EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000026754 (Gene tree)
Gene ID: -
Gene Symbol: srek1
Alias: zgc:100974
Full Name: splicing regulatory glutamine/lysine-rich protein 1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 9158 bases
Position: chr7:13615373-13624530
Accession: ZDB-GENE-040801-132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000039687	RRM_1	PF00076.22	5e-22	1	2
ENSACLP00000039687	RRM_1	PF00076.22	5e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000040628	-	879	-	ENSACLP00000039687	292 (aa)	-	-

Gene Model

Click here to download ENSACLG00000026754's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000026754's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000026754	srek1	94	81.495	ENSG00000153914	SREK1	90	83.333	Homo_sapiens
ENSACLG00000026754	srek1	94	44.727	ENSG00000116754	SRSF11	70	68.889	Homo_sapiens
ENSACLG00000026754	srek1	67	88.265	ENSAPOG00000023618	srek1	50	88.265	Acanthochromis_polyacanthus
ENSACLG00000026754	srek1	94	81.495	ENSAMEG00000011327	SREK1	53	60.932	Ailuropoda_melanoleuca
ENSACLG00000026754	srek1	63	88.235	ENSACIG00000015041	srek1	99	88.235	Amphilophus_citrinellus
ENSACLG00000026754	srek1	67	88.776	ENSAOCG00000024379	srek1	50	88.776	Amphiprion_ocellaris
ENSACLG00000026754	srek1	68	87.940	ENSATEG00000009450	srek1	50	89.286	Anabas_testudineus
ENSACLG00000026754	srek1	94	81.004	ENSAPLG00000003948	-	69	81.004	Anas_platyrhynchos
ENSACLG00000026754	srek1	95	81.560	ENSANAG00000031358	SREK1	90	83.333	Aotus_nancymaae
ENSACLG00000026754	srek1	96	83.448	ENSAMXG00000043877	srek1	58	83.448	Astyanax_mexicanus
ENSACLG00000026754	srek1	94	81.851	ENSBTAG00000007321	SREK1	90	83.333	Bos_taurus
ENSACLG00000026754	srek1	95	43.478	ENSCJAG00000017704	SRSF11	51	45.907	Callithrix_jacchus
ENSACLG00000026754	srek1	97	80.069	ENSCJAG00000015950	SREK1	90	83.333	Callithrix_jacchus
ENSACLG00000026754	srek1	94	81.495	ENSCAFG00000007560	SREK1	51	60.563	Canis_familiaris
ENSACLG00000026754	srek1	59	74.302	ENSCAFG00020019448	-	90	74.302	Canis_lupus_dingo
ENSACLG00000026754	srek1	95	43.165	ENSCHIG00000025295	SRSF11	79	66.667	Capra_hircus
ENSACLG00000026754	srek1	94	41.455	ENSTSYG00000033270	-	67	66.316	Carlito_syrichta
ENSACLG00000026754	srek1	94	81.851	ENSTSYG00000036957	SREK1	90	83.333	Carlito_syrichta
ENSACLG00000026754	srek1	94	81.495	ENSCPOG00000008925	SREK1	53	80.000	Cavia_porcellus
ENSACLG00000026754	srek1	94	81.495	ENSCCAG00000020591	SREK1	90	83.333	Cebus_capucinus
ENSACLG00000026754	srek1	96	80.488	ENSCATG00000031482	SREK1	90	83.333	Cercocebus_atys
ENSACLG00000026754	srek1	94	72.242	ENSCHOG00000004956	SREK1	50	71.034	Choloepus_hoffmanni
ENSACLG00000026754	srek1	97	78.523	ENSCPBG00000026866	SREK1	88	78.041	Chrysemys_picta_bellii
ENSACLG00000026754	srek1	94	47.735	ENSCING00000022892	-	69	47.917	Ciona_intestinalis
ENSACLG00000026754	srek1	95	81.560	ENSCANG00000030421	SREK1	90	83.333	Colobus_angolensis_palliatus
ENSACLG00000026754	srek1	62	89.011	ENSCVAG00000002411	srek1	88	89.011	Cyprinodon_variegatus
ENSACLG00000026754	srek1	96	84.912	ENSDARG00000009764	srek1	55	84.912	Danio_rerio
ENSACLG00000026754	srek1	61	78.142	ENSDORG00000023425	-	92	78.142	Dipodomys_ordii
