EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000026538 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 11077 bases
Position: chrLS419928.1:5389-16465
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000039332	zf-C2H2	PF00096.26	9.3e-56	1	10
ENSACLP00000039332	zf-C2H2	PF00096.26	9.3e-56	2	10
ENSACLP00000039332	zf-C2H2	PF00096.26	9.3e-56	3	10
ENSACLP00000039332	zf-C2H2	PF00096.26	9.3e-56	4	10
ENSACLP00000039332	zf-C2H2	PF00096.26	9.3e-56	5	10
ENSACLP00000039332	zf-C2H2	PF00096.26	9.3e-56	6	10
ENSACLP00000039332	zf-C2H2	PF00096.26	9.3e-56	7	10
ENSACLP00000039332	zf-C2H2	PF00096.26	9.3e-56	8	10
ENSACLP00000039332	zf-C2H2	PF00096.26	9.3e-56	9	10
ENSACLP00000039332	zf-C2H2	PF00096.26	9.3e-56	10	10
ENSACLP00000039332	zf-met	PF12874.7	1.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000040262	-	1293	-	ENSACLP00000039332	430 (aa)	-	-

Gene Model

Click here to download ENSACLG00000026538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000026538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000026538	-	83	40.656	ENSACLG00000000102	-	54	40.391
ENSACLG00000026538	-	99	48.498	ENSACLG00000021184	-	73	48.498
ENSACLG00000026538	-	83	40.588	ENSACLG00000019499	-	91	39.943
ENSACLG00000026538	-	87	44.720	ENSACLG00000005708	-	82	44.720
ENSACLG00000026538	-	85	42.462	ENSACLG00000028002	-	94	42.462
ENSACLG00000026538	-	83	42.969	ENSACLG00000001045	-	97	42.566
ENSACLG00000026538	-	94	51.955	ENSACLG00000023305	-	98	51.955
ENSACLG00000026538	-	83	36.585	ENSACLG00000005594	ZNF319	95	36.585
ENSACLG00000026538	-	99	50.000	ENSACLG00000017801	-	76	50.000
ENSACLG00000026538	-	83	42.169	ENSACLG00000022383	-	98	40.755
ENSACLG00000026538	-	85	40.860	ENSACLG00000020268	-	84	40.860
ENSACLG00000026538	-	83	46.970	ENSACLG00000020260	-	100	46.970
ENSACLG00000026538	-	83	42.661	ENSACLG00000014336	-	93	42.661
ENSACLG00000026538	-	83	40.127	ENSACLG00000001368	-	96	40.127
ENSACLG00000026538	-	83	40.777	ENSACLG00000019674	-	88	42.512
ENSACLG00000026538	-	99	46.053	ENSACLG00000006870	-	85	45.575
ENSACLG00000026538	-	90	39.429	ENSACLG00000019094	-	97	39.429
ENSACLG00000026538	-	99	55.556	ENSACLG00000024670	-	94	55.556
ENSACLG00000026538	-	80	34.956	ENSACLG00000022191	znf407	66	34.956
ENSACLG00000026538	-	83	41.716	ENSACLG00000017336	-	93	41.716
ENSACLG00000026538	-	82	35.922	ENSACLG00000017996	prdm5	84	35.922
ENSACLG00000026538	-	99	53.066	ENSACLG00000025163	-	98	53.066
ENSACLG00000026538	-	83	41.200	ENSACLG00000017925	-	65	41.200
ENSACLG00000026538	-	99	42.593	ENSACLG00000016405	zbtb17	56	40.884
ENSACLG00000026538	-	83	40.260	ENSACLG00000008606	-	89	40.260
ENSACLG00000026538	-	99	48.899	ENSACLG00000018746	-	94	46.977
ENSACLG00000026538	-	83	41.667	ENSACLG00000022475	-	93	38.839
