00000002035	LARP4B	97	56.095	Pongo_abelii
ENSACLG00000026356	LARP4B	100	56.675	ENSPCOG00000014688	LARP4B	100	56.297	Propithecus_coquereli
ENSACLG00000026356	LARP4B	89	56.988	ENSPVAG00000009784	LARP4B	83	57.512	Pteropus_vampyrus
ENSACLG00000026356	LARP4B	100	99.481	ENSPNYG00000024252	LARP4B	100	99.481	Pundamilia_nyererei
ENSACLG00000026356	LARP4B	94	54.021	ENSPNAG00000028956	larp4b	96	54.108	Pygocentrus_nattereri
ENSACLG00000026356	LARP4B	99	56.750	ENSRNOG00000015888	Larp4b	100	56.488	Rattus_norvegicus
ENSACLG00000026356	LARP4B	100	57.731	ENSRBIG00000033294	LARP4B	100	56.663	Rhinopithecus_bieti
ENSACLG00000026356	LARP4B	100	57.855	ENSRROG00000033879	LARP4B	100	56.787	Rhinopithecus_roxellana
ENSACLG00000026356	LARP4B	100	51.806	ENSSBOG00000021109	LARP4B	100	51.108	Saimiri_boliviensis_boliviensis
ENSACLG00000026356	LARP4B	100	59.893	ENSSHAG00000013392	LARP4B	100	59.839	Sarcophilus_harrisii
ENSACLG00000026356	LARP4B	92	63.624	ENSSFOG00015003256	LARP4B	93	60.606	Scleropages_formosus
ENSACLG00000026356	LARP4B	86	100.000	ENSSMAG00000005982	-	99	100.000	Scophthalmus_maximus
ENSACLG00000026356	LARP4B	100	91.911	ENSSDUG00000006704	LARP4B	100	91.911	Seriola_dumerili
ENSACLG00000026356	LARP4B	100	83.718	ENSSLDG00000020660	LARP4B	100	83.718	Seriola_lalandi_dorsalis
ENSACLG00000026356	LARP4B	72	85.047	ENSSARG00000001243	-	79	85.047	Sorex_araneus
ENSACLG00000026356	LARP4B	100	59.917	ENSSPUG00000013734	-	100	62.599	Sphenodon_punctatus
ENSACLG00000026356	LARP4B	100	63.384	ENSSPUG00000002102	-	100	63.107	Sphenodon_punctatus
ENSACLG00000026356	LARP4B	100	83.090	ENSSPAG00000014628	LARP4B	92	94.432	Stegastes_partitus
ENSACLG00000026356	LARP4B	100	56.946	ENSSSCG00000011162	LARP4B	97	62.376	Sus_scrofa
ENSACLG00000026356	LARP4B	100	60.610	ENSTGUG00000000811	-	100	60.203	Taeniopygia_guttata
ENSACLG00000026356	LARP4B	99	68.970	ENSTNIG00000007991	LARP4B	100	74.409	Tetraodon_nigroviridis
ENSACLG00000026356	LARP4B	100	71.073	ENSTNIG00000004571	-	98	71.073	Tetraodon_nigroviridis
ENSACLG00000026356	LARP4B	77	60.886	ENSTTRG00000011151	LARP4B	86	61.078	Tursiops_truncatus
ENSACLG00000026356	LARP4B	86	59.534	ENSUAMG00000016461	LARP4B	95	59.098	Ursus_americanus
ENSACLG00000026356	LARP4B	100	56.336	ENSUMAG00000016127	LARP4B	100	56.587	Ursus_maritimus
ENSACLG00000026356	LARP4B	50	86.034	ENSVPAG00000000128	-	64	86.034	Vicugna_pacos
ENSACLG00000026356	LARP4B	100	56.211	ENSVVUG00000008641	LARP4B	100	56.462	Vulpes_vulpes
ENSACLG00000026356	LARP4B	99	60.283	ENSXETG00000016882	larp4b	100	60.462	Xenopus_tropicalis
ENSACLG00000026356	LARP4B	100	70.850	ENSXCOG00000019952	LARP4B	100	70.683	Xiphophorus_couchianus
ENSACLG00000026356	LARP4B	100	83.978	ENSXMAG00000021533	LARP4B	100	82.573	Xiphophorus_maculatus