ENSACLG00000026754	srek1	99	39.203	FBgn0024285	Srp54	55	38.816	Drosophila_melanogaster
ENSACLG00000026754	srek1	65	53.846	ENSEBUG00000014055	srsf11	54	53.846	Eptatretus_burgeri
ENSACLG00000026754	srek1	95	43.165	ENSEASG00005007847	SRSF11	82	66.667	Equus_asinus_asinus
ENSACLG00000026754	srek1	61	78.142	ENSEASG00005006829	-	92	78.142	Equus_asinus_asinus
ENSACLG00000026754	srek1	61	78.142	ENSECAG00000036994	-	92	78.142	Equus_caballus
ENSACLG00000026754	srek1	96	81.017	ENSELUG00000008230	srek1	55	81.017	Esox_lucius
ENSACLG00000026754	srek1	79	78.571	ENSGALG00000043541	SREK1	93	80.672	Gallus_gallus
ENSACLG00000026754	srek1	97	78.523	ENSGAGG00000006087	SREK1	62	88.889	Gopherus_agassizii
ENSACLG00000026754	srek1	96	80.488	ENSGGOG00000004737	SREK1	90	83.333	Gorilla_gorilla
ENSACLG00000026754	srek1	63	100.000	ENSHBUG00000007057	srek1	100	100.000	Haplochromis_burtoni
ENSACLG00000026754	srek1	61	81.356	ENSHCOG00000017240	SREK1	53	81.356	Hippocampus_comes
ENSACLG00000026754	srek1	96	83.099	ENSIPUG00000016851	srek1	55	83.099	Ictalurus_punctatus
ENSACLG00000026754	srek1	94	81.495	ENSSTOG00000008850	SREK1	90	83.333	Ictidomys_tridecemlineatus
ENSACLG00000026754	srek1	61	78.689	ENSJJAG00000000214	-	92	78.689	Jaculus_jaculus
ENSACLG00000026754	srek1	61	88.764	ENSLBEG00000022980	srek1	90	88.764	Labrus_bergylta
ENSACLG00000026754	srek1	94	81.495	ENSLAFG00000013853	SREK1	59	61.290	Loxodonta_africana
ENSACLG00000026754	srek1	96	80.488	ENSMFAG00000039823	SREK1	90	83.333	Macaca_fascicularis
ENSACLG00000026754	srek1	96	80.488	ENSMMUG00000014586	SREK1	83	83.516	Macaca_mulatta
ENSACLG00000026754	srek1	96	80.488	ENSMNEG00000030723	SREK1	90	83.333	Macaca_nemestrina
ENSACLG00000026754	srek1	96	80.488	ENSMLEG00000039078	SREK1	90	83.333	Mandrillus_leucophaeus
ENSACLG00000026754	srek1	95	43.525	ENSMAMG00000015002	-	93	62.136	Mastacembelus_armatus
ENSACLG00000026754	srek1	63	100.000	ENSMZEG00005005719	srek1	100	100.000	Maylandia_zebra
ENSACLG00000026754	srek1	94	80.427	ENSMAUG00000010066	-	57	78.333	Mesocricetus_auratus
ENSACLG00000026754	srek1	94	81.495	ENSMICG00000034959	SREK1	90	83.333	Microcebus_murinus
ENSACLG00000026754	srek1	94	80.783	ENSMOCG00000001536	-	56	78.333	Microtus_ochrogaster
ENSACLG00000026754	srek1	61	87.006	ENSMMOG00000008409	srek1	91	87.006	Mola_mola
ENSACLG00000026754	srek1	97	89.399	ENSMALG00000017086	srek1	98	91.954	Monopterus_albus
ENSACLG00000026754	srek1	94	43.273	MGP_CAROLIEiJ_G0025767	Srsf11	86	69.767	Mus_caroli
ENSACLG00000026754	srek1	94	43.273	ENSMUSG00000055436	Srsf11	85	69.767	Mus_musculus
ENSACLG00000026754	srek1	94	43.273	MGP_PahariEiJ_G0027217	Srsf11	86	69.767	Mus_pahari
ENSACLG00000026754	srek1	94	43.273	MGP_SPRETEiJ_G0026719	Srsf11	86	69.767	Mus_spretus
ENSACLG00000026754	srek1	61	76.503	ENSNGAG00000017527	-	92	77.596	Nannospalax_galili
ENSACLG00000026754	srek1	63	97.312	ENSNBRG00000010718	srek1	100	97.312	Neolamprologus_brichardi
ENSACLG00000026754	srek1	96	80.488	ENSNLEG00000003827	SREK1	90	83.333	Nomascus_leucogenys
ENSACLG00000026754	srek1	94	81.139	ENSOPRG00000012111	SREK1	52	80.277	Ochotona_princeps
