EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000026521 (Gene tree)
Gene ID: 113010504
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 316-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 8668 bases
Position: chr18:18688143-18696810
Accession: 113010504
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000039305	zf-C2H2	PF00096.26	7.9e-15	1	2
ENSACLP00000039305	zf-C2H2	PF00096.26	7.9e-15	2	2
ENSACLP00000039305	zf-met	PF12874.7	2.5e-06	1	2
ENSACLP00000039305	zf-met	PF12874.7	2.5e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000040236	-	6479	-	ENSACLP00000039305	646 (aa)	XP_026005375	UPI000E40923B

Gene Model

Click here to download ENSACLG00000026521's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000026521's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000026521	-	51	34.896	ENSACLG00000019318	-	98	46.970

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000026521	-	95	48.532	ENSAPOG00000014259	-	88	51.384	Acanthochromis_polyacanthus
ENSACLG00000026521	-	100	96.241	ENSHBUG00000003157	-	100	96.241	Haplochromis_burtoni
ENSACLG00000026521	-	98	45.852	ENSMAMG00000012196	-	97	45.906	Mastacembelus_armatus
ENSACLG00000026521	-	72	45.059	ENSMAMG00000012191	-	83	46.105	Mastacembelus_armatus
ENSACLG00000026521	-	76	56.167	ENSMAMG00000012185	-	95	56.203	Mastacembelus_armatus
ENSACLG00000026521	-	100	99.690	ENSMZEG00005025468	-	100	99.690	Maylandia_zebra
ENSACLG00000026521	-	94	59.938	ENSMALG00000017313	-	90	60.447	Monopterus_albus
ENSACLG00000026521	-	100	60.826	ENSSDUG00000009330	-	100	61.111	Seriola_dumerili