ENSACLG00000026538	-	83	40.803	ENSACLG00000003546	-	58	40.803
ENSACLG00000026538	-	80	38.889	ENSACLG00000004663	-	74	41.429
ENSACLG00000026538	-	83	42.901	ENSACLG00000006528	-	96	42.901
ENSACLG00000026538	-	83	41.667	ENSACLG00000017329	-	84	41.667
ENSACLG00000026538	-	95	46.416	ENSACLG00000017576	-	97	47.785
ENSACLG00000026538	-	99	48.954	ENSACLG00000020474	-	97	48.954
ENSACLG00000026538	-	99	50.588	ENSACLG00000017321	-	89	48.879
ENSACLG00000026538	-	97	46.061	ENSACLG00000005795	-	89	46.061
ENSACLG00000026538	-	99	59.794	ENSACLG00000025196	-	95	59.794
ENSACLG00000026538	-	83	42.328	ENSACLG00000019482	-	74	42.328
ENSACLG00000026538	-	83	46.218	ENSACLG00000019167	-	89	38.483
ENSACLG00000026538	-	99	46.746	ENSACLG00000008374	-	77	46.746
ENSACLG00000026538	-	83	43.023	ENSACLG00000013454	-	65	43.023
ENSACLG00000026538	-	91	45.420	ENSACLG00000023963	-	99	45.420
ENSACLG00000026538	-	92	51.049	ENSACLG00000023979	-	98	54.839
ENSACLG00000026538	-	83	41.964	ENSACLG00000007888	-	76	41.964
ENSACLG00000026538	-	99	53.782	ENSACLG00000019318	-	99	53.782
ENSACLG00000026538	-	83	42.540	ENSACLG00000003332	-	98	42.540
ENSACLG00000026538	-	83	41.765	ENSACLG00000001018	-	88	41.765
ENSACLG00000026538	-	82	39.560	ENSACLG00000022305	-	90	39.560
ENSACLG00000026538	-	93	56.349	ENSACLG00000025251	-	97	56.268
ENSACLG00000026538	-	89	59.487	ENSACLG00000024294	-	90	59.487
ENSACLG00000026538	-	99	53.191	ENSACLG00000026703	-	85	52.979
ENSACLG00000026538	-	83	39.007	ENSACLG00000015816	-	93	38.710
ENSACLG00000026538	-	98	49.645	ENSACLG00000020975	-	99	49.645
ENSACLG00000026538	-	89	35.032	ENSACLG00000012712	znf646	93	35.032
ENSACLG00000026538	-	89	40.708	ENSACLG00000001003	-	89	40.708
ENSACLG00000026538	-	83	47.706	ENSACLG00000008821	-	93	47.706
ENSACLG00000026538	-	83	43.548	ENSACLG00000003229	-	93	43.548
ENSACLG00000026538	-	83	43.260	ENSACLG00000000537	-	98	41.049
ENSACLG00000026538	-	80	47.917	ENSACLG00000021022	-	70	47.917
ENSACLG00000026538	-	98	55.310	ENSACLG00000024308	-	99	55.660
ENSACLG00000026538	-	87	35.821	ENSACLG00000018551	snai2	72	34.756
ENSACLG00000026538	-	83	44.595	ENSACLG00000015462	-	61	44.482
ENSACLG00000026538	-	99	43.478	ENSACLG00000027053	gfi1b	52	43.478
ENSACLG00000026538	-	83	44.444	ENSACLG00000006697	-	76	44.444
ENSACLG00000026538	-	80	43.515	ENSACLG00000011239	-	72	43.515
ENSACLG00000026538	-	99	54.524	ENSACLG00000011237	-	100	51.829
ENSACLG00000026538	-	83	43.103	ENSACLG00000000411	-	90	43.103
ENSACLG00000026538	-	81	41.279	ENSACLG00000000521	-	93	42.056
ENSACLG00000026538	-	88	40.237	ENSACLG00000002844	-	84	40.237
ENSACLG00000026538	-	84	37.363	ENSACLG00000006702	-	86	37.363
ENSACLG00000026538	-	80	40.952	ENSACLG00000014167	-	60	40.952