ENSACLG00000026754	srek1	97	95.406	ENSONIG00000011080	srek1	66	95.406	Oreochromis_niloticus
ENSACLG00000026754	srek1	82	81.967	ENSOANG00000005029	SREK1	53	81.967	Ornithorhynchus_anatinus
ENSACLG00000026754	srek1	95	45.683	ENSORLG00020009393	-	89	59.804	Oryzias_latipes_hni
ENSACLG00000026754	srek1	95	45.683	ENSORLG00015009374	-	89	59.804	Oryzias_latipes_hsok
ENSACLG00000026754	srek1	61	86.339	ENSORLG00015020471	srek1	94	86.339	Oryzias_latipes_hsok
ENSACLG00000026754	srek1	96	79.359	ENSOMEG00000015817	srek1	57	79.359	Oryzias_melastigma
ENSACLG00000026754	srek1	96	80.488	ENSPPAG00000031605	SREK1	92	78.142	Pan_paniscus
ENSACLG00000026754	srek1	94	80.783	ENSPPRG00000024617	SREK1	85	83.529	Panthera_pardus
ENSACLG00000026754	srek1	94	80.783	ENSPTIG00000006608	SREK1	85	83.529	Panthera_tigris_altaica
ENSACLG00000026754	srek1	96	80.488	ENSPTRG00000016936	SREK1	90	83.333	Pan_troglodytes
ENSACLG00000026754	srek1	96	80.488	ENSPANG00000008953	SREK1	90	83.333	Papio_anubis
ENSACLG00000026754	srek1	98	86.552	ENSPKIG00000025563	srek1	55	86.552	Paramormyrops_kingsleyae
ENSACLG00000026754	srek1	62	82.778	ENSPMGG00000017031	srek1	100	82.778	Periophthalmus_magnuspinnatus
ENSACLG00000026754	srek1	94	80.783	ENSPEMG00000024051	-	58	78.333	Peromyscus_maniculatus_bairdii
ENSACLG00000026754	srek1	61	77.901	ENSPCIG00000017750	-	92	77.901	Phascolarctos_cinereus
ENSACLG00000026754	srek1	61	89.266	ENSPLAG00000008827	srek1	99	89.266	Poecilia_latipinna
ENSACLG00000026754	srek1	59	88.889	ENSPREG00000019912	srek1	98	88.889	Poecilia_reticulata
ENSACLG00000026754	srek1	94	81.495	ENSPCOG00000026230	SREK1	90	83.333	Propithecus_coquereli
ENSACLG00000026754	srek1	96	85.714	ENSPNAG00000004328	srek1	57	85.714	Pygocentrus_nattereri
ENSACLG00000026754	srek1	94	81.495	ENSRBIG00000033818	SREK1	90	83.333	Rhinopithecus_bieti
ENSACLG00000026754	srek1	94	43.273	ENSRBIG00000042971	SRSF11	66	69.767	Rhinopithecus_bieti
ENSACLG00000026754	srek1	96	80.488	ENSRROG00000017210	SREK1	90	83.333	Rhinopithecus_roxellana
ENSACLG00000026754	srek1	96	80.139	ENSSBOG00000031230	SREK1	90	83.333	Saimiri_boliviensis_boliviensis
ENSACLG00000026754	srek1	94	43.273	ENSSBOG00000033461	SRSF11	78	63.366	Saimiri_boliviensis_boliviensis
ENSACLG00000026754	srek1	98	85.517	ENSSFOG00015004995	srek1	54	85.517	Scleropages_formosus
ENSACLG00000026754	srek1	96	88.339	ENSSMAG00000011808	srek1	59	88.693	Scophthalmus_maximus
ENSACLG00000026754	srek1	95	43.885	ENSSLDG00000012105	-	93	62.136	Seriola_lalandi_dorsalis
ENSACLG00000026754	srek1	95	79.433	ENSSPUG00000016553	SREK1	90	79.433	Sphenodon_punctatus
ENSACLG00000026754	srek1	61	89.326	ENSSPAG00000022298	srek1	99	89.326	Stegastes_partitus
ENSACLG00000026754	srek1	62	82.778	ENSTRUG00000002960	srek1	98	82.778	Takifugu_rubripes
ENSACLG00000026754	srek1	96	87.814	ENSTNIG00000013463	srek1	69	87.814	Tetraodon_nigroviridis
ENSACLG00000026754	srek1	61	78.142	ENSUAMG00000022661	-	92	78.142	Ursus_americanus
ENSACLG00000026754	srek1	50	83.784	ENSVVUG00000005890	-	91	74.444	Vulpes_vulpes
ENSACLG00000026754	srek1	96	74.013	ENSXETG00000021460	srek1	61	74.342	Xenopus_tropicalis
ENSACLG00000026754	srek1	62	88.462	ENSXCOG00000017793	srek1	99	88.462	Xiphophorus_couchianus