ENSACLG00000026538	-	84	40.816	ENSACLG00000022482	-	80	40.816
ENSACLG00000026538	-	80	44.030	ENSACLG00000008624	-	77	42.775
ENSACLG00000026538	-	100	49.306	ENSACLG00000006718	-	89	49.306
ENSACLG00000026538	-	81	37.879	ENSACLG00000012046	-	53	37.879
ENSACLG00000026538	-	99	57.310	ENSACLG00000024459	-	90	57.310
ENSACLG00000026538	-	86	41.600	ENSACLG00000017941	-	61	42.560
ENSACLG00000026538	-	97	41.176	ENSACLG00000005694	-	66	41.176
ENSACLG00000026538	-	83	49.787	ENSACLG00000020339	-	80	39.946
ENSACLG00000026538	-	100	49.306	ENSACLG00000020333	-	89	49.306
ENSACLG00000026538	-	87	41.096	ENSACLG00000014176	-	83	43.049
ENSACLG00000026538	-	87	46.919	ENSACLG00000017487	-	77	46.919
ENSACLG00000026538	-	90	56.250	ENSACLG00000013935	-	83	55.833
ENSACLG00000026538	-	91	35.125	ENSACLG00000022287	-	69	35.125
ENSACLG00000026538	-	83	39.860	ENSACLG00000022499	-	84	39.860
ENSACLG00000026538	-	83	39.943	ENSACLG00000022497	-	93	39.943
ENSACLG00000026538	-	96	56.287	ENSACLG00000024647	-	96	56.287
ENSACLG00000026538	-	83	39.943	ENSACLG00000007749	-	77	39.943
ENSACLG00000026538	-	90	44.770	ENSACLG00000019270	-	80	44.770
ENSACLG00000026538	-	99	52.632	ENSACLG00000023513	-	96	52.632
ENSACLG00000026538	-	80	53.933	ENSACLG00000017849	-	67	53.933
ENSACLG00000026538	-	99	53.571	ENSACLG00000017939	-	99	48.673
ENSACLG00000026538	-	83	44.611	ENSACLG00000000487	-	89	44.611
ENSACLG00000026538	-	95	46.417	ENSACLG00000020393	-	90	46.307
ENSACLG00000026538	-	93	54.422	ENSACLG00000005617	-	64	54.422
ENSACLG00000026538	-	80	43.902	ENSACLG00000020231	-	93	46.053
ENSACLG00000026538	-	96	40.526	ENSACLG00000017449	-	57	40.526
ENSACLG00000026538	-	83	42.661	ENSACLG00000022439	-	78	42.661
ENSACLG00000026538	-	99	51.744	ENSACLG00000024491	-	94	51.744
ENSACLG00000026538	-	99	50.000	ENSACLG00000021056	-	70	38.579
ENSACLG00000026538	-	97	47.535	ENSACLG00000022505	-	96	46.341
ENSACLG00000026538	-	85	44.828	ENSACLG00000026103	znf526	65	32.456
ENSACLG00000026538	-	85	38.158	ENSACLG00000019291	-	89	38.158
ENSACLG00000026538	-	91	57.447	ENSACLG00000011710	-	99	57.447
ENSACLG00000026538	-	83	42.268	ENSACLG00000001507	-	77	42.268
ENSACLG00000026538	-	99	37.849	ENSACLG00000027424	-	91	37.849
ENSACLG00000026538	-	83	43.191	ENSACLG00000015843	-	99	41.525
ENSACLG00000026538	-	80	48.246	ENSACLG00000014365	-	90	40.336
ENSACLG00000026538	-	83	41.981	ENSACLG00000021846	-	86	41.981
ENSACLG00000026538	-	83	35.625	ENSACLG00000020579	znf319b	95	35.625
ENSACLG00000026538	-	82	43.902	ENSACLG00000015989	-	87	43.902
ENSACLG00000026538	-	93	41.026	ENSACLG00000022302	-	98	41.026
ENSACLG00000026538	-	83	48.148	ENSACLG00000018700	-	98	48.148
ENSACLG00000026538	-	83	41.994	ENSACLG00000018701	-	84	41.593
ENSACLG00000026538	-	83	58.696	ENSACLG00000018707	-	96	58.696
ENSACLG00000026538	-	99	52.000	ENSACLG00000021343	-	94	50.000
ENSACLG00000026538	-	99	52.830	ENSACLG00000024957	-	98	52.830
ENSACLG00000026538	-	92	44.444	ENSACLG00000021045	-	93	44.444
ENSACLG00000026538	-	83	41.993	ENSACLG00000000473	-	85	41.003
ENSACLG00000026538	-	83	31.383	ENSACLG00000026541	PRDM15	50	31.383
ENSACLG00000026538	-	79	51.852	ENSACLG00000019424	-	96	42.598
ENSACLG00000026538	-	99	37.528	ENSACLG00000020615	-	98	37.528
ENSACLG00000026538	-	83	41.667	ENSACLG00000014600	-	91	41.667
ENSACLG00000026538	-	80	35.714	ENSACLG00000016648	-	65	35.714
ENSACLG00000026538	-	83	38.767	ENSACLG00000003679	-	80	38.767
ENSACLG00000026538	-	94	51.838	ENSACLG00000011642	-	97	48.936
ENSACLG00000026538	-	99	53.074	ENSACLG00000005615	-	76	53.074
ENSACLG00000026538	-	93	48.182	ENSACLG00000012251	-	59	48.182
ENSACLG00000026538	-	83	43.609	ENSACLG00000018716	-	91	43.609
ENSACLG00000026538	-	99	45.185	ENSACLG00000010811	-	74	45.185
ENSACLG00000026538	-	91	37.143	ENSACLG00000017621	-	74	37.143
ENSACLG00000026538	-	83	44.444	ENSACLG00000001258	-	87	44.444
ENSACLG00000026538	-	80	44.079	ENSACLG00000013033	-	82	44.079
ENSACLG00000026538	-	83	39.806	ENSACLG00000019349	-	71	39.806
ENSACLG00000026538	-	83	49.580	ENSACLG00000011658	-	79	49.580
ENSACLG00000026538	-	83	41.457	ENSACLG00000023941	-	89	41.457
ENSACLG00000026538	-	85	44.724	ENSACLG00000027692	-	69	44.724
ENSACLG00000026538	-	98	44.167	ENSACLG00000016841	-	73	44.167
ENSACLG00000026538	-	83	40.991	ENSACLG00000022360	-	97	40.991
ENSACLG00000026538	-	91	47.089	ENSACLG00000020610	-	72	47.089
ENSACLG00000026538	-	83	40.461	ENSACLG00000017411	-	87	40.461
ENSACLG00000026538	-	88	37.037	ENSACLG00000007162	scrt1b	68	37.037
ENSACLG00000026538	-	78	43.697	ENSACLG00000026187	-	68	39.855

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000026538	-	83	50.699	ENSAOCG00000022276	-	97	50.699	Amphiprion_ocellaris
ENSACLG00000026538	-	83	51.770	ENSGAGG00000005805	-	83	51.770	Gopherus_agassizii
ENSACLG00000026538	-	85	45.230	ENSGAGG00000020168	-	77	45.230	Gopherus_agassizii
ENSACLG00000026538	-	83	48.168	ENSKMAG00000002448	-	79	48.168	Kryptolebias_marmoratus
ENSACLG00000026538	-	83	42.936	ENSMODG00000024585	-	76	44.910	Monodelphis_domestica
ENSACLG00000026538	-	83	47.024	ENSPCIG00000019488	-	80	47.024	Phascolarctos_cinereus
ENSACLG00000026538	-	83	33.564	ENSPFOG00000008519	-	99	32.824	Poecilia_formosa
ENSACLG00000026538	-	90	86.447	ENSPNYG00000018360	-	92	86.447	Pundamilia_nyererei
ENSACLG00000026538	-	99	47.157	ENSSLDG00000018598	-	98	47.110	Seriola_lalandi_dorsalis
ENSACLG00000026538	-	83	51.049	ENSXMAG00000022591	-	80	54.118	Xiphophorus_maculatus